| Id Trinity | FTRINITY_DN57259_c0_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_53853 |
| Sequence | AAAGAACGTGTCAGTAGTTGGGGAAATGGAATTGGCCCTAACCTTAGCTTTACATCTTTGAATAATTTTTTTTCTTAAAAAAGCTGTGAATAAATAAATG CATAAAAGCCATTTCTCTTTCTTTTCCAAAATATCACCCATTTTTTAATTGGATTCAAATTAAGAACCTGCATCCACACTCATTTATTAATTCACCTTTA TTAAATTTCCAAGACGGACGTGAAACAATTTCTAAACCAAAATTTATACTTTCAATTTTCTACTTAAAATAATATTAATTAAATTCCCATTATTTAATCA CTTTATTGTTTTAAAAAATCTATTATATTCTCCATTTTTCCAACTTTATTTAGTTACTCAACCTTTTCCTGCAAAACCCTAATTTTCTTATATCACGCTG GGCAATTTATGAACTAGAGTGTTATTTTTCTCTGTAATTATAGAATTTATTTTTAAAAAAATTGTCTTTATTTTTTTTCTGAAGCTCTTTGTGTTCTCTG CAATGGTGGAGATTTGAGCTACAGTACTGTGTTTTTCTCGGAATTCAACCTCAACCGTTGAAAATTCAAAAAATTCTACTTCTGGGTTTTCATCCCTTTG CAAAAAAGTTTGTGTTTTTGAAGTTTTTTGTGCAGTAACAAATTCCCCTCAGCTCAAAGTCTTAAACGTCTTTCTACTGTTTTCTGGGTATCTTTAGTTC TGCATTCAAATCTATTTAAGTTTTAAAAAGAATCGTCAATGGGTAGGGTTTAAGTGTTTTTTTGTTGAGGTTTTTGTCTAATTTTTTCTCTGATCAGCAT AAAAATGGAGGAAAGAGAGATTTTTGGTTCTGAGCATGTGGTTAAGGGTAATGAGGCCACAGATAGCTTCCACGTGGCACCGAGAACAGAAAACGTGGTG CAGTTTCCCGGCACGGCGGTGGAGTTGCCTGATGTGGCGCTGGTAAGCACGGTGGTGACACCAGGAACTGCAGGGAAGAAGAAGAGGGGCAGGCCTAGGA AGTATGGACCGGACGGCAAGGTGGCAGCAGCAGCCATGGCCCTCTCGCCGATGCCGATATCAGCGTCGATTCCATGGACCGGCCAGTTCTCAGCTTGGAA AAGGGGTAGAGGGAAGTCTGTTGAATCAATGAAGAAGTCAAACTTTTATGAAGTTGAAAATGCTGGACCAGGTTATGGAATTGCATGTTCTGTTGGTGCC AATTTCACTCCTTACGTGCTTACAGTAAATGCTGGCGAGGTATTCTCTGCAGTTTGATTATAGTTTTACTCCCATCAATTTTGTCCCAATGTAATATTCA GAGAAAATGCAAATTCCGTTTATTTTGCTAATTAAATTCCGTACTTTTAAAAATACAATATTATATTTAGCTTAGCTCTTAGTTATCTTTTAGCTCATAT GATATTTTCCTTTCTATATTACTCACTGTATTTATGCTTTAGTAAAGCAGTATTGGTGTATATAATTGAATGTTAAACATATACAAAATTAGCCTTTTGG AATCAGTTTGGTTCTGCTCAGAGTCAGAAATTGTGAAGTTGTAGAAACTTAGCCTGGAGGAATTGGAGAAAAGGATAAAGAAAGATAAATTATCATTTTA TTGGTTTAAGTTTGTTATGTTCACATGTGTTGGCTATTCCTTTGAAGTTCATACATGTAGTTACTAAAGCTGCGCTGAAAGGTAACTCGTGTAATAGATA ATGTATGCATAAATTATGAACATAGACATCAACAGTTTAATTCTGTTATAAAGAGGAGGAATAAATATTGTTAGCTACAATATATAGTAGTGACATAATA TTGTGAAGCTTATATTTCAGTATTACTTGGATCAAAACTTAGGTTCTGCAGAGGATGGTTATTGCTTATTAATGAAAGTAACCTAACATTCACTTTGTTG TTTTTATAATTATTATTGCTACATTGGGTGCTTATGTGCATTTGTGATTTCCCTTATCCTATGGCGTATTTCAGGATGTTACTATGAAGATTATGTCCTT TTCTCAACAAGGATCACATGCTATATGCATTCTCTCTGCAAATGGCATGATTTCAAATGTTACACTTCGTCAACCGACTTCTTCAGGGGGTACCCTAACA TATGAGGGACGGTATGAGATTCTTTCCTTGTCCGGTTCTTTTATGCCAACTGAGAATGGAATTGCGAGAAGCAGATCTGGTGGGATGAGTGTCTCTTTGG CAGGTCCGGACGGTCGAGTGATGGGGGGTGGACTTGCTGGTTTGCTGATAGCTGCAGGACCTGTGCAGGTAAGCCTCATGCTATAAAGTGAGGAAGTTCG AAAAAATATTCCAGAACTTTATGGAACTGTTAATATGATGTTTTCTGACCTTTGCAAGGAGATAGTGCAACTGTGCAAGTGCTAGTTGTTCAAATTGTTC CCATAATCTTAAAGCATTATTTTTAATCTGGTACATTTTTTTTTATTAGATTACCAATGCCCTTGGATAGGAATTATATTTAACTATCTTCATGCCATAT CGATTCCCCTGGGAAAAAAAAGCAGATCACATGCAATTTGAGAAATAAGAACCAAATTACATGTATGAAGGGCATGTCAGTCATGGTTATGTTGTTTGCA CATCAAACTTTGTCATCACTTTCACAACTACCACTGTTTTATACTTCATTAATTAAAATAATTTATTTTTATATCGATTTACACAAATCCGTAGAACTCT ACCATGCCTTATGTATGTTGTCTAACTTGCATATCAAAATAACAACACACATTTAGTAACAACATCTCTCATTGTCTTTTGCTTCAGGTTGTTGTGGGCA GTTTTCTTCCTGGTCACCAGCTGGAGCATAAACACAAGAAGCAGATGGTGGAGCATGTATCGGCTATTACCCCGACACATGCTAATCCTATCTCTAATAA TGATGGAATAAAAATCAGTTTTGGTGGATTTAAGCCTATTATGACACCTGCTGCTTTTCAAGAACAGAATATAGCTTCTTATAACAATGTTCAAGACTCT AGGAACTCATCTTCTGATGATAAAGAACCTTTCGCCGAAAAGGAGTATAATCCAAGCCAATAAAATGCCTGATGTTGCCTGTTAGTCATGTTCCCTGTGA ATTGTATCTTATTCTGCTGAGTCAACCTCATCTAGGCTCACTCGTTCTCGAATGACACTGACAATTAACATACACAAACGACAGAACTCTGATAGTCGGG TGAGTGCGCGATGGTTTTGACTCGAAAAGTTGCACTCTTTGGTACTAGGGTGTTAGTTAGGAAATATATTTGCATGGTTTTTATGTGTCTTTTTTGCTGA TGTAATCTCTAGTGGTGTTTACTCGTTGTTGTAGGCTTGTAGGGTATATGTTGTGCCATTTTCTCTACATGGATGTTAAAAATGTGAGTGTTTCTGAACT GTGTAACATAACAATATTATTTGTTGTGAAAGAAGAAATTGCATATCAGCAGGAAGCCAGAAACTAATAGAAATCTCTAATGGATACCAAAATGTCTCTG TCCCATGTCCAAGTCCAATAATATGTCATGAAGTAATATAAAATATTGGTTTACTTTTTTATAACTTTTTTACAATTAAATGATGTATTCTGATTAGTTT GAGACACCAATAGGGGCACCATTGGAGACAGAAGATCTCCAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_67182; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_53853
| Blastp | AT-hook motif nuclear-localized protein 3 from Arabidopsis with 54.74% of identity |
|---|---|
| Blastx | AT-hook motif nuclear-localized protein 1 from Arabidopsis with 80% of identity |
| Eggnog | Domain of unknown function (DUF296)(ENOG41114DS) |
| Kegg | Link to kegg annotations (AT4G25320) |
| CantataDB | Link to cantataDB annotations (CNT0000128) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019449431.1) |
| Pfam | AT hook motif (PF02178.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |