Ll_transcript_53870

• Id Trinity: FTRINITY_DN57259_c0_g1_i16
• Name Transcript: Ll_transcript_53870
• Sequence: TGGTGGTACTTTAACATATGAGGTCAGTTCAGTTTTATGACATTAGCCTGAAAAGAAAAGGAGTTTTTCCTATGTTTCTTTATCAGCTGATGTACAAGTA ATGTTAAGGGGTTACCTAATACTTTTAACATTAATGTACTTGTTTTATCTGCTGCTCTCTCTCTCTTTCTTTCTGTCCTTGTGGGTATTACATAATTTAA GATATCAAATGTTATTTTCTTACAAAACAAATGTTTGTTTTAAAATGTCCCTTCGTTTATATGCTGGGGCTTCGTTGGTTTTTATTGAGGGATATTAGAT GGTACATAAAAATATGGATGTGTTGACTGCGAACTTTAGAATTTTGTAGAAATTAAATTAAGGTATTTGCATGCTATAGAGTTTTGTTGAATTTATTTTG GCAATTGTGTGAGGATAATAGCCTCTGTTATGTGATTTGACTTCTTTTCAATATTCTCTAAGCAGAGTTTTTAGTTATATTCATTAGGTCATGTGGTAAG AGGTACCCATATTTTTATTGTTATTAATGTTGATGGTTATTCCAAGTCTTTGATTTTGGATGTGAGAGTAGAGTTGGCAAAACCATTGCTTCCATGATTA TAGATCCGACAAGCTTTTTTCTTATATTAATAATTTCCAATTCAATATTGATCCTATGGCTTATTTTTTACACTTTCCATGTTTGCCATATGTCTCGGAT ATGGCTTGGACCATGTTTTATGCTTCTTGACAACTCATGTCTCCTTCCACATCATTCTTCTTTTAGATATCAAGTCACCATCCTTCTTCTTTATTAATTC ATTCTAGTTCACAGTTCACACTGAATTCATTTACAACTATATTCTCATTTCACTTAGTTATGGCACTAGGTGAATGCAGTAAATATGATGTTGCTTATTT GGTTCTTTTGCAGGGACGATTTGAGATTCTTTCATTGTCTGGTTCATTTATGCCAACGGAGAATGGATTCATAAAAAGCAGATCTGGCGGGATGAGCGTC TCTTTGGCAGGTCCGGATGGTCGTGTAATGGGGGGTGGACTTGCCGGTTTGCTGGTAGCTGCAGGTCCTGTGCAGGTTGTTGTGGCCAGTTTTCTTCCAG GTCAACAGCTGGAGCAGAAATCGAAGAAGCCAAGGATAGAACATATATCAACTACTGCACCAACACATGTTAATCCAATTTCTGCTGAAGAAATAAAAAT CAGTTTTGGTGGAGTAAAGCCTATTATGATGACACCCGCCGCTTTTCAAGTAGACAACAACTACGGTTCTTATAACAATGTTCAAGGTTCTAGGAACTCA TCTGCTGATAATGAAGCACCTTTGCAAGAGAAGGGTTCTAACCCCAGCATATTAGATGCTGGGGGAGTTGCATGCTAAAGACATGGTTGGTGCTGACAAT TAACCTAAGAAGATGAGTGCTATAATGGGATGATGTTATGTTTGTTATGGTTAAGAGATTGTACCCTGTGTTGGTACTAGCTGATTTTATTATATATAAG GCTTTGTTGTCTGCTCTCATAATGTGTCTTTAATATTGTTTACTCATTATTGTAGCAATTAGATGTAGGAAATATGTGATGCCACGTTTTTAGTTATTTA CATCATTCTATAAGAACAATTGGAATGAGATTATGTGTTCATTATGTTGTCATGTTGGTTTTGTGACTGTAGCAAATGGTATTGTTTGGTGTGAAAGAAG AAATTACATTCAGCTTTTAAAA
• Tissue: flowers
• Gene name: LI_gene_67182;
• Additional information: details;

Expression of Ll_transcript_53870

FPKM

• FPAB: 0.3
• FPNAB: 0.6
• LF1: 0.3
• LF2: 0.1
• LF3: 0.4
• LF4: 0.6
• UF1: 0.2
• UF2: 0.2
• UF3: 0.1
• UF4: 0.3

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_53870

• Blastp: AT-hook motif nuclear-localized protein 6 from Arabidopsis with 46.26% of identity
• Blastx: AT-hook motif nuclear-localized protein 6 from Arabidopsis with 47.22% of identity
• Eggnog: AT hook motif domain containing protein, expressed(ENOG410YFD3)
• Kegg: Link to kegg annotations (AT5G62260)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019449431.1)
• Pfam: Domain of unknown function (DUF296) (PF03479.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;