Ll_transcript_53854

• Id Trinity: FTRINITY_DN57259_c0_g1_i2
• Name Transcript: Ll_transcript_53854
• Sequence: AGTCTGTTGAATCAATGAAGAAGTCAAACTTTTATGAAGTTGAAAATGCTGGACCAGGTTATGGAATTGCATGTTCTGTTGGTGCCAATTTCACTCCTTA CGTGCTTACAGTAAATGCTGGCGAGGATGTTACTATGAAGATTATGTCCTTTGCTCAACAAGGATCATCTGCTATATGCATTCTCTCTGCGAATGGCTCA ATTTCAAATGTTACACTTCGTCAACCAACTTCTTCAGGGGGTACTCTAACATATGAGGTGAGTTCAATTTTTGGTCATCGGCACAAAAAGAAAATGAGTC TAGTATTACAATTGCATGTGGCTTATAAGCAGCCAAGTTTATCTGATATTTTATGTACTACTTGGTGTTAGATATCAAATGTTAATTTTGTAGATGCGCC GTGAAAGGTGGTGCTTCATTTCTGTCCCGAGTTTTTCTTCTTCAGAAAGAAGGGTACTGTAGGATGTTAACATGTTACAATAATTAGTTATCAAGTCAAT TGGTTGCTTTAACAGTGTAGTAACAGTGAATGTTGATGTGAAATAGAAGGATTGCGGTTAACTGTTATTTCTCTCTCTTATCCATGAACTCTAGATTTGA CATGTTTTTAGTTCTCGGCTAAGTTGTTTGAGAATTTTTGTCATAGCTGTGTGCTGAATTGCATGAGCACTATGGATGAATGAATGCCTTTTAGTTTTCA TGTGTTTCACTCATTTACAGGGACGGTTTGAGATTCTTTCCTTGTCTGGTTCCTTTATGCCAACTGATAATGGAATTGCGAGAAGCAGATCTGGCGGGAT GAGTGTCTCTTTGGCAGGTCCAGATGGCCGAGTGATGGGGGGTGGACTAGCTGGTTTGCTGATAGCTGCAGGTCCTGTGCAGGTAAACCTTGTGCTAATA TTTTAGAACCTTGTGAAATTGTTAATATGAAGTTTTCTATCCTCCGGAAGGAAATAAGATAGTGAGTTCTCCTTGCTCAAATTGCTCCCATCATTGTAAC ACAATAGTTTTTTTATCTGTTAAGTTTTTTATTAGATGATCAATGCTCAGATTAGAATTATAATTAACCATATTCATGCTATATGAATGCTCCCGAAAAA CCGAAGAGGCAGACAACATGCAATTAGAAAACAAGAACCAAATCGCGTGTATTAAGGGCACATCAGTCATGGTAATGTTTTTTTTGTACATCAAGCTTTG ACATCAATTTCTCAGCTTCCACTTTTACTACATTATTCATTAAAACAATAGTTCATTTTTAATATCAATTTACAAAAACAAAAACCACAAAAATCTATGG TGCCTCATGTGTGTTGTTTAACTTGGATGTCAAAATAACAGTGCTCTCAGTTACCACTTTTCTTACTGTCTCCGGCTTCAGGTTGTTGTGGGTAGTTTTC TTCTTGGTCATCACTTGGAGCATAAAAACAAGAAGCAGAGGGTGGAGCATATATCAACTATTACCACTACACATGTTAATCCTATCTCTAATGATGGCAG AATAAAGTTCAGTTTCGGTGGATTCAAGCCTATTATGACACCTGCTGCTTTTCAAGAACAGAATATAGCTTCTTATAACAATGTTCAAGACTCTAGGAAC TCATCTGCTGATGATAAAGAAGCTTTTCCGGAGGACTCTAATCCAAGCCAATAAAACGTCTGATGTTGCATGTTCTGTGAATTATTTGTTTTTCTTCAGA GTCAACCTCATTTAGGCTCACTGACGCTGACAATTAACGCACACGAACGATAGAACTCGAATAGTTGGGTGAGTGTGATGATTGTTTTGACTCGAAAATT TGCGCGGTGTTAGTTATCCATCTGTTTGTAGGCTTTCTGTGTGTCTGTTTTGCTGATGCCTCTCTCAAGTGGTGTTTACTTATTGTAGTAGTAGTTAGAC ATAGGGTATATGTTGTGCAATTTTCTCTATATGGATGTTATAAATGTGAGTGGAAGTGAGTGATTTTTGAACTGTAACTTAACAATATTATTTGTTGTGA AAGAAGAAATTGCATATCAGCAGGAAGCCAGAAACTAATAGAAATCTCTAATGGATACCAAAATGTCTCTGTCCCATGTCCAAGTCCAATAATATGTCAT GAAGTAATATAAAATATTGGTTTACTTTTTTATAACTTTTTTACAATTAAATGATGTATTCTGATTAGTTTGAGACACCAATAGGGGCACCATTGGAGAC AGAAGATCTCCAC
• Tissue: flowers
• Gene name: LI_gene_67182;
• Additional information: details;

Expression of Ll_transcript_53854

FPKM

• FPAB: 0.2
• FPNAB: 0.2
• LF1: 0.2
• LF2: 0.3
• LF3: 0.6
• LF4: 0.1
• UF1: 0
• UF2: 0.3
• UF3: 0.4
• UF4: 0.4

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_53854

• Blastp: AT-hook motif nuclear-localized protein 3 from Arabidopsis with 66.28% of identity
• Blastx: AT-hook motif nuclear-localized protein 1 from Arabidopsis with 69.33% of identity
• Eggnog: Domain of unknown function (DUF296)(ENOG41114DS)
• Kegg: Link to kegg annotations (AT4G25320)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019441135.1)
• Pfam: Domain of unknown function (DUF296) (PF03479.14)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;