Ll_transcript_52541

• Id Trinity: FTRINITY_DN57273_c0_g5_i3
• Name Transcript: Ll_transcript_52541
• Sequence: ATTAAATAAACGGATAATGTGGCTTTTCAGTATCCATTACTAGCTAAAGTTTTTCCCTTCTTCTCTCCTCTCTCACCAAGTTTCTAACTTCTAACTTTGC TGTGGTTGGTTTTATCCGAGTCTTCCAGAGAGAGAAACAGAAAACATGCTTCGGAGAGATCTAGAAAGTGGTGTTGAAACAAAGGACAACAGAGCACTGA ACAACAGCAATTTCAACAATTACTCTGCTGCTCCTAACTCTTATGTTTATGATCCAGAAACCCATTGGACTTCATGGCTTGTACCTGTGTTTGTGTTGGC AAATGTTGTTGTTTTCATTGTTGCTATGTACATCAATAATTGTCCCACCAAAAATCAAGGTGATTGTGTGGCCAAGTTTCTGCATAGGTTCTCCTTTCAG CCTCTGTCTGAGAATCCATTGTTTGGACCCTCTTCCTTAACATTAACAAAGATGGGAGCCCTTAAGTGGGATAGTGTTGTGAATCATCGTCAGGGATGGA GACTTATTACTTGCATTTGGTTACATGCCGGACTTATTCACTTAGCTGCAAACATGTTTAGTCTGATCTTCATCGGCATTCGCCTTGAACAGCAATTTGG ATTTGTGAGAATAGGCATCATCTACCTTTTGTCTGGATTTGGTGGCAGTGTGTTGTCTTCTCTATTTATTAGAAACAACATATCTGTTGGTGCTTCTGGT GCGCTTTTCGGACTTCTTGGAGCAATGCTTTCTGAACTGATCACAAATTGGACTATTTATTCCAACAAGGCAGCGGCTTTGCTCACACTCTTGGTTATTG TTGTCATCAACTTGGCCATTGGGATATTGCCACATATTGATAATTTTGCTCATATCGGGGGATTCCTAACAGGACTTCTTCTTGGTTTTATTTTGTTAGC CCGTCCTCAATATGGGTGGTTAGAGCAGCGGCATCTTCCTGCTGGTGTTCGGCGGAAGTCTAAGTTCAAGGCTTACCAATACACACTATGGATTGTCTCT CTTGTTCTATTGGTTGCTGGGTTAGTGATTGCTTCTGTGATGCTATTCCGGGGTGAGAATGGTTATGATCACTGTCATTGGTGTCACTACCTATCGTGTG TTCCAACTTCTAAATGGAAATGTGATGACAGTTAAACAAAAAGGCATGAGCTATTCATGTTCCATGTAAACTATAGCTGTTACAAACTAGGTTGTTATAT TACTTTTTTTCTTTGCTAAGTTTTTAAAAAAAAAACAGATATTGGTTTGTCTTTGTGGATTTATGTGTATATGTATGTTTTCTTTCATATATATATAAAG AAATATTGAAATCACTGGTTTTCCTTGATATACCATGTAAACCTGCTTAGTCCATATTGTAATAAGTTCTGAAAGCATTGCCAAGTCCAAAAGCAGTACA AGAAATGTCTAAAAAATAGAGCAGAAAGCAACAACTAAAAAGGGTGGTCCAATCTAGGAGGTTCCACTTAGTGGGATATGTGGAGAGTACAGATATAGAC TTATACATAACTTAGCAATCGAATGTTGAGAGTAATATTTATCCATGGGATAGGCAGTGTAAAAATTTATAGATAGTCAGTGCATTATACACCATTCATT TGGATTACTTTTGTTGAAAAGTCAAGAATGATTGAAATAAAGTACAAG
• Tissue: flowers
• Gene name: LI_gene_67300;
• Additional information: details;

Expression of Ll_transcript_52541

FPKM

• FPAB: 24.4
• FPNAB: 18.8
• LF1: 27.9
• LF2: 56.1
• LF3: 43.7
• LF4: 43
• UF1: 28.2
• UF2: 42.7
• UF3: 58.5
• UF4: 64.6

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_52541

• Blastp: RHOMBOID-like protein 3 from Arabidopsis with 72.97% of identity
• Blastx: RHOMBOID-like protein 3 from Arabidopsis with 72.97% of identity
• Eggnog: rhomboid family(COG0705)
• Kegg: Link to kegg annotations (AT5G07250)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019449627.1)
• Pfam: Rhomboid family (PF01694.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;