Id Trinity | FTRINITY_DN57277_c0_g2_i18 |
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Name Transcript | Ll_transcript_55319 |
Sequence | TGACCACCCAAATATTTCAATATGAAAGAATATTAAAACTGGACCTCATTGAACACATGCTCTGCCACATTAATGTAAAGAACTAGCACACTCGAAAGGG AAGGTCTTTTTCGAGTCTGAGGATTTTAGCATGGAGTTCTTCTTTTTGCCTCTGGATGAACAGGTATTCAAATAGCATTAATTCTATGTGATTGTGATGC TGACAGTGACGTTTTTGGCCATTAACAAAGCTTAAGATAATATACACAGGTAACAAACCTTTTGATCTTCAGCTTGTTTCAAAATGTTTTCATCAGCTTT CTGTGGCTCCATAGAAGCCATCTGAAGAGAGCTATTTTTCACTGCATTCTGAAAAGACAATAAATTCCATCAATGGTAAAAGAAGCCTTCTACTAACGTT TTAAGGACAGCATTACAATGGAAGGGTGTATAAGATAGCATGAATAAGTTATGTTAAATTCTTGGTTTACAAAATCATTAGGCAAGATCCTCAATGGAAG GGAAAGGATTACAGGAAAATTAGATAAACCATTACAGGAAAATTAGATAAACCCCTCCCTAGTATGAGGTTTTTTTGACAAACAACTCTTGACTGATGAG CAACTTTATCCCACCCCTTCCTAAATTCCATCTCATTAAATGCATAACATATGACCACTCTGACAAAAAAAAATAGAGTTTGCATTATTAATTATTATTC AACAAAAACTATTAAATATTGGTCCATCCATTCTACTCTCTCTCCATGTCACACTATAAAAACTGGTCCATCTATTTTGCAGTTAAAAATAAAAAGTAGT ACCCTTAAATGATTTTTATTCCTCCAATCTTAATTTCACAGGAATCTCAATCAAAGCATGCTAGAGGAGATGTAGCAAAAACCTAAAAAATACTATACCT CCTCTGTCTCTTCTTACAACTTTATTCTTTCACTTTCATTATGTGTCTCACGCTTCTCCAATTCTATTTTATGCAAGTAAAGGTAATTTTTATGGGTTTT CGGTTGCATCTTAAGCATTCCATGATCACTAAAAATCTTTGGAAGTGATCCCACTTTATACAACATTTTCTGCTTTGAAGTTTACAGAGGTTATTTGAAG GTAATGCATACATTGCTTGGACCTCACTTTATATTTTTACAAGGTAAATGTTCTAAAACCTTGGTTTGTGAGAATATTTTGGATGGACCACAACCAATGG TTCAGGAAATTTTCACTCGTTTATAGTGCAATAATAAGTTAAAATTGTTAGTTATTAAAAATCAACTATGAAAATGTTTTTGGGCCATTGGCCTAGTAAG TAGTAATATCCTATATTTCTCCCTATATTGGTTTAGTATGGCCATCAAATCTCCAACCATGACTTATTTTAAAAGATTTGATTGTCATGTATGTTGAGTT ATTCCCCAAAACATTATTTAACATATATGTTAGGTTATTCCTCAATACTTCATTTAGCATGTTAGTACTATCTTTCCTAGTTTGTGTCGGTTGTAGCCAA AATTTCAACCATGCCTTATTTTTAAAAGATTACTTAGTTGTATATAGGAGTTGGGTGCTCAGAGTGAGGCCTTTGATGTGGCCTGCACTTAGATTTTCTA GCAGGTTATTCTTTGAAGTCTGTGATCTTTAACATGTGGTGGATGTTATAGATTTGATAAAGGTAAGGTCTCGTGGTTGTCACAGATGGGGAAATATTAT GGATGAGTCTATCGTGCGAATTAGATTTTATTTCGCTACAAAGCAAACTAGTGTTCTAGTCTTTGGATGTAATGTTTATGCATGGGAAAAAGGATTGGCA TTTGAAAAAGCATATGAATCCGATCATGGGAAACCCACGCATAAACACCAGACTTCTCCCCCGGAGCAAACCAATCCTTTTTCCCATGATGATGTGAGTC ATATGCTTTTTCAAATGCCAATGCATTGTGGAAGCCTGGCCAATTTTTATTGAATTCTACAAGAGCAGTCCAGTCTGGACTTTATGCGCGGGTTTCCCAA GCAGATGACTACAAAATGAACAATATCATCGGGGAAAATTTGAGAAAGATGGGGATGTTAAAACTATATCTGAACTTCAGGAAGAAGAAGACCAAAAGCA GCATAAACTGGTATCTAATTTGCATAACATTATTCAGGCCAAGAACCAGCACTTAAAAGAGATAGAAGTAAGATGCAATGAGACTACACAGAAAATGGAC GTTGCGATGGGGGAAAAAGATAAGCTCATTCATGCTTATAATGAAGAGATAAAGAAAATTCAGTCAAATGCTAGGGATCATTTTCAGAGGATTTTTAATG ATCACGAAAAGCTTAAGATGCAACTGGAAACCCATAAGAGTGACCTCGAGTTGCGGAAAATTGAATTGGAAAAGCGTGAGGCACATAATGAAAGTGAAAG AAAGAAGTTGGCAGAAGAGATGGAGGAGAATGCAGTGAAAAATAGCTCTCTTCAGATGGCTTCTATGGAGCAACAGAAAGCTGATGAAAACATTTTCAAA CTAGCTGAAGATCAAAAGAGGCAAAAAGAAGAACTCCATGCTAAAATCCTTCGACTCGAAAAAGACCTGGATATGAAGCAAAAGCTAGAGCTGGAGATTG AGCAACTACAAGGAAAACTAAATGTGTTGAAGCACATGAAAGATGATGATGAAGATGCAGAAGTTCTGAATAAAGTAGATAGTTTACTGAAGGAATTAAG AGAAAAGGAAGAAGAATTTCAAGACTTAGATGAAATGAATAACGCATTAATTGCAAAACAGCGTAAGAGTAATGATGAACTCCAGGAAGCTCGAAATGAG TTGCTTAATGGCATTCGTTCATTTGGTCAACTCCATCTTGTTAATTTCATTGGCTCAGTGAAGGTAGCAAAGTGACTTGAGGAAAATAAAAATTTCATTA AAGAAATGCCAAGTGGCGGCATTATTGGTGTAAAGAGAATGGGGG BLAST |
Tissue | flowers |
Gene name | LI_gene_67332; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_55319
Blastp | Protein INVOLVED IN DE NOVO 2 from Arabidopsis with 51.79% of identity |
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Blastx | Protein INVOLVED IN DE NOVO 2 from Arabidopsis with 49.64% of identity |
Eggnog | XH XS domain-containing protein(ENOG410YGHF) |
Kegg | Link to kegg annotations (AT3G48670) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019419285.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |