Ll_transcript_54803

• Id Trinity: FTRINITY_DN57298_c0_g1_i1
• Name Transcript: Ll_transcript_54803
• Sequence: GGTAGCGGCATTTCAAACTTGTAACAGAGAGAGAAACAAAGAGAGAGAAGAAGATAAAGATATCAACCCTCTCTTCACATAAAACGCAACTCTATATGAT GTTTGCAAAAGCTGAAGCTGGTGAGAAGAGTGGTGCTGGTAATCCTAAGAAGTTGGTGAAAGATGTTGAAACTATAAACAAAGCTCTGTACTTGGACAGA AATTCTTCAAAAAATTCAACACCTAGTGCAATTTCTCGATCTAAATCCACTTGGAAACCCCAATCACCTGAACCCAAATCAAGGCTCAAAGGTAGTACTA GTAGCAGTGGTAGTAGTAGCGGCAGAAGTAACGATAATGATAATTTGCAGAAGGATAAGAAGTCCATATGGAATTGGAGGCCACTGAAGGCCCTTTCGCA TATCCGAAATAAGAGGTTCAATTGTAGTTTTTACCTCCAAGTCCATTTGATTGAAGGGTTACCTTCCAATTTTGATGATGCTAGCCTTAGCGTGTCTTGG AAGAGGCGAGACGGTGTTTTGGTGACCCGTCCGGCCAAGGTAGTTCAAGGTGTGGCTGAATTTGAAGAGAAGCTGTCTTACACTTGCTCGGTGTATGGAA GTAGGAGTGGACCTCACCATTCGGCGAAGTACGAAGCAAAGCATTTTTTGCTCTATGCTTCTCTAATCACTGCACCGGAGCTTGATTTGGGGAAGCACCG GGTTGACCTCACGAGGTTGCTTCCTCTTACGCTAGAGGAGCTTGAAGAGGAGAAGAGCTCAGGGAAATGGACTACGAGTTTTAGATTGTCAGGAATGGCT AAGGGTGGTGTAATGAATGTTAGTTTTGGGTATATGGTGGTTGGTGATAATGCTAGTGCTACCAGAGACAGTCATAAAGCTCCTAATGTTTTGACTTCTA GGCAGAATAGTACGGCTTTAATGAAACCAGATGTTAAACCAAAACAGCTTGATGGAAGCAGCAACTTCAGGCGTGCTAAAAGTTTGTCAGTCAAGCAGTT TGATGAGGTAAAGGATCTTCGTGAGGTATTGCCAGTATCAAAGTCAGCACTAGCCAGCTCAATTGACGTCTTATACAAGAAATTTGATGAAGAAAAGGTA TTTAGTCCTTCACATAGTAAATCTGAACATGATGTGTTCACAGAAATTCTCGACCCGATCAAACCAGATGCTTGTGCTTCACCTGATCTTCAGGAACAAA GGCCCGAAGAGCATGTAGGCGATGATGGAAATACATGTCCAGCGCTTGACAAACATGAAGTCGACGTGTTTCAAGAAAAACTGGAGACAGTTAAACCAGA TGACTACCCTTTACCTGATTCTGGAAAACAAAACCCTGAAGATTGTCAAGGTGATGAGTTTTTTGTTGTTGATAAGGGCATAGAATTGTCGCTAGATGAA CCTGTTAAACCAGAGGAATCAATCATAAAGGCTCCTGAAGATGCTGCTACAGTATATAGTAACGATACCCTTGATACTGCAGGGATACAAGTATCTTCTG AAGATAGTATTAAACATGATTCCCTGGACGAGGTAAATGGTAGTAGTTCTAAGGATCTGGCTGCGGCACCTGAATTTTCTTATCAGGAGGATGACTTATA CATGGAGGAGCTGCTCCTGCAAGAGTTTGAATCAGCTTTAAATAGTGTCTCAGATTTGAAGACATTGCCATGGGAATCTCCTAAAATCATGGAAGCCAAA TCTGAATATGATATGAGAAAGTCACATTCACATAGCTTTGATGATGTTACAGAGATAGTTACCAGTGAATTTTTAAGCATGCTAGGCATAGGTCACAGTC CAACAGGCTTGAGTTCTGAAAGCGAGCCCGAGTCTCCAAGGGAGATTCTTTTAAGACAATTTGAGAAGGAGGCTCAGGATGGGGGCTTTTCTTTATTCGG TTTTGACATGGAGTATGGCAATGAAGAAGATGGTGGAGATGATGCTTCTATTGGATCAGAGAAGTGGAACTCTTCTGAGGGTATTAAGCCGTCATCCTTG CTGCAATCTATGCCGGAGGAGCATGTTGTTGAGTCTCATGATGTCGGAACCAAACAGAGGGCTCAGATGCTAGAAGACTTGGAAACAGAAGCCTTAATGC GTGAATGGGGTTTGAATGAGAAGGCTTTTCATCAATCTCCACCAAAAGACTGCTCTGGTTTTGGAAGTCCAATTCCAATACCCCCCGAAGAGCCTCCTAC GCTGCCTCCTCTGGCTGACGGGCTGGGCCCTTTTCTTCAGACAAAAGATGGGGGTTTTCTAAGGTCTATGGATCCCACAATTTTCAGTAATTCTAAAAGT GGTGGGAGCTTAGTCATGCAGGTTTCCAACCCTGTTGTGGTACCTGCAGAAATGGGTTCTGGAATAATGGACGTTTTGCAGTGTTTGGCTTCAGTGGGAA TTGAGAAGCTCTCAATGCAGGCGAAGGAGTTAATGCCTCTGGAAGATATCACAGGGAAGACAATGCAACAAATAGCATGGGAAGCTATGCCTGCCTTAGA GGGAACAGAAAGGCAGAGTCATTTGCAGAATGATTCAATTACAGGGCTAGATACTACTTGTGTGCAAAGGGAGCTGAAAGGAACAGCACCTGGACTAAAG CCTAATAAGATTAGTTCAAGTTCAGTGAGAAACCAGACAGGCTCAGACTCAGAGTTTGTTTCGTTGGAAGATCTTGCTCCATTGGCTATGAATAAAATTG AAGCACTTTCAATGGAGGGTTTGAGAATACAATCTGGGATGTCAGAGGAGGATGCGCCATCAAACATCGTCGCTCAGTCGATTGGGGATATTTCAGCTCT CAAGGGTAAGGGGGTTGATGTTAGTGGATCCCTTGGCCTGGAAGGAGCTGCTGGATTGCAGTTGTTGGATGTCAAAGACGGCAGTAATAACGGAGTTGAT GGGATGATAGGCCTATCATTAACTCTCGATGAATGGATGAGGCTGGATGCAGGCGAGATTGATGACATGGATAATATCAGTGAGCATACTTCCAAAGTTC TTGCAGCCCATCATGCTAACTCGTTTGACTCTATACGCGGGAGTTCAAGGGGGAAACGGGGGAAAGGTAGAAAGTGTGGTTTGCTGGGAAACAATTTCAC AGTAGCATTAATGGTGCAACTTCGTGATCCATTGAGAAATTATGAGCCTGTTGGAACACCAATGCTTGCTCTTATACAAGTTGAGAGAGTGTTTGTCCCA CCAAAGCCAAAAATTTACTTTAACGTATCCAAGTTAAGGA
• Tissue: flowers
• Gene name: LI_gene_67533;
• Additional information: details;

Expression of Ll_transcript_54803

FPKM

• FPAB: 4.7
• FPNAB: 1.6
• LF1: 2.6
• LF2: 2.6
• LF3: 3.2
• LF4: 2.4
• UF1: 1.5
• UF2: 2.5
• UF3: 3.1
• UF4: 2.1

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_54803

• Blastp: Protein PLASTID MOVEMENT IMPAIRED 1-RELATED 1 from Arabidopsis with 47.51% of identity
• Blastx: Protein PLASTID MOVEMENT IMPAIRED 1-RELATED 1 from Arabidopsis with 45.34% of identity
• Eggnog: NA(ENOG410Y9MA)
• Kegg: Link to kegg annotations (AT5G20610)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019417274.1)
• Pfam: N-terminal C2 in EEIG1 and EHBP1 proteins (PF10358.8)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;