Ll_transcript_54806

• Id Trinity: FTRINITY_DN57298_c0_g1_i3
• Name Transcript: Ll_transcript_54806
• Sequence: GGTAGCGGCATTTCAAACTTGTAACAGAGAGAGAAACAAAGAGAGAGAAGAAGATAAAGATATCAACCCTCTCTTCACATAAAACGCAACTCTATATGAT GTTTGCAAAAGCTGAAGCTGGTGAGAAGAGTGGTGCTGGTAATCCTAAGAAGTTGGTGAAAGATGTTGAAACTATAAACAAAGCTCTGTACTTGGACAGA AATTCTTCAAAAAATTCAACACCTAGTGCAATTTCTCGATCTAAATCCACTTGGAAACCCCAATCACCTGAACCCAAATCAAGGCTCAAAGGTAGTACTA GTAGCAGTGGTAGTAGTAGCGGCAGAAGTAACGATAATGATAATTTGCAGAAGGATAAGAAGTCCATATGGAATTGGAGGCCACTGAAGGCCCTTTCGCA TATCCGAAATAAGAGGTTCAATTGTAGTTTTTACCTCCAAGTCCATTTGATTGAAGGGTTACCTTCCAATTTTGATGATGCTAGCCTTAGCGTGTCTTGG AAGAGGCGAGACGGTGTTTTGGTGACCCGTCCGGCCAAGGTAGTTCAAGGTGTGGCTGAATTTGAAGAGAAGCTGTCTTACACTTGCTCGGTGTATGGAA GTAGGAGTGGACCTCACCATTCGGCGAAGTACGAAGCAAAGCATTTTTTGCTCTATGCTTCTCTAATCACTGCACCGGAGCTTGATTTGGGGAAGCACCG GGTTGACCTCACGAGGTTGCTTCCTCTTACGCTAGAGGAGCTTGAAGAGGAGAAGAGCTCAGGGAAGTGGACTACAAGTTTTAGATTATCAGGAGCAGCT AGGGGTGCCACAATGAATGTCAGTTTTGGGTACGTGGTTGTTGGTGATAACACTAGTGCTAGCAGAGACAACTATATTGCTCCGAATGCATTGACTTTGA GGCAGAATAGTATGGCGGCCTTGATGAAATCGGGTATTAAATTCAGACAGTCTGATGGAAGTTTGCCAAGCAATACCAATCAGTATTCATATCAAAATGT AGATGAAGTAAAGGATCTTCATGAGGTATTGCCATTATCAAGATCAAAATTGGCCAGCTCAGTAGAAGCCTTATATAAGAAACTTGATGAAGAAAAGACT TTTAGTCCTCTGCAAAATGAACCTAAAGAAATTGAGGTGTTCACAAAAGATTGTAAGCCGATCAAAGTAGATGCATGTTCTTTATCTGATTCTGGAAAAG CTAAGCCAGAGGAGCTTCTAGGTATTGAAGGGAAAACATGTAGCCCAATGCATGTCAAACCTGAATGTGAGGTATGTGAAGAAAATGTGGAGACAGTTAA GCTAGATTGTTATCCTTCACCTGATTCTGGAAAAGGAAATCGCGAGGCTGAAGAGTGGGAAAGTAATAAAGGAAAAACACACAGTCCAATTCATGACAAG CTTGAATTTGATCTGCTTCAAGAAAACGCGGAGACAGTTAAGCCGGAAGGTTATCCTTCACCTGACTCCGGAAAAGAGAAGTGTGAAGAGTATGAAGGTA ATGGATTTTCTGTTTTTGATCAGGGCACAGAATTGTCATCAAATGAACATATTAAACTAGAGGAACCAATAATAAAGGCTCTTGTCCATGCTCATACAGT TGACAGTACTTGTTGGATTGATACTTCTGGCATACGAGCATCTTTTGAAGATAGTGATAATCATGATTCCCTGGATGACGTAAATGTTAGTTCAAAGGAA AAGGCTATGGTACATGAGTTTTTTTACAAAGAGAACAACATATGCTCGAAAGAACATCTCTTGCAAGAACTGGAATCAGCTTTAAATACTGTCTCAGATT TGGAGAGTGTGACATTTGACTGTCCTGATATTATGGAAGTCAAATCTGAATGTGAAATGAGAAAATCCCATAGCTTAGATGATTTTACAGAATCGGTTGC CAGTGAATTCTTAAGTATGCTGGGAATAGACCATAGTCCAGTGGGCTTGAGTTCTGAAAGCGAGCCTGAGTCTCCAAGAGAGCGCCTTTTAAGACAATTT GAGAAGGACGCTCTGTCTGAAGGCTTCTCTTTATATGATTTTGGCACGGACAGTGATAATGAAGATGGCAACCATTCTGATGCTTCTTTTGGATCTGAGC AGTGGAAGTTCTCTGACGGGATTAAGTCACCATCCCTGTTAGAAGATCTGCAGGAAGGGCATTTTATTCAGTCTCGGGATGTGAAGAGCAAAATAAAGGC ACAGATGCTACAAGACATGGAAGCAGAAGCCTTAATGCGTGAATGGGGTTTGAATGAGAAGTCTTCTCAGCATTCTCCACCAAAAGACAGTACTGGTTAT GGAAGTCTAATTCATTTACAGATAACAGAGCCTCACATATTGCCTCCTCTGCCAGAGGAGTTAGGGCCTTTTACTCGGACAAAAGATGGGGGGTTTCTAC GGTCTATGAATCCCTCACTTTTCAGGAATGCTAAAGGTGGGGGGAACTTAATCATGCAGGTTTCGAACCCCGTTGTGGTACCTGCAGAAATGGGTTCTGG AATAATGGAGATTTTGCAGTGTTTGGCTTCAGTGGGAATTGAGAAGCTCTCAATGCAGGCGAAGGAGTTAATGCCTCTGGAAGATATCACAGGGAAGACA AT
• Tissue: flowers
• Gene name: LI_gene_67533;
• Additional information: details;

Expression of Ll_transcript_54806

FPKM

• FPAB: 9
• FPNAB: 3.4
• LF1: 5.2
• LF2: 6.6
• LF3: 6.5
• LF4: 5.3
• UF1: 3.8
• UF2: 6
• UF3: 7
• UF4: 4.4

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_54806

• Blastp: Protein PLASTID MOVEMENT IMPAIRED 1-RELATED 1 from Arabidopsis with 42.21% of identity
• Blastx: Protein PLASTID MOVEMENT IMPAIRED 1-RELATED 1 from Arabidopsis with 42.09% of identity
• Eggnog: NA(ENOG410Y9MA)
• Kegg: Link to kegg annotations (AT5G20610)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019463634.1)
• Pfam: N-terminal C2 in EEIG1 and EHBP1 proteins (PF10358.8)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;