Ll_transcript_54809

• Id Trinity: FTRINITY_DN57298_c0_g1_i4
• Name Transcript: Ll_transcript_54809
• Sequence: ATAAGGTAGCAGCATTTCAAAGTGGAAACAAAGATACACAGAGATTAGCCTTGGAGAAGAAGATAATAACCCTTTATGATGTTGTCAAAAGCTGAAGCTG GTAAGAAGAATGGTTCTGATAAACTACAGAAGTTTTTAAAAGATGTTGAAACTGTAAACAAAGCTATGTTATTGGACAGAAGTTCTTCAAAAAATCCAAT ATCTAGTGCGATTTCTCGATCTAAATCCACTCGGAAACCCCAATTGCCTGATCCAAAACCAAGGTCCAAAGGTGGTGGTGGTAGTAGTAGCAGCAGCAGC AGCAGCAGTAGGAATGTTGATGATAATTTGCGGAGCGATAAGAAGTCCATATGGAATTGGAGGCCATTGAAGGCCCTTTCACACATCCGACATAAGAGGT TCAATTGTTGTTTTTACCTCCAAGTCCATTTGATTGAAGGGTTGCCTTCCACTTTTGATGATGCTAGCCTTAGTGTGTCTTGGAAGAGGCGAGACGGTGT TTTGGTGACCCGTCCATCGAAGGTGGTTCAAGGCGTGGCTGAGTTTGAAGATAAGTTGACTTACACTTGTTCAGTGTATGGCAGTAGGGGTGGACCTCAC CATTCGGCGAAGTACGAAGCAAAGCATTTTTTGCTCTATGCTTCTCTTCTCAGAGCACCGGAGCTTGATTTGGGGAAACATCGGGTTGACCTAACGCGGC TGCTTCCTCTCACTCTGGAGGATCTTGAAGAGGGGAAGATCTCAGGGAAATGGACTACGAGTTTTAGATTATCTGGAATCGCTAAGGGTGGTGTAATGAA TGTTAGTTTTGAGTATATGGTGGTTGGCGATAACACTAACGCTACTAGAGACAGCCTCAATGCTACTAATTCTTTGAGTTTGAGGCAGAATAGTATGCCT GTGATGAGAGCAGATGTTAAACCCAGACAGCTTGATGGAAGCCGCAAGTTGAAGTCTATCCGAAGTTGGTCAACCAGTCAGTTTGATGAGGTAAAGGATC TTCGTGAGGTATCGTCGGTATCAAAGTCAGCCCTAAACAGTTTAATAGATGTCTTATACAAAAAAATTGATGAAAAAAACTCATGGAGTCCTTCAAGTGA ACCCGAGTTTGATGTGTTTACAGAAAACCTTGACCCAATCAAACCAGATGATGATTCTTCATCGGATATTTGGAAAGAAAACCCTGAAGAGCATGCGTGC GATGATGGAAATACATGTCCAGTGCACGACAAACATGAACTGGATTTGTTCCAAGAAAAACTGGAGATGGTTAAACCAGATGAACAACCTTTACCTGATT CTGGAAAAGAAAACTGTGAAGGTTGTCAAGGTAATGAATTTTTTGTTGTTGATAAGGGTATAAAATTGTCACTAGATGATGAACCTGTTAAAGTGGAGGA ATCCATCATAAAGGCTCCTGAAGATACTGCGACAATAAACAGTACATATGTGCTTGATACTGCAGGTATACGAGTATCTTCTGAAGATAGTGTTAAACAT GATCCCCTGGATGAGGTAAACGGTAGTAGTTCTCGGGATCAGGCTATGGTGAATGAATTTTCTTGCAAAGAGGATGACTTATACATGGAAGAATTGCTGC TGCAAGAGTTTGAATCAGCTATAAATAATTTCTCAGATTTGACGACAGTGGCACAAGAATCTCCTAAAATCGTGGATGCCAAATCTAAATACGAGACAAG AAAATCACATAGCTTTGATGATGTTACAGAGTCAGTTGCCAGTGAATTTTTAAGCATGCTAGACGTAGACCACAGTCCCACAGAGTTGAATTCTGAAAAC GAGTCTGAATCTCCAAGAGAGCTCCTCTTGAGACAATTTGAGAAGGAGGCTAAGGATGGGGGGTTTTCTTTATTTAATTTTGACGTTGACGATGATAACG AAGCAGAAGGTGGCGGTGAAGCTTATATCGGATCCGAGCAGTGGAAATTCTCTGAGGGTATTAAGTCGCCATCCTTGGTGCATGCTATGCAGGAGGAACA TCCGGTTGAATCTCATCAGACCAAGAGCAAAAAGAGGGCTCAGATGCTAGAAGACTTGGAAACGGAAGCCTTAATGCGTGAATGGGGTTTAAATGAGAAA GCTTTTCAGAATTCTCCACCAAACGGTGGTTTTGGAAGTCCAATTCCGTTACCCCCGGAAGAGACTCCTACATTGCCTCCTCTGGCTGACGGGCTAGGCC CTTTTCTTCAGACAAAAGATGGCGGTTTTCTACGGTCTATGGATCCCTCAATTTTCAGTAATTCTAAAAGTGGCGGGAGCTTAATCATGCAGATTTCCAG CCCTGTTGTGGTACCTGCAGAAATGGGTTCGGGAATAATGGACGTTTTGCAGTGTTTGGCTTCAGTGGGAATCGAAAAGCTCTCAACGCAGGCAAAGGAG TTAATGCCTCTTGAAGATATCACAGGGAAGACAATGCAACAAATAGCATGGGAAGCTATGCCTGCCTTAGAGGGAACAGAAAGGCAGAGTCATTTGCAGA ATGATTCAATTACAGGGCTAGATACTACTTGTGTGCAAAGGGAGCTGAAAGGAACAGCACCTGGACTAAAGCCTAATAAGATTAGTTCAAGTTCAGTGAG AAACCAGACAGGCTCAGACTCAGAGTTTGTTTCGTTGGAAGATCTTGCTCCATTGGCTATGAATAAAATTGAAGCACTTTCAATGGAGGGTTTGAGAATA CAATCTGGGATGTCAGAGGAGGATGCGCCATCAAACATCGTCGCTCAGTCGATTGGGGATATTTCAGCTCTCAAGGGTAAGGGGGTTGATGTTAGTGGAT CCCTTGGCCTGGAAGGAGCTGCTGGATTGCAGTTGTTGGATGTCAAAGACGGCAGTAATAACGGAGTTGATGGGATGATAGGCCTATCATTAACTCTCGA TGAATGGATGAGGCTGGATGCAGGCGAGATTGATGACATGGATAATATCAGTGAGCATACTTCCAAAGTTCTTGCAGCCCATCATGCTAACTCGTTTGAC TCTATACGCGGGAGTTCAAGGGGGAAACGGGGGAAAGGTAGAAAGTGTGGTTTGCTGGGAAACAATTTCACAGTAGCATTAATGGTGCAACTTCGTGATC CATTGAGAAATTATGAGCCTGTTGGAACACCAATGCTTGCTCTTATACAAGTTGAGAGAGTGTTTGTCCCACCAAAGCCAAAAATTTACTTTAACGTATC CAAGTTAAGGA
• Tissue: flowers
• Gene name: LI_gene_67533;
• Additional information: details;

Expression of Ll_transcript_54809

FPKM

• FPAB: 0.2
• FPNAB: 0.3
• LF1: 0.5
• LF2: 0.5
• LF3: 0.6
• LF4: 0.6
• UF1: 0.3
• UF2: 0.6
• UF3: 0.6
• UF4: 0.2

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_54809

• Blastp: Protein PLASTID MOVEMENT IMPAIRED 1-RELATED 1 from Arabidopsis with 47.52% of identity
• Blastx: Protein PLASTID MOVEMENT IMPAIRED 1-RELATED 1 from Arabidopsis with 44.81% of identity
• Eggnog: NA(ENOG410Y9MA)
• Kegg: Link to kegg annotations (AT5G20610)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019415737.1)
• Pfam: N-terminal C2 in EEIG1 and EHBP1 proteins (PF10358.8)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;