| Id Trinity | FTRINITY_DN57298_c0_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_54813 |
| Sequence | TTATTTTCAGTGAAAAAAGTTGAATTCTTTTCTGGGTTTGAAAGTTTCAGTTTTGATTTTCAGAAGCTGGGTCTTCAATCTATTGATCCTTTATAGATTA TATTTTATTGGGTTTGTTTGTTTTTGGGTTTTATGTTTTTTCGTATATGAAAAATTGTTTTTTTATTAATATAATTATTATTACAATGAAATTCTGTGTT GGGTTTTGTTTCATTTGAATTGATGTAATTTTTGTTCCTGGGTTATAGATGATGTTTGCAAAAGCTGAAGCTGGTGAGAAGAGTGGTGCTGGTAATCCTA AGAAGTTGGTGAAAGATGTTGAAACTATAAACAAAGCTCTGTACTTGGACAGAAATTCTTCAAAAAATTCAACACCTAGTGCAATTTCTCGATCTAAATC CACTTGGAAACCCCAATCACCTGAACCCAAATCAAGGCTCAAAGGTAGTACTAGTAGCAGTGGTAGTAGTAGCGGCAGAAGTAACGATAATGATAATTTG CAGAAGGATAAGAAGTCCATATGGAATTGGAGGCCACTGAAGGCCCTTTCGCATATCCGAAATAAGAGGTTCAATTGTAGTTTTTACCTCCAAGTCCATT TGATTGAAGGGTTACCTTCCAATTTTGATGATGCTAGCCTTAGCGTGTCTTGGAAGAGGCGAGACGGTGTTTTGGTGACCCGTCCGGCCAAGGTAGTTCA AGGTGTGGCTGAATTTGAAGAGAAGCTGTCTTACACTTGCTCGGTGTATGGAAGTAGGAGTGGACCTCACCATTCGGCGAAGTACGAAGCAAAGCATTTT TTGCTCTATGCTTCTCTAATCACTGCACCGGAGCTTGATTTGGGGAAGCACCGGGTTGACCTCACGAGGTTGCTTCCTCTTACGCTAGAGGAGCTTGAAG AGGAGAAGAGCTCAGGGAAATGGACTACGAGTTTTAGATTGTCAGGAATGGCTAAGGGTGGTGTAATGAATGTTAGTTTTGGGTATATGGTGGTTGGTGA TAATGCTAGTGCTACCAGAGACAGTCATAAAGCTCCTAATGTTTTGACTTCTAGGCAGAATAGTACGGCTTTAATGAAACCAGATGTTAAACCAAAACAG CTTGATGGAAGCAGCAACTTCAGGCGTGCTAAAAGTTTGTCAGTCAAGCAGTTTGATGAGGTAAAGGATCTTCGTGAGGTATTGCCAGTATCAAAGTCAG CACTAGCCAGCTCAATTGACGTCTTATACAAGAAATTTGATGAAGAAAAGGTATTTAGTCCTTCACATAGTAAATCTGAACATGATGTGTTCACAGAAAT TCTCGACCCGATCAAACCAGATGCTTGTGCTTCACCTGATCTTCAGGAACAAAGGCCCGAAGAGCATGTAGGCGATGATGGAAATACATGTCCAGCGCTT GACAAACATGAAGTCGACGTGTTTCAAGAAAAACTGGAGACAGTTAAACCAGATGACTACCCTTTACCTGATTCTGGAAAACAAAACCCTGAAGATTGTC AAGGTGATGAGTTTTTTGTTGTTGATAAGGGCATAGAATTGTCGCTAGATGAACCTGTTAAACCAGAGGAATCAATCATAAAGGCTCCTGAAGATGCTGC TACAGTATATAGTAACGATACCCTTGATACTGCAGGGATACAAGTATCTTCTGAAGATAGTATTAAACATGATTCCCTGGACGAGGTAAATGGTAGTAGT TCTAAGGATCTGGCTGCGGCACCTGAATTTTCTTATCAGGAGGATGACTTATACATGGAGGAGCTGCTCCTGCAAGAGTTTGAATCAGCTTTAAATAGTG TCTCAGATTTGAAGACATTGCCATGGGAATCTCCTAAAATCATGGAAGCCAAATCTGAATATGATATGAGAAAGTCACATTCACATAGCTTTGATGATGT TACAGAGATAGTTACCAGTGAATTTTTAAGCATGCTAGGCATAGGTCACAGTCCAACAGGCTTGAGTTCTGAAAGCGAGCCCGAGTCTCCAAGGGAGATT CTTTTAAGACAATTTGAGAAGGAGGCTCAGGATGGGGGCTTTTCTTTATTCGGTTTTGACATGGAGTATGGCAATGAAGAAGATGGTGGAGATGATGCTT CTATTGGATCAGAGAAGTGGAACTCTTCTGAGGGTATTAAGCCGTCATCCTTGCTGCAATCTATGCCGGAGGAGCATGTTGTTGAGTCTCATGATGTCGG AACCAAACAGAGGGCTCAGATGCTAGAAGACTTGGAAACAGAAGCCTTAATGCGTGAATGGGGTTTGAATGAGAAGGCTTTTCATCAATCTCCACCAAAA GACTGCTCTGGTTTTGGAAGTCCAATTCCAATACCCCCCGAAGAGCCTCCTACGCTGCCTCCTCTGGCTGACGGGCTGGGCCCTTTTCTTCAGACAAAAG ATGGGGGTTTTCTAAGGTCTATGGATCCCACAATTTTCAGTAATTCTAAAAGTGGTGGGAGCTTAGTCATGCAGGTTTCCAACCCTGTTGTGGTACCTGC AGAAATGGGTTCTGGAATAATGGACGTTTTGCAGTGTTTGGCTTCAGTGGGAATTGAGAAGCTCTCAATGCAGGCGAAGGAGTTAATGCCTCTGGAAGAT ATCACAGGGAAGACAATGCAACAAATAGCATGGGAAGCTATGCCTGCCTTAGAGGGAACAGAAAGGCAGAGTCATTTGCAGAATGATTCAATTACAGGGC TAGATACTACTTGTGTGCAAAGGGAGCTGAAAGGAACAGCACCTGGACTAAAGCCTAATAAGATTAGTTCAAGTTCAGTGAGAAACCAGACAGGCTCAGA CTCAGAGTTTGTTTCGTTGGAAGATCTTGCTCCATTGGCTATGAATAAAATTGAAGCACTTTCAATGGAGGGTTTGAGAATACAATCTGGGATGTCAGAG GAGGATGCGCCATCAAACATCGTCGCTCAGTCGATTGGGGATATTTCAGCTCTCAAGGGTAAGGGGGTTGATGTTAGTGGATCCCTTGGCCTGGAAGGAG CTGCTGGATTGCAGTTGTTGGATGTCAAAGACGGCAGTAATAACGGAGTTGATGGGATGATAGGCCTATCATTAACTCTCGATGAATGGATGAGGCTGGA TGCAGGCGAGATTGATGACATGGATAATATCAGTGAGCATACTTCCAAAGTTCTTGCAGCCCATCATGCTAACTCGTTTGACTCTATACGCGGGAGTTCA AGGGGGAAACGGGGGAAAGGTAGAAAGTGTGGTTTGCTGGGAAACAATTTCACAGTAGCATTAATGGTGCAACTTCGTGATCCATTGAGAAATTATGAGC CTGTTGGAACACCAATGCTTGCTCTTATACAAGTTGAGAGAGTGTTTGTCCCACCAAAGCCAAAAATTTACTTTAACGTATCCAAGTTAAGGA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_67533; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_54813
| Blastp | Protein PLASTID MOVEMENT IMPAIRED 1-RELATED 1 from Arabidopsis with 47.51% of identity |
|---|---|
| Blastx | Protein PLASTID MOVEMENT IMPAIRED 1-RELATED 1 from Arabidopsis with 45.34% of identity |
| Eggnog | NA(ENOG410Y9MA) |
| Kegg | Link to kegg annotations (AT5G20610) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019417274.1) |
| Pfam | N-terminal C2 in EEIG1 and EHBP1 proteins (PF10358.8) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |