| Id Trinity | FTRINITY_DN57316_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_166394 |
| Sequence | TACAATTTGACATGTGTAGCTAAGGTGAGAATATTCCAATCACATTTTTCTTAAAAACCAATCCCAACTCACTTCTATAATCTCAAACTTACACACCCTC TCTCTCTCTTTGTGGTGTGTTGTTTATTTCACTTCTATAGCTATTCCAAACTGCACCAAGTACATTGGAAATTGTACTACTCTTGAGTCTTGAGATGTCA AGTCTTCTTCTGAGGGTGAGTTTTGGACCAATAGAAGACACCAACTCCTTGTTGGGTTTTGCATGCAGAAGTCATATTATTGAAAGAACCCAAAGAAGGT TGAAAGGAGTCACTTTTGCAAATAAGGCTGTTGCTTTATCAAGTGCTGTAGTAGCAAACCCAGTAATATCTTCAGAGGAGAAGGTCTATGAAGTGGTGCT TAAGCAAGCAGCTTTGGTTAAAGAAAGGAATAGGGATGCAAAGATAGCCTTGGATTTGGATAGTAAGCCACTGGAAAATGCTGAATTCAGCAATGGGAAT TTGTTGAATTTGGCTTATGATCGATGTGGTGAAGTTTGTGCTGAGTATGCTAAGACATTTTATCTTGGTACTTCTTTCTCTATCTCTTCTTCTTTTCCAA CTTCTCTCATTCATTGTCCCTCTCTCAAATGAGTTTAGTGGAATTTGGCTTAAATTTCTCTCAACTTATCAAATATCCTAATATCAACTTAACCTACAGA AATCTTCCTATTATATACTACCATGTACCATTTCATTTATCAGAAATATTCATCTTATCAAAAATATTATATGTTTATCTGACAAGAGAAGTGATAACTA ATAGTAATATAGATTTCTATTGATTATTAATGCCTCATATGTTGACTTATTTTGAGGTGAATAAATTAGTGTAATGGTGTTGTGCACTTGACTTAGAGAA ATGATTCTTTACCATTGATTTGGAATTGAGAATCTGGTTAGACCAGTATCCTTGAACCATGTAATAATTTCGATGCGACTTCTCTTCTAACTGGAAATTG TAGGCACACGATTGATGACCGAAGAGCGCCGAAGAGCCATCTGGGCAATCTATGTGTGGTGCAGAAGAACTGATGAGCTAGTTGATGGTCCAAATGCTTC ATACATCACTCCTTCGGCATTGGACAGGTGGGAGCAACGACTAAACGATGTCTTTCAAGGTCGTCCTTTCGATATGTACGATGCTGCCCTCTCGGACACT GTCACTAGGTACCCTGTAGATATACAGCCTTTCAAGGACATGATAGAAGGGATGAGGATGGACCTGAGAAAGTCGAGATACAATAATTTCGATGAGCTCT ACCTTTACTGCTACTATGTTGCTGGGACAGTGGCTCTTATGAGTGTTCCTGTAATGGGCATAGCTCCTGAATCTAAGGTTTCAACTGAGAGCATTTATAA TGCTGCATTGGCACTAGGCATTGCAAATCAACTTAACAACATACTCAGAGATGTTGGAGAAGATGCTAGGAGAGGCAGAGTATATCTCCCACAGGATGAA TTGGCAAAGGCTGGCTTATCCGATGAGGACATTTTCTCTGGGCAGGTAACCGACAAATGGCGGAGTTTCATGAAGGGCCAAATAAAGAGGGCAAGGAAGT TTTTCGATGAAGCAGAGGAGGGAGTTACACAGCTTGATGCAGCTAGCAGATGGCCTGTGTGGTCATCATTGTTGTTGTATAGACAGATCTTAGATGCTAT TGAAGCCAATGATTATAATAACTTCACAAAAAGGGCTTATGTTGGAAAAACAAAGAAGCTATTATCACTACCTGCTGCTTATGGTATAGCTCTCATAGGC CCTCAGAAGTTAAGCAAGATGGTTTTGGGATGAATGATGAATATTATAATGTGCCCATTGCCCACGATCAATTTGAAAAATTCTGTTGCATAGAGTATAG GTTGCTACAACTACATACCTCTCTTGGATTAGAATTGTTTACTTATTTAATTACTGGACAACATGCAAGTATGCAACAGTAGTAATAAATCACATATTCT TTAAACTTAGAAGAAAACTTTAATTTCTTTTTATTCCATAGGCAAGTAAATCTAGATTTCTAGCTGAGGAAAATGGACCTGTGGCTTCACCTTTGTGGTA GCACACTTGGTTCATTTGCTCAATGTGCTTGAGCAAGAAAGGTCTAATCTGATAACATTTTTTAAAACATTCATTCACAAATGTTCATATTATGAGTGTT CATATATTAGAACTCATTTGAGAAACATCCCCTGAATGAAGTGCCATCTGAATAGGTTAATGTAACTTGCATGTGATACTTGGTGTAAATGATCTTCTTT TCTGTAGAGAATGCACACTGGTGAGTGGTGACTCCTTTCATATGAAACAAATCTTGTGTTTATTTCATGAATACTTTAGCCAGAAAATTTGCACAATCAA TCTTAGCATGGGATAATAGGAATCAAACCATGGAAACTTGTGTCTTGAGGGAATGGTTCATTTGACACATATATTAATATTACATGAGTGATACTCCTAC TTTGAAGGAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_67671; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_166394
| Blastp | Phytoene synthase 1, chloroplastic from Lycopersicon with 82.16% of identity |
|---|---|
| Blastx | Phytoene synthase 1, chloroplastic from Lycopersicon with 81.75% of identity |
| Eggnog | phytoene synthase(COG1562) |
| Kegg | Link to kegg annotations (543988) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019435350.1) |
| Pfam | Squalene/phytoene synthase (PF00494.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |