Ll_transcript_166405

• Id Trinity: FTRINITY_DN57316_c1_g1_i4
• Name Transcript: Ll_transcript_166405
• Sequence: AGTATACTATTAGTGACTTGAGGAGAAAAAGTAAATATTTTATTCAGTTGAATTTTATAAGTTTAATGATATTGATTTATTTACATGCCAAATTATGTCC ATTGAGAAACTCATTTTTTTGTATAATCAACCTCATATTATTTGGCATCGACAATGTTGATGTTGATGTTGATGCATTCAGTCACATGTTCAATTAATGG GAAGAGTTTCTTATAACTGCGTTCAAGGTTCAGTAACACCCAAATAGATAGCTTTAGTGGAATTCCCACTTGCTGGAACTGTGGTTTTGAAGACATTAAT TGAACAAAAGGCTGTTGTTTTGCCTGTGTTTTCAACTAGGATTTTAACTCAAGGCAGTTTAATAGTTCTGTGAAGGATTAGTGTTTGAGAATTTGGAAGT CAAGAAGGAAAAGAATCAGCTTTGCAAGCAGAAAGCTAGAAGGAAAGGATTAGTTTGATCATCAATTCATCATGTCTGTAACATTATTAAGGACTGTCTT AGAGGTCTCCAGTTCTGCCAGGTTGTTCGACTCCATCCGAAATGCAAAGCTTTTAGGTTCTTCGAAGTTTATGTCACGAGATATGGGGTCAATTAGAGCA AAGCAGGATAAGAAAAAGAGACGGCGATTTTGCTCTTTGAGTGTGAATACAAATTATGCATGTGTTGGTCAGCCTGGCTTAGAAGGTGCAGGCAACTTCC CTCTTCTGTCAAATGTGCTCATAAACCCAGCTGCAGGAGAAGTCGTTGTTTCATCAGAGCAGAAGGTCTACGATGTGGTGTTGAAGCAGGCATCTTTGGT TAAGAGGAAGCTGGGCTCTACTGATGAACTGGAAGTGAAACCAGATATTGCTCTTCCTGGGAATTTGAGCTTGTTGAGTGAAGCTTATGACCGGTGTGGA CAAGTTTGTGCGGAATATGCTAAAACATTTTACCTTGGAACTCTCTTAATGACTCCTGAAAGGCGAAGGGCTATCTGGGCAATATATGTGTGGTGTCGGA GAACAGATGAACTTGTTGATGGCCCTAATGCTTCACACATTACACCAACTGCTCTGGATAGATGGGAATCAAGATTGGATGATCTTTTCCAGGGTCGTCC ATTTGATATGCTTGATGCTGCTGTATCAGATACAGTCTGCAAGTTTCCTGTTGATATCCAGCCATTTAAAGATATGATAGATGGAATGAGAATGGATCTT AAGAAGTCGAGATACAAAAACTTTGATGAACTATATCTCTACTGTTACTATGTTGCTGGGACAGTTGCTTTGATGAGTGTTCCAATAATGGGCATTTCAC CGTATTCAGAAGCCACCACAGAGAGTGTGTACAATGCTGCCTTGGCCCTGGGAATTGCAAATCAGCTAACCAACATACTCAGAGATGTTGGAGAGGACGC TAACAGAGGAAGGGTGTATCTACCACAAGATGAGTTGGCTCTGGCCGGGCTTTCGGATGACGACATTTTTGCTGGTAAGGTGACAGACAAGTGGAGGAAC TTCATGAAGAGCCAAATTAAAAGGGCAAGAATGTTTTTCAATGAAGCCGAAAAGGGAGTTGTGGAGCTTAACGAGGCTAGCAGATGGCCGGTATGGGCGT CGCTGCTATTGTATCGGCAGATATTGGATGAGATGGAAGCTAATGACTACAACAATTTCACTAAGAGGGCTTATGTGGGCAAAGCCAAGAAGCTTCTTTC TTTACCAATTGCCTATGCCAGATCTATGGTTCCTCCACCAAGAACAGTATCTTCTGCAATGAAGGCATAGATCCTACACCATATAAAAAAGCAAAATTTG TATATTATCAAATACTAAGGCATTCATTATGTGGTCATTGTTGTTGATATTAGTTTTTGACATTTTTGGTTTTTCTTTAATCTATTACATACAGTTTGAG AGATTATTCAGTTTTCTTTCTTTCTTTTTAGAGTATAGTAAGGAGTTGTTAGTTGTATTCAATAAGTGATTTTAAATTGTGACACAAGTTATGGACATGT AATCCGTTCAATGTAACAACGAAGTAAAGTGATTTTAAATTGTGACAAGTTATTTTTTGCAAATGAAAATAAGTTGGACAGTTCTATCAATTGATTAAGC TTTGTACTATTAAATTAT
• Tissue: flowers
• Gene name: LI_gene_67673;
• Additional information: details;

Expression of Ll_transcript_166405

FPKM

• FPAB: 3.7
• FPNAB: 7
• LF1: 11.1
• LF2: 11.2
• LF3: 4.4
• LF4: 4.6
• UF1: 14.2
• UF2: 8.6
• UF3: 5.4
• UF4: 5.4

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_166405

• Blastp: Phytoene synthase, chloroplastic from Cucumis with 72.26% of identity
• Blastx: Phytoene synthase, chloroplastic from Cucumis with 72.26% of identity
• Eggnog: -
• Kegg: -
• CantataDB: Link to cantataDB annotations (CNT0001867)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019460948.1)
• Pfam: Squalene/phytoene synthase (PF00494.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;