| Id Trinity | FTRINITY_DN57316_c1_g1_i9 |
|---|---|
| Name Transcript | Ll_transcript_166418 |
| Sequence | AGTATACTATTAGTGACTTGAGGAGAAAAAGTAAATATTTTATTCAGTTGAATTTTATAAGTTTAATGATATTGATTTATTTACATGCCAAATTATGTCC ATTGAGAAACTCATTTTTTTGTATAATCAACCTCATATTATTTGGCATCGACAATGTTGATGTTGATGTTGATGCATTCAGTCACATGTTCAATTAATGG GAAGAGTTTCTTATAACTGCGTTCAAGGTTCAGTAACACCCAAATAGGTCTGCATCTCGTTTCTTCCTTACATGCTAGTGATTGGATTTTCGTGTAGCAT AGGTACATGTACATAGATACGTGTAAATTTGTGACTAACTTCATAATTTAATAGTATTTGCTAATTGGCTGCTGAAATGAATGCAGAGAAAATCATAGCA TACGCAATCAGTTGATTCATAGTTTCATACTTTCTATGTGACTGCTGCAACTATTTCATTTATTTTTCTGTTTGGATTTAGATATATCACTGTGGGTTTT TGTTATAGCTAGTAAAAATGATTTTTTTACGTTGATGTTACTATAATACACTAATGCTGAATAAGTAGTGTTTGTTCTGGTTCAATCACAGATAGCTTTA GTGGAATTCCCACTTGCTGGAACTGTGGTTTTGAAGACATTAATTGAACAAAAGGCTGTTGTTTTGCCTGTGTTTTCAACTAGGATTTTAACTCAAGGCA GTTTAATAGTTCTGTGAAGGATTAGTGTTTGAGAATTTGGAAGTCAAGAAGGAAAAGAATCAGCTTTGCAAGCAGAAAGCTAGAAGGAAAGGATTAGTTT GATCATCAATTCATCATGTCTGTAACATTATTAAGGACTGTCTTAGAGGTCTCCAGTTCTGCCAGGTTGTTCGACTCCATCCGAAATGCAAAGCTTTTAG GTTCTTCGAAGTTTATGTCACGAGATATGGGGTCAATTAGAGCAAAGCAGGATAAGAAAAAGAGACGGCGATTTTGCTCTTTGAGTGTGAATACAAATTA TGCATGTGTTGGTCAGCCTGGCTTAGAAGGTGCAGGCAACTTCCCTCTTCTGTCAAATGTGCTCATAAACCCAGCTGCAGGAGAAGTCGTTGTTTCATCA GAGCAGAAGGTCTACGATGTGGTGTTGAAGCAGGCATCTTTGGTTAAGAGGAAGCTGGGCTCTACTGATGAACTGGAAGTGAAACCAGATATTGCTCTTC CTGGGAATTTGAGCTTGTTGAGTGAAGCTTATGACCGGTGTGGACAAGTTTGTGCGGAATATGCTAAAACATTTTACCTTGGTTAGCTTTCTCTTATCTT TCCTTCTAGCGAGGATGTTAACTTTTAGAGTCCACTATTGTTTTGTGTGTGGTTTTAGTCCAATTTATATGGGTTTTATCTTTCAGGAACTCTCTTAATG ACTCCTGAAAGGCGAAGGGCTATCTGGGCAATATATGTGTGGTGTCGGAGAACAGATGAACTTGTTGATGGCCCTAATGCTTCACATATTACACCAACTG CTTTGGATAGGTGGGAATCAAGATTGGATGAACTTTTCCAGGGTCGTCCATTTGATATGCTTGATGCGGCTTTATCAGATACAGTCCGCAAGTTTCCTGT TGATATCCAGCCATTTAAAGATATGATAGAAGGAATGAGAATGGATCTTAAGAAGTCGAGATATAAAAACTTTGACGAACTATATCTCTATTGTTACTAT GTTGCTGGGACAGTTGGTTTGATGAGTGTTCCAATCATGGGCATTTCACAGTATTCACAAGCAACCACAGAGAGTGTGTACAATGCTGCCTTGTTCCTAG GAATTGCAAATCAGCTAACCAACATACTCAGAGATGTTGGAGAGGATGCTAACAGAGGAAGAGTGTATCTACCACAAGATGAGTTGTCTCTAGCAGGGCT TTCAGACGACGACATATTTGCTGGTAAGGTGACAGACAAATGGAGGTACTTCATGAAGGGCCAAATTAAAAGGGCAAGAATGTTTTTTGATGAGGCAGAA AAAGGAGTGACAGAGCTTAACGAAGCTAGCAGATGGCCGGTAAGAGATGCAATCTTTTGTCATTATTATACGACACCTTTTCCGCGCTTCAATTTTTAAC ATGGACACTTTATCATGATGATTTGGTTCAAAATTCAAATCCTTGTTCCACCTTGACACATATATTGTTAATCTAAGAGATAAGGAAATCTTCATAGTCT TAAAAATGCTCTTATGTGTCTACTTAGTATAAGGTGTGGAAAACTTTGCTGAATGGATTCAACTGAGTTTTTCTGATGCCATTATAACTATTAACTACCT TTTGATTTTTCATTATAATGACATTTTTTAAAATGTTCATTACCTCAGTGCTTATAAGCCATTGGTTTTTAGCATTTCCCTGAGATAATTACATGTAAAG GTCATGATGTTACTGGAATCAGAAAATTCATTTGCTAAGACTTACATGTAAAGATCGTGATATTAACATTCGCGCAAGAACTCGAAAAGGGTATTATCGA TGTTGCAACGTGCAGGTATGGGCGTCGTTGCTGCTATATCGGCAGATATTGGACGAGATCGAAGCTAATGATTACAACAATTTCACTAAGAGGGCTTATG TAGGCAAAGCCAAGAAGTTACTTTCTTTACCAATTGCCTATGCAAGATCTCTGGTTCCTCCATCAAGAAAAGTATCTGCTGCAATAAAGGCATAGATCTC ATACCATATAAACTTCTGTAGAACAATGTGCAATGGAAAAAGAGAGTAGAAATGCATAATCTGTATATTATAAAGTATTAAGGCATTCATTATCCACTTA TTGTAGTTGATATTACTTTTTGCCATTTGCTTTGTTCTTTAATCTACACGGTTTTTTGTTTCAAGAAATGTTTTCTATTTCCTATTTTCGTTTTCAAAAA ATAATTTCCATTTTGATGTTTTCATT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_67673; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_166418
| Blastp | Phytoene synthase, chloroplastic from Cucumis with 87.96% of identity |
|---|---|
| Blastx | Phytoene synthase, chloroplastic from Cucumis with 65.83% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | Link to cantataDB annotations (CNT0001867) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019460948.1) |
| Pfam | Squalene/phytoene synthase (PF00494.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |