| Id Trinity | FTRINITY_DN57328_c1_g1_i11 |
|---|---|
| Name Transcript | Ll_transcript_168537 |
| Sequence | TACATTTACTATTGGTTAATGCAACGTCGCATGTATCCGCACTATTTTATATTTACACAAAATTATAGAATTGAGCATATATGTATATATGAAGTGCTAT ATTATATATATTAGTTTCACCTTGACTATTTCATTTTATTACACTTGACATAAAATTTTTGATATCTACATATGTCAGTGTCCAACAGTGTATGGAGAAG TATTTATAAAGTATGAGAGAAAAAAGGTGGTGCATATATGTCCTGTACGATAGTATAATTGTAGCATTCTACAAAAAAGTACAGTTGTTGTATATCCTCT TCTTTCTTAATGAAGTTCTTTTTCTATACAATAATAATAATAGCAGTACAGCTATATAAAAATTTAAAACTAATAATAATCATAATAATACTAATGAAGA CTAATAACTAGACCGAACATCTCAACAATCTGCCTGAAGTTGGAGCATGTAAATCATATGCACATAGCCTTATAATCATAACTAGTTTGAGTACTTATGA GAAACTCGTTAAGGCATATATTACTTGGTTGCTTGATCTAACGAAAGTAATAGAGAAATTTCCTGATAAGATGTTATGGGGGGTAAAATGGAAATTCACC TCTATATGATTAGTCCTCTCATTAAAAATTGAGTTGGATGCATTATGTAAGGCAGCTTGGTTGTCAAATTTGAGTTGCATCTATTGTACTTCCTCGAACT TCAATTCTTGAAGCAAATATTATAGCCATGTACATATATTGGTTGAACATGGCTTAGTAATCTGCTTTTGTGCTTGACCTGTCAAAAAAAGTCTATATAT GCCTAGAGATTGAAGATATCTTTTTTGTTTCCCTGATTTCTTGTTGTTCTTTTTTGTATCTGTTGTTCAAGGAGGTCAAATGTTTTTTTCTTGCTATTTT TTCATATTTTCCCTCGTTCATTGCTTCTAATGAAGTTTCTTATGTCAGAAAAGAGTGTTGTCACATGATTGTTGACAACTTTTTCACTTATTTGGAGTTG GGCTAGTTAATATATACCTATCTTTGAAATGGTCATTGTAGTCAACTGCTTAACTATGTTACGATGATTTTATTACTAAGTTGTGAATCTACTTTTGTTC TAGTAGTACCCAGTGCCCTTTAAGTTTAAGTTCGGCGTGAGAGATTATGTGTTTAAACTTTAAAAAATGCATGGACAGTTTACTTTTATGCTAGGATAAC AACTGTGTTCCAGTTGTTTCATGTATTGACCTAAATATGGCATCTGTATCTGGTTTATTTTTACCATTCTTATATTTTATAATTTGTCTCTATTGGCACA CAAAAATTGCCACAAAGGTGAAATATATTTTGCCACAAAGAAAGGTGAAATATAATCATCTAGCAAGTTTAATTCATAAATATGAAGTGGTTTTACTAAC TAATGACTATGACAAACATGGTCGGTTTATGCCTGATTTAGGTTCCAGATGTTACAACTGAAACTCTTCCTGAGAGACCAGGAGAACCAGATTGTCCATA CTTTGTTAAAACTCAGAGATGCAAGTTTGGTCCAAGGTGCAAGTTTAATCATCCAAAGGTTTCCTCTGAAAGTGCTGGTGTTTCTGACTTACCTGATAGG CCGTCAGAGCCCCCGTGTGCGTTCTATGTGAAAACTGGAAGATGTAAATTTGGTGCTGCATGTAAATTCGATCACCCGAAAGATATCCAGATTCAGCTGT CAGGTGAACTGAATCATGCTGCCGAACAGACACAAACAAGTTTTATGATGGAGGGGGCAACAGTAGATACGCAAACAACTCTTACATCTCCACTATTTCA AAATAGTAAAGGACTTCCTGTTAGACTGGGAGAAGTGGATTGTCCATTCTACATGAAAACTGGCAGTTGCAAATATGGTGCCTCTTGCCGCTACAATCAT CCTGACAGGACAGCAATTAATCCGCCTATTGCTGCATTAGGCCCTTCTGTCTTGGCATCCTCGGCTGCAAATCTGAATATTGGACTTATAAATCCTGCTG CACCCGTTTATCAAGCCTTTGACCCGAGGTTGTCAAACCCAATGGTAATGTTGATTGCCTACACCTCTTGGATGGAGTCTTCCTTTTATTTAAATAAATA TGTTATTATCGGAACCTGGTACATGAGACTGACACATAATAGATTGAATCTATTGGTATTAACACCTGGAATATGGAATGCGGCAGTTCCCACTTAGTGC GGTATGAGGAAGGTAAATGTAGATAATAATATTCCAGGGCTCCCACCTGGAAAATGGAATGATAATACTATTTTTGTAACTTACATCTTTCGATCTGAGC GAATATTAAGTAATCGATTGTGGTTATATGTTGGTTTACTGTGAACTTTGGTTATTCTCAGTGTTCACCTTTTTATATTGCTTGACCCTTATAGATATTG GGGTTTTGTGCTTGAATATATGTTTTCTGTACATGTCCAAACTCTTTCATTTCTCTTTTCTGTCGCTGTAGCCTCAGCTCACTCTTTTCTGTTTGTTCTC AGAGCCTTTTAGCTTCACTTTCTTCATAATTGCAGTTTCCTCAAATTCAAATTCTTCGTTTTTGGAGTCCCATTTGCCTGTTTGTTATGCTCATCCACTA CATTTTATGTGTGTGTAACAAAGATAAGTAAATGTTTGAGTCTTTCAGAACTGAATGCATCCTTGTTGTTTACTCTCAAGAATCCAGGAGGACTACTTTT GAACTCGTCTAGTAGAACTAATAATTTAATTCAATATTTGTAGAAAGAAGAGTATATCAGCTTAGGAAACTAGCCATTCTTAAATTATTATGAGTTGTGT TTCCATGAGGTACCATCATAGATGAACATACTTAAAGGCTAATGCATCTCATGCATGTAACTTGTTTTCCAGTCTCAGCTGGGAATGGCAGAAACTATCT ATCCTCAGCGACCAGGACAGATTGAATGTGATTACTATATGAAAATTGGCATGTGTAAATTCGGGGAAAGATGCAAGTTCCATCACCCAATTGACCGCTC AGCACCATCACAGCAAACCGTTAAACTCACTCCTGCAGGATTACCTAGGAGAGAGGGTGCTGTGATTTGTCCTTATTATTTGAAAACTGGCACATGCAAG TATGGTGCAACCTGCAAGTTTGACCACCCACCACCTGGAGAAGTTATGGAGATGGCAAAATCACAAACCAATGGTGGTGAAGCCAAAGACAATGAAAATG TATCTGCTTCTGCTTAGTAAGTTAGTACAATACGTATTCAGGGGGAAAAAGTTAGTACAATACGTATTGAGATCTTGCATGGAATTTCACTTTCTATTTT ATGAGCCTCTTTTCCTGTTTTTATTTCATATCATGATTTGAACAGCTTTGGTAGAAGACTTATTTACTTCCTCCAATCACTAATTTCTTATTTTACTTGT ATGATGTGCAATTCAATGGCTAGTGGACCTGCTAGCAATGTGTAGTCAATTAACACTAGTAAAACCTGAATTCAGTCATTGTCTTGTGTACTAATAATTG TTGTGTTAAGTTGGTACTGGAAAAGTGGC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_67787; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_168537
| Blastp | Zinc finger CCCH domain-containing protein 37 from Arabidopsis with 65.74% of identity |
|---|---|
| Blastx | Zinc finger CCCH domain-containing protein 37 from Arabidopsis with 53.7% of identity |
| Eggnog | zinc finger CCCH domain-containing protein(ENOG410YAW6) |
| Kegg | Link to kegg annotations (AT3G12680) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019449304.1) |
| Pfam | Zinc finger C-x8-C-x5-C-x3-H type (and similar) (PF00642.23) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |