Id Trinity | FTRINITY_DN57333_c1_g1_i3 |
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Name Transcript | Ll_transcript_168980 |
Sequence | TTCACATGCTGCTCAGCAAACACACACGTGGACACTCAACACCAAATCTAGAAACCTCTTCAAATCTCAACCTTCTCACTTCTTCCTCTCCAAAATCCTT CCCCTTTCTCCTTCCAAATCTCACTATGCAGTACAAGAATCTAGGCCGCTCCGGCCTCCGCGTAAGCCAGCTCTCCTACGGCGCATGGGTCTCCTTCGGC AACCAGCTCGACGTCAAGGAAGCCAAGTCCCTCATGCAATGCTGCCGCGACCACGGCGTCAACTTCTTCGACAACGCCGAGGTCTACGCCAACGGCCGTG CCGAAGAGATCATGGGCCAGGCGATCCGGGAGCTAGGCTGGAAAAGATCAGACCTTGTGATTTCAACCAAAATTTTTTGGGGTGGACAGGGTCCTAATGA TAAAGGGCTTTCAAGGAAACATATAATTGAAGGGACTAAGGCTTCGCTTAAGCGACTTGATATGGAATATGTTGATGTTATTTATTGTCACCGGCCGGAT ACTTCGACGCCGGTGGAGGAGACGGTTAGGGCGATGAACTATGTGATTGAGAAAGGGTGGGCGTTTTATTGGGGGACTAGTGAGTGGACAGCTCAGCAGA TTACTGAGGCTTGGAGTGTGGCTCAGAGGTTGGATTTGGTTGGACCTATTGTGGAACAGCCTGAGTATAATCTCTTATCAAGGCATAAGGTTGAGTCTGA GTTCCTCCCACTTTACAACAACTATGGCATTGGTCTGACAACTTGGAGTCCACTTGCATCGGGTGTGCTCACAGGAAAATACAAGAAAGGAGCTATACCA CCAGATAGCCGTTTTGCATTGGAAAATTACAAAAATCTGGCGACTCGGTCACTGGTTGACGATGTGCTCAAAAAGGTTGATGGGCTGAAGCCAATAGCAG ATGAACTCAATGTGCCATTATCACAACTTGCAATTGCATGGTGTGCCAATAATCCTAATGTTTCATCGGTTATCTGTGGTGCTACAAAGGAGGCCCAGGT CAGTTTTCACATGCTCAAGACATTTAGGTATAGGAAGCATTCATTCATATTTAATGTCATATTATCTTCAATGATATTTATACCTTCTGCATTAAGCAAG AAATACTTAGTTAGCATTGTCTCTGGCATGGGCATTTTGGATTTCAATTTAGTTAGCATTGTCCTATGATTCTAGGGATGTTTTTTCCTATCAGGTTTAC ACAGCTACCATAAAAGAGAGTAATTGCTTTCCTTTCTAAATGGTTTGGAGAGATTTTCACATCTTCACTAAAAGCACAGTGTTGAGATGTCCAGTGTTCT GTTTTTCTTATGGTATGAACACTTATTATTTAGAGGTGAATGAAGCTAGAATCAGCCTAGATACAGCACATACAATACCTAGATAGTGAGATGGAATCAA CCATGAAATACACTCGTGAAATGACTTCAAAGCCTTCCCTTTCCTTCCTTCCCCTTCAAAATTCAACTCCTAAACAAACACTAAAAGAAAGGTAAAATTT CTAAACGCTGCTCCTTGGTATATTTTTAGAAGGAAACTCTCAAATATAGAATTTGATATGAAAATTCTTCCGAGGCACGTGACTTAATGTTGATCTAAGC TTTTGTAGATATGGAGAAACTTAGAAATCAACCACCATAGGCCGCTAATATTACATTTTGATAAATCTGATAACGAGGAATCAACCTATGCAGTAGGGAA AACAAATAAAGATCCCCAGGAATCCTGATCATACCTGATGGATATGTTAATCTATGTTTATACCTTGACATTATTTACTAGCAATATAGATAATTGAAGA GACAAGCTCCTATAAGGAGAGTAGATCAAATGGAGGCTTGTCAAATTACTCGATGAAGAGGGAGGTCAAGAAAAACCGTAG BLAST |
Tissue | flowers |
Gene name | LI_gene_67837; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_168980
Blastp | Probable voltage-gated potassium channel subunit beta from Arabidopsis with 85.81% of identity |
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Blastx | Probable voltage-gated potassium channel subunit beta from Arabidopsis with 85.81% of identity |
Eggnog | Aldo keto reductase(COG0667) |
Kegg | Link to kegg annotations (AT1G04690) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019431539.1) |
Pfam | Aldo/keto reductase family (PF00248.20) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |