Id Trinity | FTRINITY_DN57345_c0_g1_i3 |
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Name Transcript | Ll_transcript_167611 |
Sequence | ATTCTATTGCATGCCACAAAAACATAAACTTACCTTATGTCTTAAAAAAGTAATATTGAACACAGAATTTATACACTACAATTCTGAGATTCCTTCACTG AAAATTCAGTTACACGTTGTTACTTGCAAACTACCCAACTCCGAACAACGATTCTTTTATTTTCCGCTTCCATCCACGACGGCGATCTCGGCGTTTCTCC GATCACCACCAGGTACGTCCGTCGTTCCTGGATCCCTATTCCGAAATCATATTCGGATCTCACTCATCTAACCCTAATGATTCTTAAATCCCTAATCTTC TTCTCTTTCTTCGTCTTATTTTGCTATGCGGATTCCAATCAAAATTGCAATCGGACCAATCCGTTGGTCGATTCGGAATCCGAATTCAAATTGGTTCAGC ATCAGCTCAGAGGCTACATCAAAGTAATCGATGATTGCTCTTTTAGGGTTTCACAATTTGACATGCTTTCTGGCTCCGATGTGCACTGGTGGGGTGCAGT TTCATCTGATTTTGATAACCTCACCAATGGTTTCATTGTCTCTGATCAGAAACTGAATCAAACTTATGCCAATTCCAGTTTCGTTGTTCGTCTCATGGAA AATGTCACGTGGAATATGATCAACGTTCTTTCCGTTTGGGATCTCCCCACTGCCTCCGATTTTGGTCATGTTGAGTTCCCGAATGTGACCGCGTTGGCGA ATTCTCCGGCGCCATCGCCTGAAGGGGATGGGGAGAAGGAGAATAATCTTGGTCGTGTTCACATGGAGCCAACCATGTTTGAGAATTGTAAGGTTTTGTC GAAAAAATTTAGGGTTCGTTGGAGTTTGAATTTGAAAGAGGATTCAGTTGAGATTGGTTTGGAGGCTGCTACTGGGTTCATGAATTACATGGCTTTTGGA TGGGCAAATCCTAAATCTACCGGCTCTGAGCTTATGCTTGGCGCTGACGTGGCTGTTACGGGGTTTAAGGAGGATTGGATGCCATTTGTGGAGGATTTCT TCATTAGTAAGTATAGCGAGTGTGTGAAAAACAGCGATGGATCGGCGCAAGGGGTTTGTCCGGATTCGGTCTATCAAGGGTCTGATAGAGTTGGTTTGGT GAATGATACATGGTTGATTTATGGGCATAGGAAAGATGGGGTCTCATTTGTTAGATATAGGAGGCCATTGAATAAGGTTGATGGGAAGTTTGATCACCCT GTTGATCATTTAGCGAACATGACGGTTATTTGGGCTTTGGGAAAGATTAGACCTCCTGATACTATCCAATCTTATTATCTTCCTCAGAATCATGGTGGTC TTCCATTTGAGACTTTCGGGCATTTGGTTCTTAATGTTTCAGATCATGTGAATGACTGTGTTGGTCCACTGGATGCTGAAGATAAAGAGGATCAAGATGT CATAATTGCTGATGCTAAAGTTCCGTTGGTTGTTACTTCTGGTCCGGCATTGCATTACCCTAACCCTCCAAATCCAGCAAAGGTTCTTTACATCAACAAT AAGGTTGCTCCTGTGTTGAGAGTTGAAAGAGGGGTTCCAGTCACATTTTCGATACAAGCCGGGCATGATGTTGCACTTTACGTTACTTCAGATCCTATTG GTGGGAATGCTACGCTGAGGAATCTGACTGAGACTATTTATGCTGGAGGTCCTGCGGCTGAGGGAGTTAAAGCCAGTCCTACTGAACTTATTTGGGCTCC TGACAGGAACACTCCTGATAACATCTACTATCATTCATTGTATGAGCGGAAAATGGGTTGGAGAGTTGAGGTGGTTGAAGGGGGTTTATCTGACATGTAT AACAACAGTGTTGTTCTGGATGATCAACAGGTTACCTTCTTTTGGACACTGTCAAAGGATTCCATATCTATTGCTGCTCGTGGTGAGAAAAAGAGTGGTT ATCTTGCAATAGGGTTTGGAAGTGGAATGGTAAACAGTTATGCTTATGTTGGCTGGATTGATGATAATGGCGTAGGTCGTGTAAACACTTACTGGATTGA TGGAAAGGATGCTTCAAGTATACATCTTACAAACGAGAATTTGACATACGTGAGATGCAAAACAGAAAATGGCATTATTACTTTGGAGCTTACACGTCCC TTGAATCCATCTTGTAGTGGTGAAAATAGGCCAGAGTGTAAAAATATCATTGATCCCACGACTCCACTAAAAGTTGTTTGGGCAATGGGTTCTAGGTGGA CTAATGACCATCTCAGTGAAAGGAACATGCATTCTTTTAAGAGTAGTAGGCCTATACTTGTACTGCTGATGCGCGGTTCTGCAGAAGCAGAACAGGATTT GCTCCCTGTTTTGGTTGTACATGGCTTTATGATGTTTCTCGCATGGGGTGTCTTGCTTCCTGGAGGTATTTTGGCAGCCAGATACTTAAAACATCTTAAG GGTGAAGGGTGGTACAAGATTCATGTTTACTTGCAATACTCTGGGTTATCAATTGTTCTACTTGCGCTTCTCTTTGCAGTTGCTGAGCTTCGGGGATTTT ATGTCAGCTCAGCACATGTTAAATTTGGAATTGCTGCGATAATTTTGGCTTGTGTTCAGCCGGTGAATGCATCCTTAAGGCCTCAAAAACCAGCAAACGG GGAGCAGGCATCATTTAAGAGGGTTATTTGGGAATACTTCCACATAATGGTAGGCAGATCTGCCATTGTTGTAGGCATTGCAGCACTTTTTACTGGGATG AAACATTTGGGAGAGAGATACGGTGCGGAAGATGTCCATGGACTCAACTGGGCACTGGTGATTTGGTTCTTACTTAGTGCATTGGCTGTTATTTATTTGG AATACCGCGAAAGGCAACAAATAAGTCGACGGATATTTGGAAGAAGCAATTGGGTGCTTGGCAATCTAGAGGAAGATGATTCAGTCGATCTCTTGAGGCC GACTAGTGCACCTGCAGATAAAGAGCCACAAGCCAATGCAGTAATGGAAGTCCAGTTAGAACCTTTGAACAGATAGATGCATATTTGTATTTTATTTTGA TAGAAGCTCTCCAATCTGCAACGATGTTTTTTTGCAAACTTCTCATTAGTTTATTAGGGAATTTTGAGGTCTGAAGGTAGCACCTGTCTCTGTTGGACTG GTGTGCTATTTTGTGAAGAGTAGCTTTCCTATAGTCATACATGTTCATCAGAATAGGTTATATCATTTCTTCACTCTAGCTGTTGTACTATTTTTATTTT TTTATTTTCCCACTACAAAAAAATCTAAATAAGAAAGACAGAAGATATCAAATACTACAAAGTGAAAGCTTTCTTTTGGATAAATGTTGGTTCTGGATTG TATCCTACATATACTTCAGACTTTGGAAGGCTATCAAGCCAAAAGCATTATTGTAACTTATTGTTATTTTCATGTGGCTTGTCTTTAATTTAGGCCTTTT TGGTGGTAAAACAAGACCGGCTTCCACTGTCAAGAACTCAAGATAAGAAAATCACCCCTTTATCATGTGCTTTGGTGTGTCTTTTTATTTGGCATCAAGT ATTTTACTTTTACATGCAAAAGCTTTGGAAGTAGAGATTTTTAATGCAATCAACAGGTGTTTTTACCTGTAATAATGCATTGTTTCAAAAGCTTTAAAAG GAGAGAGCTTTTCAAGCAGACACCAAGTTTTTGAATGTTTAAAACAGTCCATTGTTGCATCAAGCTTTTAAAGTTGAGATTTTTTAAACCAAACATCAAG TGTATTCTTACAAGTTACAACACTAGATTTTAAAGAAGAGACCTCTTTACTCCAAATGCCAATTTTTCAATCTGTAGATTTTTAGTCTGTGTTCATTATA ATATCACTTGCTCATGTCAAGGGATTTCTATATGTCATGATACTGATTGGATTTTTTATACACCATGAGACTGTTGGGTTTTTTGTTGAAATTTCAACTG TCCAATGGTTTTTCAAGGTCATGTATGTTGTATTATTTCACAATTTGTGTATTGTTTGTTATCCTGACCTGACTAGATTATGAGAATGTTAAATATTCTA GCATCATCTGTTATCCTTACTTGACTAGACAATCTTCTGTAGGTACTATTTGATGTTGTTCCAACTTCCAAGCATTAAATTCGGCTAAGCCATTGCTGTT AGAAAGTGTTTTTGGAGGTATTTTTAGTATCAAAGTTGAGTAAATCTAAAGATGCTTGGGAAATGAATAGTCCTGAAAGCAGGGCTGTCAAATTTCTGTA CAATTAGCTGCTGGCAATTGGGGAAGCCTGGGCAGATCAAGCATGAGCACCACCCAAAATCCAGGACCTCAGATTGAAAAAGATCATTCACTGTGATCAT TGTAGAGTTTTCCGAAAAGAAAAAGTATAATCAAGCTGACTAAGCACTGTAGAAGTATAATCAAGATGAAATAGAAGTAAGTCACCTCTGAAGAAAAAGG AAGAAAGTTGACATGTGCTGCTTTGTAAAGCACAATTCAGAGTTGTTTGATTGGAAAATGCAAAGTGTACGTTATGCACATACCAGACGAATACGAGCCC AAACCTAGAGCTCTTACACCACTGGTCAGAGGAGGATGCCTTGAATGAGGAATCATGTTAAGTAGGTTCTAAGACTTGTGATCACTAAGGCAGATACCTT AGATTTAGGGACTTGAAGTCCCTTCAGAATGAGTAGGCCTGACTTGAAAGTCCCTTTATCAGAATCTGTAAATGTGTATTTTCTTTTTTCAATTTGAAAT TATTTTTCAACCTGAGGCAGTTTTGGTAGAAGATTATTATAAATATAGTTTTACTCTGATTTATTTGGTTGTGGCTATTTATCTATTATGCATTAGTCAA TTGAATTTATGTTGTGTAAGAGGCTTATTTGTAATGTTGATGCCATGTTGTGAAAGCTGGACTGGATAATAAATTAGTAGAGGTTCCATTTTGGATTTGA CCAGTTTTAAGGTTAGATTGGTTGGTCTAGCCAGAAGACATAACATATATTTATATTTATATACAACAATAAATCCTGATCCAATTAAGTGAGATCCGAT ATATATGGATTGAACGTTATCATAATACTCTTATTTGTAAATATATTATATTTATATAAAAGGGGAGAAATCATACTAGAGTTAAATTGCAG BLAST |
Tissue | flowers |
Gene name | LI_gene_67937; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_167611
Blastp | Cytochrome b561, DM13 and DOMON domain-containing protein At5g54830 from Arabidopsis with 65.93% of identity |
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Blastx | Cytochrome b561, DM13 and DOMON domain-containing protein At5g54830 from Arabidopsis with 65.93% of identity |
Eggnog | domon domain-containing protein(ENOG410XSWZ) |
Kegg | Link to kegg annotations (AT5G54830) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019430888.1) |
Pfam | Electron transfer DM13 (PF10517.8) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |