| Id Trinity | FTRINITY_DN57355_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_167964 |
| Sequence | GTTAATGGACAAGTTGATTGGTATGGGGTCCTTGCCACGCAACCCTCGGCTGATGATGCAACAATTCGAAGATGTTATCGGAAACTGGCTCTTATGCTGC ACCCAGATAAGAATAAATGTGTAGGTGCAGTTGACGCATTTAAACATATCACACAGGCATGGAGCTTATTATCAGATAAAGACAAGAAAGTCATCTATGA CCAAAACCGAAATTCATGGGGTAGATGTGAAAAAGTTCCAGGCCGAAAACCTTCTGTACCAGCTCATCAGAATGGTTTCTGTAATAATATATTCAACACT GCTAACCGCAAGGATAAAGATCCTAGAAATGGTACTCATCCCATTCCTTCACCAGTATCACCTGTGACATTGAAACAGACATTTTGGACCAGGTGCAATT CCTGCAGGACACAATTTGAGTACCATACTGCTTATATCAACTGCAAACTTATTTGCACTAGCTGCCGTCAGTCCTTTTTGGCTCATGAGGAACCACCCCC ACCTGTATACAGAAATGGGTCATCCACGTCAAGAATTTCGCAGGTGAAGCAACATAACTTCAACTCAACCAGAACTGAAAAAAACTGCCATGCTTCTGTG GGGAATGTTTCTGGTCCAACTTTGAAGTCCTCTTTAGGTCCAAATTCTGTTTTCATAGGAGATAGTTCAAGGAAAATAAGGCGCACACATGAAAATCAAG TACATGGCGATGCAAGAGAGAGGGAAACCAAAGTTGCATATCAAAATGGAGGAGTAAGATTGCCTAGTGAATTCGGGCCTCAAAAGGATAATTTGGATAT TAGAGGAAGGGCTAATGCTGCTGGAAATTACAAACGGAATGGTGCTAGGGAAGTATCACAAATGCAAATGAAGAACATGTTGATGGATATGGCTCGAAAG GTCATTCGTAGAAAGCTTGATGAATGGATTAATTCTTCTGTATCAAAGATTTCAGAAAAACCAAAAAATACTAATGCAGAAGTCAGAAAGAAGAACAAAG AGAGGGCTATAAGTGGGGTAAAACATGCTGCACCAGAATTTGTTCATTCTGAGACCATAGGCAACAAGTGTTTTTCTGCTGACTCAGAAGTAACTGAGTC TCTAACCATGAGTGTTCCAGACCCAGATTTCCATGATTTCGATGGAGACCGTATTGAAAATGCCTTTTGTGAGAATGAAGTTTGGGCTGCTTATGATGAT GATGATGGCATGCCACGCTTCTATGCTTTAATCAACTGTGTGATTTCAAAAAAGCCTTTCAATATGAGGATCAGTTGGCTTAGCTCTAAGACCAATGATG AATTGGCCCCAATTAAGTGGGTTAGTGCTGGTTTCGCCAAAACTGTTGGGGACTTACGAATTGGCAAGCGTGAAATTTCTACCACTCTTAATACCTTCTC GCACAGGGTTAAGTGGACTAAAGGTTCTAGAGGGATTATACATATATATCCTAAGAAAGGGGACGTTTGGGCTCTGTTTCGAAACTGGTCTGTTGAATGG AATGAATTTACGGAAGATGAAATCATACATAAGTATGACATGGTGGAAGTGCTTGAAGACTACAGCGAGGAGCGAGGTGTAGATGTTGCCCCGCTTGCTA AAGTTGCAGGTTTCAAGACAGTATTCCGCCAGAATGCAGATCCAACAAAAATCAGGAATATTCCGAAGGCAGAGATGTTTCGCTTCTCACACCAAGTACC TTCATACTTGCTTACCGGTCAGGAAGGTCCAAATGCTCCTAATGGTTGCTTGGAACTTGATCCTGCTGCTACACCCATGGAACTTCTCCAGACAGCCATA AAAGAAGGTCCAGAGCAAGAAATGACAACAGAGAAATCTTCAAAAGATGAACCACAGCCCAATGTTAATTCCAGGGAGGATACCATTGAAGATGTTCCCA GAAAAGAGGTCGCGGAAGCAATGAAGAGAAAAGAAAGCAGGCCTGAGATTTTGTTTGTATACAAGCGGAAGCGTTCGAAAGGTCTGAATTAGAGCCAGAT ATAGACCTCTTAATTTTTCTTTTATGCTTTTAGTGTTAAACAATGGAGAATGAATTTTGCTGCATTTGTAGAGACCAATTATGCAGCTTTTGTTGTTTTT GCTGTATGTTTGTGGGGCTGCAGTTTTGGTTCAAGTGTTGGAGTTGCACTCAAGACTAGTTTCGGCTGAATGTGAGCCTGCCTGAAATGCCAACTAGTTA CTACAGTTTTTATTAGTCAATAGTAATAGTATGCATCAGTTAGTCTTGATCCTTACTTTTACGGTTTTAAAGGAAATACATTAACTTATCTTCTAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_68015; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_167964
| Blastp | DnaJ homolog subfamily B member 12 from Mus with 47.62% of identity |
|---|---|
| Blastx | DnaJ homolog subfamily B member 12 from Mus with 47.62% of identity |
| Eggnog | ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484) |
| Kegg | Link to kegg annotations (56709) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019434582.1) |
| Pfam | DnaJ domain (PF00226.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |