| Id Trinity | FTRINITY_DN57355_c0_g1_i8 |
|---|---|
| Name Transcript | Ll_transcript_167970 |
| Sequence | GGGCTTTCTCAATTGCTGGCAGCCATTGCGGTGAATAGCTCTGCTGAAAGAAGAGTTAATGGACAAGTTGATTGGTACGGGGTTCTTGGCGTGCAACCCT TGGCTGATGATGCAACGATTCGAATTTGTTATCGGAAACTGGCTCTTATGCTGCACCCAGATAAAAATAAATCTGTAGGCGCAATTGAAGCATTTAAATT AATCACACAGGCATGGAGTTTATTATCTGATAAAGACAAGAAAGTCGTCTATGACCAAAACCGAAATTCATGGGGTAGATATGAAGAAATTCAAGGTAGG AAACCTTCTGTACAAGCTCGTCAGAATGGTTTAAATACTGCTAACCACAAGGATAGAGATCATAAGAATGGTACTCATCCCATTCCTACTCCAGTATCTC CTGCGACATTGAAGCAGACATTTTGGACCAAGTGCGGTTCCTGCAAGACACAATTTGAGTACTATACTCTGTATATCAACTGCGAACTTATCTGCCCGAG CTGCCATCAGAAATTTAAGGCTCATGAGGCACCACCCCCACCTGTATCCAGAAATGGTTCATCCACTTCAAGAATTTCTGAGATGAATCAACATAACTTA AACTCAAATAGAACTGAAAGAAGCTGCCATGCTTCAGGAAGGACCCCAATTTATGCTAACCCATCACTTGGGTCGGGTCATTTCTCTATGCTCGGTGGTA TTTCCGCTGTACCGACATCAGCTTCTACTGCTGCAGAAGCTCCTGGCGTTTATGGAATGCTATCTGAGAATTTGAAGAGACAGCGTGAAGATTCAACTCC TATCATCAGGGAGGAGCACCATTTTGGGGAAACTCATGCTGTTGTGAGAGATGTTTCTTCTTCAGCTTTTAAGTCTTCCTGTTTTGCTCCAGATTCTGTT CTGATAGGAGATAGTTCAAGGAAAATAAGGCGCACAGATGAAAATCAAGTACATGGTGATGGAAGAGACATGGAAACCAAAATTGCATATGAAAAAGGAG GAATAAGATTGCTTAGTGAACTCAGGTCTCAGAAGGATAGTCTGGATACCAGAAGCATTGATGCTTCTGGAGTTTGTAAAGATAATGATAATCAGGAACT ATCACGAGTGCAGCTAAGGAACATTTTAATGGAAAAGGCTCGAAAATATATTCATAAAAAGCTTGGTGAGCGGAGGTCTACTTCTTTACTGAGGAATTTA GCAAAGCCATATAGTACTATTGCAGGAGGTCGAGCGAAAAATAAAGAAAGGGCTGTAAGTGGGGTAAAACATGCTGCTCCAGAATTTGTTGCTTCTGAGA CCATAGGCAACAAGTGCTACTCTGCTGACTCAGAAGTAACTGAGAATCTTACCATGAGTGTTCCAGATCCAGATTTCCATGATTTTGATGGGGACCGTAC TGAAAACGCCTTCGGTGATAATCAAATCTGGGCTTCTTATGATAATGATGATGGCATGCCACGCTTCTATGCTTTTGTCTACAATGTAATCTCAAAGGAA CATTTCAAGGCGAGGATTAGTTGGCTTAGCTCTAAGACCAATGATGAATTGGCCCCAATTAAGTGGGTTAGTGCTGGTTTCGCCAAAACTGTTGGGGACT TACGAATTGGCAAGCGTGAAATTTCTACCACTCTTAATACCTTCTCGCACAGGGTTAAGTGGACTAAAGGTTCTAGAGGGATTATACATATATATCCTAA GAAAGGGGACGTTTGGGCTCTGTTTCGAAACTGGTCTGTTGAATGGAATGAATTTACGGAAGATGAAATCATACATAAGTATGACATGGTGGAAGTGCTT GAAGACTACAGCGAGGAGCGAGGTGTAGATGTTGCCCCGCTTGCTAAAGTTGCAGGTTTCAAGACAGTATTCCGCCAGAATGCAGATCCAACAAAAATCA GGAATATTCCGAAGGCAGAGATGTTTCGCTTCTCACACCAAGTACCTTCATACTTGCTTACCGGTCAGGAAGGTCCAAATGCTCCTAATGGTTGCTTGGA ACTTGATCCTGCTGCTACACCCATGGAACTTCTCCAGACAGCCATAAAAGAAGGTCCAGAGCAAGAAATGACAACAGAGAAATCTTCAAAAGATGAACCA CAGCCCAATGTTAATTCCAGGGAGGATACCATTGAAGATGTTCCCAGAAAAGAGGTCGCGGAAGCAATGAAGAGAAAAGAAAGCAGGCCTGAGATTTTGT TTGTATACAAGCGGAAGCGTTCGAAAGGTCTGAATTAGAGCCAGATATAGACCTCTTAATTTTTCTTTTATGCTTTTAGTGTTAAACAATGGAGAATGAA TTTTGCTGCATTTGTAGAGACCAATTATGCAGCTTTTGTTGTTTTTGCTGTATGTTTGTGGGGCTGCAGTTTTGGTTCAAGTGTTGGAGTTGCACTCAAG ACTAGTTTCGGCTGAATGTGAGCCTGCCTGAAATGCCAACTAGTTACTACAGTTTTTATTAGTCAATAGTAATAGTATGCATCAGTTAGTCTTGATCCTT ACTTTTACGGTTTTAAAGGAAATACATTAACTTATCTTCTACâBLAST |
| Tissue | flowers |
| Gene name | LI_gene_68015; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_167970
| Blastp | DnaJ homolog subfamily B member 12 from Mus with 47.95% of identity |
|---|---|
| Blastx | DnaJ homolog subfamily B member 12 from Mus with 47.95% of identity |
| Eggnog | ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins (By similarity)(COG0484) |
| Kegg | Link to kegg annotations (56709) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019458975.1) |
| Pfam | DnaJ domain (PF00226.30) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |