Ll_transcript_168565

• Id Trinity: FTRINITY_DN57365_c0_g1_i15
• Name Transcript: Ll_transcript_168565
• Sequence: ATCGATTGAATGTATATAAGCTCAACCCAAACTTAATTTTTAACTAGAGAACCCAAAAATCTGAAGGAAGAAGAAAGAAAGAAGAAAAGAAGAGTGAGAA AGTGAATAAAAACCTTAAAACATTTTATTATTATATATATAAATTCTTTGTTACTGCAATTTCCTCTTCCCCCACGCAACAAATAACACCAAAACAAAAC CAAAGCCCTCGTCTTTTCTTCTTTCTCATCTCCATTTTATTCGATCAATTTCACAACTTCTCTTATCTCTTCGAATCTCTCACTTTTCCCCAAATTCTCT TTCTGGAACCTTGGCACAACCATTTATGTCATTTGGGGCATGGACAGGCTATTTATTCCCCTGCCAGTGTCTTTGAACAATGTTTAGCAGACCAAGAGAT CCAAGTGCTTTCAGTATTTTCAAATGGAAACGTCAAGATGAATCATCAGTGACAACAGGTTTACTTCAGGATGTTCTGCCCGAGATTGAGTTGTCTGATT ATAGAAGGATCCCAAGTCCAGGTAGTGAGAGTCCTTCAGGGCTTCTTAATGGTGAAAGCCTAAATGCAGAACCGATTCCTGACTTGGATCTATTCTTTGA AAGGCTTTACAGCTACTACTGTGAGAAAGGACTTTGGTGCATCATTATAAAGTGGATTGTTGAACTTTTGAGTCTAGGGTTCACGATATGTTTTTCAGGA TTCTTTTTACTGTATGTTGATTGGAATGGCCTTCGTAATGCAAAGTGTGGGATGGGTGCAGTTGAGTATGGAATCAAGCCCTGTGATCTTGCTAAAGAAG CTCTTCATCAACACCCTTTGACTCCATTAACACCTAAGAAAGTTATTATTGTCGGATACTTGGGAATATTTTCCATCTATTGGATATTTTGCTTCTTGAG ATTTTTCGCTCAACTAAAGTGTACTCTGGGAATCCGGCAGTTTTACTACAATAGTCTCCATGTTACCGACAATGAAATTCAAACCATGCCCTGGGCTACA GTTATTGAAAAAGTTGTCCAGATGCAAAGCTCGCAACAACTATGTGTGGTAAAGGATCTTTCTGCTCATGACATGGTGTTGAGGTTGATGCGGAAAGAAA ACTACTTGATTGGAATGATCAACAAGGGTGTGCTTGCGTTCCCCATTTCTCAGTGGGTCCCAGGTGTTGGACCTACTGTGAAATCTGGTCCTAATGGAAC ACAATATCGCCTAATACTAACCAAGACCCTTGAGTGGACTTTGAATTGGTGCATCCTGCAAAGCATGTTTGATCGAAACTTCTGTGTCAGAATGGATTTT GTATCAAATCCAAGGACATTGAAGAAAAGGCTTATGGTAGTTGGGCTTGCAATGCTTTTACTCTCTCCATTTATAGTCATATTCATGCTGGTATATCTCT TTCTGAGGCATGCTGAACAGTTTTATAATCACCCAAGCACAGCATCCTCTCGAAGATGGTCAAATTTGTCAAGGTGGATCTTTAGGGAGTTCAACGAGGT GGACCATCTCTTCAAGCATCGGATTAATAGCAGTGAATTACATGCTTCTGATTATCTCAAGCAATTTCCTTCACCTATCATATCTATCACTGCAAAATTC ATCTCCTTCATGTCGGGTGGTTTTGCTGCAGTTCTGATCATCATTGCTTTTCTTGAGGAGTCTCTGCTAGAGGGTCACATATTTGGTCGGAACCTGCTGT GGTATGCTGCTGTTTTTGGAACTATAAC
• Tissue: flowers
• Gene name: LI_gene_68094;
• Additional information: details;

Expression of Ll_transcript_168565

FPKM

• FPAB: 1.6
• FPNAB: 1.1
• LF1: 1.7
• LF2: 1.5
• LF3: 0.4
• LF4: 1.1
• UF1: 1
• UF2: 0.2
• UF3: 0.7
• UF4: 0.4

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_168565

• Blastp: Autophagy-related protein 9 from Arabidopsis with 80.89% of identity
• Blastx: Autophagy-related protein 9 from Arabidopsis with 80.89% of identity
• Eggnog: Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Cycles between the PAS and the cytoplasmic vesicle pool and may participate in supplying membrane for the growing autophagosome(ENOG410XQBE)
• Kegg: Link to kegg annotations (AT2G31260)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019434383.1)
• Pfam: Autophagy protein Apg9 (PF04109.15)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;