| Id Trinity | FTRINITY_DN57365_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_168551 |
| Sequence | ATCGATTGAATGTATATAAGCTCAACCCAAACTTAATTTTTAACTAGAGAACCCAAAAATCTGAAGGAAGAAGAAAGAAAGAAGAAAAGAAGAGTGAGAA AGTGAATAAAAACCTTAAAACATTTTATTATTATATATATAAATTCTTTGTTACTGCAATTTCCTCTTCCCCCACGCAACAAATAACACCAAAACAAAAC CAAAGCCCTCGTCTTTTCTTCTTTCTCATCTCCATTTTATTCGATCAATTTCACAACTTCTCTTATCTCTTCGAATCTCTCACTTTTCCCCAAATTCTCT TTCTGGAACCTTGGCACAACCATTTATGTCATTTGGGGCATGGACAGGCTATTTATTCCCCTGCCAGTGTCTTTGAACAATGTTTAGCAGACCAAGAGAT CCAAGTGCTTTCAGTATTTTCAAATGGAAACGTCAAGATGAATCATCAGTGACAACAGGTTTACTTCAGGATGTTCTGCCCGAGATTGAGTTGTCTGATT ATAGAAGGATCCCAAGTCCAGGTAGTGAGAGTCCTTCAGGGCTTCTTAATGGTGAAAGCCTAAATGCAGAACCGATTCCTGACTTGGATCTATTCTTTGA AAGGCTTTACAGCTACTACTGTGAGAAAGGACTTTGGTGCATCATTATAAAGTGGATTGTTGAACTTTTGAGTCTAGGGTTCACGATATGTTTTTCAGGA TTCTTTTTACTGTATGTTGATTGGAATGGCCTTCGTAATGCAAAGTGTGGGATGAATGCAGTTGAGTCAGGAATTAAGCCTTGTGATCTTGCTAAAGAAG CTCTTCATCAATACCCGTTGACCCCGTTAACACTTAACAAATCTATTATTGTTGGATACTTGGGAATATTTTCCATCTATTGGATATTTTGCTTCTTGAG GTTCTTTGCTCAACTAAAGTATACTCTGGAAATCCGACAGTTTTACTACAATAGTCTCCATGTTACCGACAATGAAATTCAAACCATGCCCTGGGCTACA GTTATTGAAAAAGTTGTTCGGGTGCAAAACTCACAACAACTATGTGTGGTAAAGGATCTTTCTGCTCATGACATGGTGATGAGGTTGATGCGGAAGGAGA ACTACTTGATTGGAATGATCAACAAGGGTGTGCTTGCGTTCCCCATTTCTCAGTGGGTCCCAGGTTCTGGTCCTACAGTGAAATCTGGTCCTAATGGAAC ACAATATCGCCTAATACTAACCAAGACCCTTGAGTGGACTTTGAATTGGTGCATCCTGCAAAGCATGTTTGATCGAAACTTTTGTGTCAGAAGGGATTTT GTATCAAATCCAAGGACATTAAAGAAAAGGCTTATGATAGTTGGGCTTGCTATGCTTTTACTTTCTCCATTTCTTGTCATATTCATGCTGGTATATCTCT TTCTGACACATGCTGAACAGTTTTATAATCACCCAAGCACAGCATCATCTCGAAGATGGTCAAACTTGTCAAGGTGGATCTTTAGGGAGTTCAACGAGGT ATTTTGTAGCTCATTTATTCTTGCATGGGTTTCATGTTAGCATGTTCAAATTATCACCATGCATGAAAGTTGTGAAGTTATGAACAGTTATTAACAAATA TGTTAGCTTTGCCTTTGGCTAGCAAGGTGTTAGAGATAGATTGCAACATGACACGTGGGCTCATGCAGACTTTTCTACTTAAGTGTGCCAGCCCAAGTTA TACAATTCCATCTGACTCCAATCAATGTGGGCCTTATTACGATATGCTCACTTGTCCTTGCATATATTTTGAATCTGGTCTTTAATTCTTTATGAAACGT TAATGAATGAAATTAAGCGTCAGTCTTCATTTTAGTTGTTTAACTCAGGTTATTTGAAGAAACCTCTAGATTACGAAGTGCAGAGCTATAAATTTTATAT GGTATTTTGAAAATTGTGTTGTAAATGGCTCACTTGTACCTTGATGATAAAGGCGTCACTTGTTTGAATGTGATATTAACTATTAATAGGTCAAAAGTGC TAACACCTATTTATCATTTTTAGCATAAGTCACTTGTATATTTTTTCCTTTGGTGCTTAAACTTACCATTAACTTGTGCTATAGGTGGACCATCTCTTCA AACATCGGATTAATAGCAGTGTATTATATGCTTCTGATTATCTCAAGCAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_68094; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_168551
| Blastp | Autophagy-related protein 9 from Arabidopsis with 78.93% of identity |
|---|---|
| Blastx | Autophagy-related protein 9 from Arabidopsis with 78.93% of identity |
| Eggnog | Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Cycles between the PAS and the cytoplasmic vesicle pool and may participate in supplying membrane for the growing autophagosome(ENOG410XQBE) |
| Kegg | Link to kegg annotations (AT2G31260) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019433827.1) |
| Pfam | Autophagy protein Apg9 (PF04109.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |