Ll_transcript_166382

• Id Trinity: FTRINITY_DN57367_c0_g1_i26
• Name Transcript: Ll_transcript_166382
• Sequence: CGCATAGTGTGCATGTGCCATCATTTCTCTTAAAAATCTGAAGCTAGAAGCTAGTTACTTCTACTAACTTTTTTCAAAAAACACATAACAAAACTAAACT ACACATAGATTCAGTTAAGAGAGAAAACAAAGGCGAACGAAACTGAAGAAGAACCAAATCTCTTCGATCATTTCTGATCCAATCCACAAATGAAGGCTAT TAACCCTCACATAACATTCGAACACAAGAGGGATGCATATGGATTTACTGTGCGACCTCAGCACCTGCAAAGATACCGCGAATATGCTAACATATATAAG GAAGAAGAAGAGGAAAGGTCAGATCGATGGAACTCATTTCTAGAACGGCAGGCTACGTCTTCTGAATTGGCAACAGAAAGATTAGGTGTGGAGGAAGACG AGACAGTTTTGAGGGCTCAAGCTTCAGAGGAAGAAACTGATGATAACTTGAAAAAGGGTGTTGACGGAGATGAATTAAGCAGTGGGAAGCCTGGTTCTGA TGGTACAGCTGAAAATGGTGGTCAGAAAGAGGAGGTACCGGCATCTGATGAGACTAAGGTTCATAGATCCCAATTATGGACAGACATAAGACCATCTCTT CGTACTATTGAGGATATGATGAGTACTCGTGTAAAGAAGAAAACTGCATCAGTAAACAATGTTGGAGATGGAAAATCACTGTCTCATATTGATGGTGCAA AATCACAAAAAGGAGCATACGAGGAAGACTCTGATGACGAGTTCTATGATGTTGAGAGGTCAGATCCTAGTCCAGATACGCCTCTAGTTGATAATACGAG TGTGTCTGCAAATGGTCTTGCTGCCGATGCTGCACCATCAGAAGCTCCATGCCCTTGGAAAGAAGAGTTGGAAGTTCTTGTTCATGGGGGAGTGCCAATG GCACTGAGGGGAGAGCTTTGGCAAGCTTTTGTGGGTGTCAAAGCAAGACGCGTGGAGAAGTATTATCAGGATCTACTAGCTTCGGAGAATGAATCTGAAA GAAAAACGGATCAGCAAAGTATACAGTCAAAGGATGATAATGGGATACCCACGGCAGATCCTGTACCTGTGCCAGAAAAATGGAAAGGACAGATTGAGAA GGATCTGCCTCGAACATTTCCTGGTCATCCTGCTCTGGATGAGGATGGTAGAAATGCCCTGCGGCGATTACTTACTGCATATGCTCGACATAATCCCTCA GTTGGTTACTGCCAGGCCATGAACTTTTTTGCTGGCTTATTGCTGCTTTTGATGCCAGAAGAAAATGCCTTTTGGACCATGATGGGAATTATAGATGACT ATTTTGATGGCTATTATTCAGAGGAAATGTTAGAGTCTCAGGTGGATCAACTTGTTTTTGAGGAGTTGGTGCGGGAGAGGTTTCCCAAATTGGCCAATCA TCTAGATTATCTAGGAGTGCAAGTAGCATGGGTTACTGGACCATGGTTCCTTTCCATTTTTGTGAACATGCTTCCTTGGGAAAGTGTTCTTCGAGTGTGG GATGTGCTTCTTTTTGAAGGAACCCGAGTGATGCTATTTAGAACTGCAGTCGCTTTAATGGAGCTATATGGTCCAGCATTGGTAACAACTAAGGATGCTG GAGATGCAGTTACTTTACTCCAGTCATTGGCTGGCTCCACATTTGATAGCAGTCAGCTTGTATTGACAGCTTGCATGGGTTTCCAAAATATAAATGAAGT TAGATTGCAAGAGCTGAGGAATAAACATCGGCCAGCTGTAATAGCTGCAGTTGAAGAAAGATCAAAAGGGCTTAAAGCTTGGAGGGATTCTAAGGGCCTG GCGTCAAAGCTATTTGGTTTTCAACATGATCCTAAAATGGAGCAATCGGGGAGCTTATCTCGTTCAGAATCCGGTTCCACTAATGCAGAGGAAATTCTGA TTAGTCTGACTGGGGAGGGTGAGATTGATTCTGTTCCAGATCTTCAAGAGCAGGTTGTCTGGCTGAAGGTTGAACTTTGCAGATTACTAGAGGAGAAAAG ATCGGCTATTCTCAGAGCGGAGGAACTTGAAACAGCATTAATGGAGATGGTCAAGCAGGATAATAGGCGGCAACTGAGTGCCAAGGTTGAGCAACTAGAG CAAGAGGTTGCCGAGCTTCGACAGGCACTTGCTGATAAGCAAGAACAGGAAACTGCTATGATCCAGGTCTTGATGCGGGTGGAGCAAGAACAAAAGGTGA CAGAGGACGCTCGCAGGTCTGCGGAGCAAGATGCATCAGCACAAAGATATGCCGCCCAAGTGCTTCAGGAAAAGTATGAAGAAGCGACTGCTGCATTTGC TGAAATGGAGAAAAGAGCAGTTATGGCAGAGTCTATGCTAGAGGCAACATTGCAGTATCAGTCTGGCCAAGTTAAACTGCAACCTTCTCCAGGATCCTCA CGGCCAGACTCTCCAGCATCAAAAAACAATCAAGAGCCTAAGAGGATAGGCTTGTTTGGACTCGGATGGCGTGATCGAAACAAGGGAAAACCCACTGTGG AAGAGCCAGCTGAGGAGAAGCCCGTCGTAGAGGCAGAAAGTACAACCAACAAGATGGTGGCGGAGGCACAAATGAACCAACAAGACGGCAATGGCCTTGT AGTATAGCATGAATAGGAAAGGAGGTACTACCAAGATTCTGTCTATGAGGAGGAGCATGTAGTTAGTTCCTTTTTCCTTGTCTGTGATTTTTGTTCAGGG TGAACATATGTTATTATGTTTCATATTATTCATTAATTGGTTGTTCCTTATGATGTAATAATAGAATAATAGTCCAGTTCATCATCTGAGGCTGCTAGTT TATCATCAGAGATTGATTGATCATCTTCCAAACAAAAACCCTACGCTTGAAAAAATTAGATGTCAGCGACCCTCAAGTAAATATGAATGTATC
• Tissue: flowers
• Gene name: LI_gene_68101;
• Additional information: details;

Expression of Ll_transcript_166382

FPKM

• FPAB: 9.4
• FPNAB: 19.4
• LF1: 20.3
• LF2: 14.2
• LF3: 8.9
• LF4: 9.7
• UF1: 17.5
• UF2: 16.8
• UF3: 8.6
• UF4: 7.5

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_166382

• Blastp: TBC1 domain family member 9B from Mus with 28.26% of identity
• Blastx: TBC1 domain family member 9 from Homo with 31.25% of identity
• Eggnog: TBC1 domain family member(COG5210)
• Kegg: Link to kegg annotations (76795)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019452541.1)
• Pfam: Rab-GTPase-TBC domain (PF00566.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;