Ll_transcript_166389

• Id Trinity: FTRINITY_DN57367_c0_g1_i31
• Name Transcript: Ll_transcript_166389
• Sequence: ATTTCTCCCCCAACAACTCACTACACACTAAAAATACTTTCAGTTAAACAGAGAAAACGAAGGCGAAAGCGAAGGTTAAGAAGATTAAGATTTTCTCAAC CGAAAATTTCTCGCTTCAACGTTCGATTATTCGGATCCAATACTCAAATGAAGGCTATTAATCCTCTCATCACTTTCGAACACAAGAGGGATGTATATGG ATTTACTGTGCGACCTCAGCATCTGCAAAGTTACCGTGAATATGCTAATATATACAAGGAGGAAGAAGTGGAAAGGTCAGATCGATGGATGTCATTTCTA GAAAGGCAAGCAGAGTCTTCTGAATTTGCCACAGACAGATTAGGTGTTGAGGAAGATGAGACAGTTTTGAGGGCTCAAGCCTTAGAGCACGAAGCTGATG CTGGCACGGAGAAAGCTGTTGATGGAGATGAATTAGGCACCCAGAAGCCTGGTTCTGATACTACAGCTGAAAATGATAGTCCGAAAGAGGAGACTGAAGT TGATAGAGTCCTATTATGGACAGAGATAAGACCATCTCTTCGTACTATCGAGGATATGATGAGCATTCGTGTGAAGAAGAAAACTGCGTCAATGAAAACT ATTGGAAACAAGAAGGGCATGTTAAAGGATGAACAGATTGTTGGAGATGGGAAATCACTATCTCATACTGATGGTGCAAAATCACGAAAGGAAGGGTTTG TGGAAGACTCTGACGATGAGTTCTATGAAGTTGAGAGGTCAGATCCTAGTCCAGATACACCTACAGTTGATGGCACGAGTGCCTCTGCAAATGGTATTTC TGCTGACACTGGAACACTTGAGGCTTCATTTCCTTGGAAAGAAGAGTTGGAAGTTCTTGTTCGTGGAGGAGTGCCAATGGCACTGAGGGGAGAGCTTTGG CAAGCTTTTGTGGGTGTAAAAGCAAGGCGTCGGGAGAAGTATTATCAGAATCTGCTAGCTTCAGAGAATGATTCTGAAAGAAAAATGGATCAGCAAAGCA TGCAGCAGTCAACTGACGATAATGGGAAAACCAATGCAAATCCTGTATTTGTGTCAGAAAAATGGAAAGGGCAGATTGAGAAGGATCTGCCACGAACATT TCCTGGTCACCCTGCTCTGGACCAGGATGGTAGAAATGCTCTGCGGCGATTACTTACTGCATATGCTCGACATAATCCCTCAGTTGGTTATTGCCAGGCC ATGAATTTTTTTGCTGGTTTATTGCTGCTTTTGATGCCTGAAGAAAATGCATTTTGGACCTTGATGGGAATTTTAGATGATTATTTTGATGGTTATTATT CTGAGGAAATGTTAGAATCCCGGGTGGATCAACTTGTTTTCGAGGAGTTGGTGCGGGAGAAGTTTCCCAAACTGGCTAATCATCTTGATTATCTGGGAGT GCAGGTAGCATGGGTAACTGGACCATGGTTCCTTTCCATTTTTGTGAACATGCTTCCTTGGGAAAGTGTTCTTCGAGTGTGGGATGTGCTTCTTTTTGAA GGAAACCGAGTTATGCTATTTAAAACTGCAGTTGCTTTAATGGAGCTATATGGTACTGGGTCCAGCATTGGTAACAACTGCGGATGCTGGAGATGCAATT ACTTCACTTCAGTCATTGGCTGGGTCCACTTTTGATAGCAGTCAGCTTGTATTGATGGCTTGCATGGGTTACCAAAATATAAATGAAATTAGATTGCAAG AGCTTAGGAATAAACATCGGCCAGCTGTAATAGCTGCAGTTGAAGAAAGATCAGAAGTGCTTAAAGCTTGGAGGGATTCTAAGGGCCGGACATCAAAGAA ATTTGGTTTTAAGCATGATCCTAAAATGGGGCAATCTGGGAGTTTATCTCGTGCAGAATCTGGTTCCACTAATAGGGAGGATATTTTGATTAGTCTGACT GGGGAGGGTGGGATAGATTCTGTTCCAGACCTTCAAGAGCAGGTTGTCTGGTTAAAGGATGAACTTTGCAGATTACAAGAGGAGAAAAGATCAGCTCTTC TCAGAGCGGAGGAGCTTGAAACAGCATTAATGGAGATGGTCAAGCAGGATAATAGGCGGCAACTGAGTGCCAAGTGATTTCTGAAGTTGTTCCTATAAGG TAAACATTTTAATTGATATTCTTGAAAAAATGGGTTATGCATACACCGTATCAGCCAAATTGATAACCTGGGAGTGAGATATTACATTACTACACGTTGC AGCATAATAGGAGGCAGTACTCGCGCCTTGATTCAAGCTTGTAGTGTCTTATAGCTGAAGTGTTTTCAAGTTTAAAATTGAAACTGCAAAGAAAAAGGAA AAATTAACTAAAAGATATGAAATCAGACCCTGTTTTCATATAAATCCTTATAAAATTACAGTAAAACGATAAGATAAATAAATGCTTCCTCACACATCTG GAAATGATTTCTCACAATTTGGAAATGCTTTCTGCACGCTGCACTTACCAAACACAGCAATTTTGAGTACCTTAAAACCAGCATAAGTGAAATAAGATAA CTAAATTGCTGCTACACAAACCAACCTATTCTAGCAATCCATCCTTGATGTAGGTTGAGCAGAATTTGGCCTGAAGCTAAAATATGAGCCGTAATTACTC AAGAGTCACGGTTGGGTGTAGAGATAATCAAAGGAGTTTACAAACCTCCAAAATACCAAAATGAAAGGAACTCTTACACAGGCTTGACTATTTCAACTTT TTGTTACGGTTGGGATTCCCC
• Tissue: flowers
• Gene name: LI_gene_68101;
• Additional information: details;

Expression of Ll_transcript_166389

FPKM

• FPAB: 0
• FPNAB: 0
• LF1: 0
• LF2: 0.2
• LF3: 0.3
• LF4: 0.2
• UF1: 0.1
• UF2: 0.1
• UF3: 0.3
• UF4: 0.1

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_166389

• Blastp: TBC1 domain family member 8B from Homo with 36.67% of identity
• Blastx: TBC1 domain family member 8 from Mus with 34.45% of identity
• Eggnog: TBC1 domain family member(COG5210)
• Kegg: Link to kegg annotations (54885)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019441616.1)
• Pfam: Rab-GTPase-TBC domain (PF00566.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;