| Id Trinity | FTRINITY_DN57368_c3_g3_i2 |
|---|---|
| Name Transcript | Ll_transcript_167925 |
| Sequence | AAATATTTGGCACAATATTTTGATTCGACCAACACAGTAAGTGCTACCAGTGCTATAATACCCAGAAGCAAGTAAAAGAAGAAGGCACCAAAGTTAGAAA ATAAAATCATCAACAATGTACAAAACGAAGATTCAACAACTATGCCATAGCAGATTATGGAACTTACCCGATTACCAAACCATAAGAGACGGACCTGACC ATAACCCTCGTTTCATTTCCACCGTCACCCTTAACGGCCTTCAATTTCACTCTCCTGAACCCACCCGAAGCTCCAAAGAGGCCCAAAACAATGCAGCCAA ACTCGCATTTCTTCATTTCACTCAACCCTTTAACCCTAACTCCAACCCAATCCCAAACCCGAACCCGAACCCACCTCTTTCTCTTCCTCACCTTTCTTCC TTTCCCGGTTGTTCTTTTCCTCAACCCTCTCTTTCTATTTCCCCGACTTCAACAACAACATCGACAACCCCTCTCGTTCAGGCGCAATAGTAAGGTTGTT TGTCGGGTGAAACAGTCTGTCTCTTTAAGACAAGACTGCTTACATCTGCTATTTCTCGGACCCCAGTAGGTTCATTTGGTCCCGACAATGGTGGTGTGTT GCGATCGAAGGCGGTAGAAGGACTCCAAACTTCTCAGATTAGTAGCCCTGTTAAAGCTACTACCAGGACAGCAGCGGATCAGAAAAGTGATTTTAATTGC TCTTTTTAGTTTTTTTTGATTAATTTGACAAATAAATGTATATTTTGATTAAGCTATGTTAGACATAACTAGCTGATAAACAACGTGAAAGAAGCTTATA TATGTGTTTGATAAGACCACGGGATAGTTTATAAGCTCGACGACTAGCTCGTCTGACCAAAAATAAGCTAACTTGTGGTGTTTGACAAACAAATTTATTT CAGTGAGTTACTAGCTTATAAGCTCCTATTTGCTAAGCTAATTGAGATAGTTTATGTCTTATATGCAAGGCACTTATTTCGTTTTACACCTAATAACTAG CTTATCAGCGAATCTTACCAAACGGTTTTAATTCAATTGTATAGCTTATCGACTCACAACTTTATACTCCTAGTGTATAAGCCCTTTCAGCTAATTATAA GTAAGTTGTAACAAAAAAGCCTATAAGCTAGCTAGGAAAGAAAACTAAGCTGGTAATCTAATTAATTGAATTGGAACTAGTTTGGTAAGATTAGCTGACA AACTAACTCATACGTGTAAATGAAATAAGTCTCTAATAGCTTATGAAATACAGGCTTATAAGCTAGTAACTTATTAAATAAAACCCCTTGCAAACACAAT AAGTAGTTTATTTTTGGTCAAATAAGCTAGTTGGCTAGATTATAAGCGACCTCATGGAATTACCAAAGATACACCTAGTTTCTCTTTCGCAATTCTAGTA AGGTTCCGTACTACATACCGACCTTCGTTGTTGCCATGCATTTATTTAAAGTATATAAAGGTAAAGTAAGGTTTCCTACTACAGACCAGTATAATAGGTC GAACCCTTTCCTAAACCTTGATTTTTTTCTTGAGAGATTTATAGTGCTTAAGTACCGTTTTTATTTTTTCCCTAGCATAATGCATTGCCATTTTCGGAGG ACATTATAAGCAGAATTGCTCCTAGACATCGGTGGCAAGGTTTTAATGTCTGCAGGGACTATGCTGGGGACATTTGAAGCTAAAAGGGCCTGAATTTTGT TTAGATTTTGTTGTTTTGTTTTTGTTTTTTGGTCTTCTGAACAATTGGCTACTCAGTATATCTATATTTTTTTCTTGATTATTTAGTACCGTGTCTGTAC CGTCTTATATGCCTACAATGCACATCAAACTAATACACTGTAGTAGGTAACTAGTGTGGCCAAACCTAATTGTTTGGAACCATATTAGGTAAGTTTTCAT TGCTTGGAGATTCTGTTTGTACATTTTCCCTTTTTTTTATGGATAATGGAGTAAATATATTGAGATGATGTCAAGATGAATTCCTTTGGTACACTTTAGT AATTTGTAGTCATTGTATTCTGAGTAATGATGAATGAGTGTGATACTATGACTTATGACTTTTAACATTCAAATTTGTCTTAGATATGCAACATTTGTAT AAGAACCAACTACAGAACTATGCTCATAAGAAGAACCTTAATCTGCCGGCTTATTCTTCTGAGTGGGAGGGCCCCCCTCATGCCCTCCGGTTCAAGTGCA AAGTTACCATTGATGGACAAACATTTGAAAGTTCTAAGTTCTTTTCTACATTGAAGGATGCTGAACATGCAGCAGCTGAAGTTGCCTTGATGTCATTATC ACCAGGCGGGGTTCAAGAGGATCAAACTGGGTTATACAAGAATCTATTACAAGAGTTTGCTCAAAAAGAAGGATTTCGTTTACCATCTTATAATACAAAT AGATATGGTGAGTCTCATATGCCAACATTTGTTTCACAAGTGGAGATAGAAGGGGAGAGTTTTACTGGACAAGAAGCCAAATCCAAGAAGCAGGCTGAAA CAAGTGCAGCCAAGGTTGCCTATATGACTTTGAAAGAACGCAAAGCTCATTGTGGACAAGCTCCTGACTTCTCATCTGACTGCTCTGAGGCGAATGTTAT CACTGGTCTGCAACACCACGCCAATCTAAGATCCCCAGTGAGCCCTGGATTAGTCGCCAAAAATCATCTGGACAAAAGTAAAGAACCTGTTGCATTTACA GAAAAGAAAGGATCTTGTTCTTCTTCATCTGGAAATTCAAATGGCTGCACAAAGAATTCTTCCTTGACAAATGCACAATCTGAACCTTCACTATCTGAAA GCAGCAATGTAATTTCTGACACAAGTAAGATGGCTTCATCATGCAGAGTTAAGGTGATTGTTTACTCACGCAATACAAATGTGGAAATTGAAGGTGGTGG CTCCATCATGCCTATTAGTGATGATAAGTGGCTTGCTTACTCATTTTCTCATTGAGGTAAATCACAAGTTGCAGCCTCACTTTTGTCATCATATTTTGGA GTCTTAAATAGAATATCTTTTTAGGGTCATGTGTCAAGTGCCAAAAGGGACAATCAATGGGTGAATGCTTAAGAAGAGTTCAGTATTTGTTGAAAAACTA AAAACATCACGTTTTGAGTACATTAACTTCATCACTTTCCCATAAATACTTTCCCATTTTGACCACCATGCCCTCAAGTATGTTTGCAAAATCATCATTA GCTTACATTTTATTTGACAAAAAATAAGTTAATATGTTTGTTTGGTAAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_68112; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_167925
| Blastp | Double-stranded RNA-binding protein 4 from Arabidopsis with 54.76% of identity |
|---|---|
| Blastx | Double-stranded RNA-binding protein 4 from Arabidopsis with 55.36% of identity |
| Eggnog | Double-stranded RNA binding motif(ENOG410YPSH) |
| Kegg | Link to kegg annotations (AT3G62800) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019427615.1) |
| Pfam | Double-stranded RNA binding motif (PF00035.25) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |