Id Trinity | FTRINITY_DN57376_c1_g1_i7 |
---|---|
Name Transcript | Ll_transcript_166115 |
Sequence | GGAAGCCAGTGCCATTCCTTTTGCTGCACTGACAGCTTGGCGTGCTCTAAAAAGCACTGCCAGAATAAGTGAGGGGTATGTTTCTATTGGGGAGATTGTG ATTTTCATTAGAACATGATGAATTAGTTTTTGCTCTTACATATATATCGTTTTTCTGTACTTCAACAGTTTATCATCCAGTAAATATTCAGTGTGCTGAA AACTCTTTTCTTTCTCTCACTTATATCCTTTAGCTTATCTCAACAGACAAAGGATATTAATAGTGGGTGGTGGAGGAGCAGTAGGGTTTGCTGCAATTCA GCTTGCAGTTGCTGCTGGTTGCAATGTTGCAACTACTTGTGGGAGTCAAAGTATTGATCGAATCCTAGCAGTTGGTGCTGAACAGGCTGTTGATTATGTT GCCGAGGTGGTGATGAATCTTTTTGTATCATATCTGAATTATGAAAGACAATGCTGTTATTGCTTATTGTGTTGATATCAAATTTCATGAAAGGGAAAAT GAACAAAAAATAGCGTACAGGTTTATAGAAAAATAGGAAAACTTAGCATATTGGTTTAAGAAGAGACGATAGCTATCTTTTGATGAATATGGCAAATGAC TGTCTGATACTAGGGAAAGCAAATTGTTAGTGGGAAAATAATTAAAATAACTATGTGAATAAGTTAGAAGTGAGGACATGAGGGAGACTAAGTTGATTTA TTTCTTTTTAAATGTTTAATTGCATTTATAAAACAGCAAAAACAGATCCCTTATCCTAATTGACTTTCTTGCTAAACCCATAAGGGGAATATGGAGATTA AAATATGAACCAATAAGGCCTAAATAACTTAAACCCCAACCTCAAATACAATTTAAGACCGAGACATTTGAACTAGTGGAATACCTCTAGGACGACAATA ACAATAAAAACAAAAGCCTTTCCCTACTTAGTATAGTTAGCTACGAGGATTAAACATCTCTCATAAAGCAAGTCTTGAAAAGGCCATTTATATCCAACTC TAGGTCAAAGTCTTTCTTAATGGTTGCACCTAGAGGATTGTCGGTATTAAAATAGTTTAGCAACTTACTGAAACTTACAATCCTATGTTATAATCACTAT ATGTAGTACAATTAGCTCTAAAATAATAAATAAATAAAAATTCTAAGATAATATGTTCTTTAATCTTATGCTTCATTGATGCTAGTGCATCTTGTATAAG ACTTGCTCTGTCTCTAACTTCATTCTTGAGACAGGATGTTGAGTTGGCTATAAGGGGAAAGTTTGATGCTGTTTTGGACACTATTGGTGTGCCAGAGACA GAACGGATGGGCATTAATTTTCTAAAGCGAGGAGGACACTACATGACCCTTCAGGGTGAGGCAGCATCATTGACTGATAGGTTTGGACTGGCTATTGGAC TTCCTACAGCAACAGCGTTTTTATTGAAAAAACAGATTCAATACCGATACTCTCATGGAATAGAATACTCATGGACATTCATGAGGGCTGACATTGAAGG CTTAATTGAGATTCGAAAGCTATGTGAAGCAGGGAAGTTGAAGATACCTGTCGACAAAACATTTCCCATAGCACAAGTAAAAGAGGCTCATGAGGCAAAA GACAATAAGCTCATTCCTGGTAAAGTAGTGCTGGAACTTGATTGACCAGTTTACTTAAAGTAGAAAATGTTTTTGTTTTGAGATTGTTCCACATTTAAAT GACAAATGGACAGTTTTCCCCCTATGTTTTCACTGTATGATAGAAATGGAACTTTTTGTAAATTGATTCATAATATGCCATCATAAAAATCTATAAATTG GCTTAGAAGTTTGATAACACTGACTTTTATCTTTTTACCCATGCCCACTTGTGAAAGCTGCTTTTATGATAAACCTTTATAACTCCCATGTGTCAATGGC ACTGACATTCAGTAGCCAAACCCATCTTCTGTCTAATTGTGACATGTAGCTGAATGCTTTCAAATTGTATTAACTTTTAGTGATACAATTAGAAAGGTAG GCATCAATTATTCAAATGGTGACTTCTTATGAACATTGTTAGGCTGCATTTGTCTATTTATTTTCCATTTTATGAACTGCTAAGAACACCTTTTATGCTA TTGGTGATTCATAAACATTAGAAAGAAGCCACTAAACTAAAAACTTGCAAGGTCACTTGAATATAACTGGTTCAATTATACATATAGTTTGTTGGGGTGG GGTAATAATATAACATGGGTTGTTATAGCAGTGGCCATCAAACCAGCTAGGACGGGAGAATGGACCACCTGATTAATTGTACTTTGTAGCATGCAAATTG GGGTCCCCTATCACCTCTTCTCATTTTATATTCCACTTCTGAAGATTATGAACTTAATGATTATCATCTTTTCAAAAGTATGAAGTACCTGAAAAAGCCC ACCTTTATGATTATCTCAAAGGCTGCATGCAGATAAGCCCAAATCATCATCCATCATTTAGGATTATCTCTATGCATGGGTAACTTATAATAAATTTTAT ATAGTTATTATATCATATATTATTTATTTGAATTACTTTTTTTTTTGAAGAGTTAATAATGATGAAATATGAATGGTGGATGATAGTGACAGTATATAAA TCCCATACATTGTCGGTGTATATATTTTCCCTCATAAATTATACCATTAATTCATAATATTTGTGTATTATTTTCATTTAAGAGTTAATGATGATGATAA AATATGTGCCTACAGTATAAAAACCTTTGACCTTCAATATATGTAGATCATGTTCTCAACTTTATAAGAAACTAGTTGCCTTCAATATATGTAGATTATT TTCTCAACTTTTATGTAACTCTAGTTGCACTAGTTTGCATGCAATATGTGGCAATTATGTGAGACATGCCGCAGCTGATTTTCGCCACATGTTGCGCAGT TTTCTATGATATTCATGAGCAGCATACTAAGTTGCTAACAATGGCATGTTCTATCTTGCATGCAGATGAAATTATCTTGTTTGATAATGAATAATATTTT AATTAAAAACAATAATAGTTAGTTGAGCATTATTTAAAATTAGTGAAATTTTAATATGCACAAACAAATGAAATTGATAGCTATCAACAAGGCGTTAGTC TAGTGTTATAAGGTTTCGTTAGATCTTTAAAATTAATAGTTTGATTTTTATGAGTGACATTTGTTGGGAGATATAGTTACGACTCTGAAAGAGATTAGTT GTAAAGTCATAAACTTCAAGCTTTGAAATTAAGGATATTTCACTTAGACCATAACTTTCTGAGTACTCG BLAST |
Tissue | flowers |
Gene name | LI_gene_68171; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_166115
Blastp | Reticulon-4-interacting protein 1, mitochondrial from Mus with 31.25% of identity |
---|---|
Blastx | Reticulon-4-interacting protein 1, mitochondrial from Bos with 30.67% of identity |
Eggnog | alcohol dehydrogenase(COG0604) |
Kegg | Link to kegg annotations (170728) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019443914.1) |
Pfam | Zinc-binding dehydrogenase (PF13602.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |