| Id Trinity | FTRINITY_DN57385_c0_g2_i16 |
|---|---|
| Name Transcript | Ll_transcript_166614 |
| Sequence | CTCACTGGATTGGATCTAATGTATGCTCATCATTCAAGTTTTTTGCTCTGCTTCCAATTGTATACTCGTATTCAGTGTTCAATTAGAGTAGCTTCTTCTT TACTCTTTGGTGTGTGCAAATGGCTTCCCTTGCTGATATAGGACTATCGGCGGCAATTAACCTCCTTAGTGCATTTATTTTCTTACTGGCATTTGCCATA CTTCGGATCCAACCTATAAATGATAGGGTGTATTTTCCAAAATGGTATATGAAGGGTTTAAGAAGCAGTCCGTTGCACACAGGGGCGTTCGTGAGCAAGT TTGTCAATATAGATTTCAAGTCATATGTAAGGTTCTTGAATTGGATGCCTGCAGCATTGCAAATGCCAGAACCGGAACTTATTGACCACGCGGGCTTGGA TTCTGCTGTTTACTTGAGAATCTACTTGCTTGGGCTTAAAATATTTGTCCCCATTGCATTCCTGGCATTTTCTGTTATGGTTCCTGTCAATTGGACCAAT AGAACCTTGGAGCGTTCAAATCTGACATATAGTAGCATTGATAAGCTTTCTATGTCAAATATTCCACTCGGGTCCAATCGATTTTGGACCCATTTGGTAA TGGCTTATGCTTTTACTTTCTGGACATGCTATATCTTGAAAAGGGAGTATGAAGTAGTTGCAACAATGAGATTGCATTTTCTTGCATCACAAAGGCGCCG TCCTGACCAATTTACAGTAATTGTGAGGAATGTACCGCCTGATGCTGATGAATCAGTTAGTGAACTTGTGGAACATTTCTTTTTGGTCAACCATCCGGAT CACTATCTTACTCATCAGGTTGTTTACAATGCGAAGAAACTTTCCAGTCTGGTTGCTAAGAAGAAGAAAATGCAGAATTGGCTTGACTACTATCAACTTA AGCATTCTAGAAATCAATCTGCAAGGCCAACTAAAAGGGTACACAGATCTGGTTCATTTGAACTCAAAATTGTCTTCCATTTTGAATTTGGTTTCAGCAT TAGCTTTCTCTTGTCTCTTTTTAAGCCTTTCCATTTCATTATTTTTCTTCCACTATTTTATTCCAGTGGTTAACATTGTACTTGCAGACTGGTTTTTTAG GCCTTTGTGGTAGTAAAGTAGATGCGATGGAATTTTATATTACGGAAATCGACAAACTATCAAAAGATGTAAGCGATGGATTATTCTTTTCTTACCTTCT ATGTTTTTACAATTTCTCCAGTATTGGATGTGTCTTCTTTGTGATTGCATTACATGTAACTTACAACTTTTATACCTTCTATGTTTTTGTTCTTTTTAGC CGATGAAGATCTTCAAAGTTGATGCTGTATTTAATGAAAATTACTTCATACATTGTAACTCTCTTTAAAGGATTACATACCACTTGCTTTAAACATGTTT CTTCAGTTGTTTACATTAAAATTTCAATAACTAACAATGAAATTATTATATTTCCCTCTAGGTTATGCTACTTTAGATATTTGAATAACAAATTCTAAGT ACATGGAGTTGTATTGTTTTCACATACCGATAATATGAAAATCCTTTGTAGAAGCCACCCAGTGAGCATGTTCATCACTATATACACTACTCCAAATTGA TTTTCTGTTAAAATGCTTCTGTTGCATAATTTTGCTGAATACAAATTATTGAATTGTTATTAACATTCAGATAGAATTGGAGAGAGAGAAGGTGGTGCAG AATCCTAAGTCTATAATGCCAGCAGCTTTTGTTTCCTTTAGAACTCGTTGGGGTGCTGCAGTTTGTGCACAAACTCAACAAACTAAAAATCCAACAATAT GGTTAACTGAGTGGGCTCCGGAACCTCGTGATGTGTATTGGGATAACATGGCAATACCATATGTTTCACTCACAATAAGGAGGCTTATAATTTTTGTTGC TTTCTTCTTTCTCACTTTCTTTTTCATGATCCCCATTGCATTTGTTCAATCACTAGCTAACATCGAAGGCATTGAAAAAGCAGCTCCTTTTCTTAAGCCC TTTATTGAAATAAATTTCATAAAATCATTGAAAAAGCAGCTCCTTTTCTTAAGCCCTTTATTGAAATAAATTTCATAAAATCATTGA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_68267; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_166614
| Blastp | CSC1-like protein At1g11960 from Arabidopsis with 75.09% of identity |
|---|---|
| Blastx | CSC1-like protein At3g21620 from Arabidopsis with 73.48% of identity |
| Eggnog | transmembrane protein 63C(COG5594) |
| Kegg | Link to kegg annotations (AT1G11960) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019461627.1) |
| Pfam | Late exocytosis, associated with Golgi transport (PF13967.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |