Ll_transcript_186175

• Id Trinity: FTRINITY_DN57410_c2_g2_i2
• Name Transcript: Ll_transcript_186175
• Sequence: CAAAAACCTCCTTTTCTTGCACTTAGAGCTGATATGGATGCTCTTCCAATGCAGGTTACATGAATTCTATCTATTCTTTCTGTTTGTATATGCTCATATT ACAATTATCGAGAAAAAAAGTTTTTTACATATTGTCAGTGCAATAACATGTAACTTTTTGCCTCTTTTTCTTGGTTTAGATTTTAGAAGCTTTTGTCATA AACTAAGCTTGGTATTGTTGAAATAGTCAAAATAAAGTAGTGTTTTGGTCTGTGTTGTTTTTATGTTAATAATCTCTACATTTTAGGAGTGTGCAGTTTT GTTTTACTGTTTCCACTAGAATACCACGTTTATAGGAATGGAATACGTGGGCAGTTTCCTTTTTCTGTCTCTATGTAAGGCTATATTAGCCTGAAGCTAG TAATGAATAAAGTGTGAAGAACTTTAATATTTTCTGTGTGTTCAATCTTTGTTCTCAGTTAAAGTTTTTCAACAAATTTGGTATCAGAGCTCCTAACAGG GGCCTGATAAAAGAGAGAAAAGAGTTATGGCTACATAAAGCAATTTTGTTCAACCCGCAATTCCTAAATTTGATGGTCATTATGATCATTGGTCGATGCT TATGGAATATTTCCTTAGATCCAAGGAATATTGGGGTTTAGTAGTGAATGGAATACCCACTTTGTCCAGTGAAGGAGAGTTGACTGAGACTCACTGCAAA CTAATTGAGGAGCAGAAACTAAAAGATCTCAAAGTCAAGAATTACTTGTTTCAGGCAATAGACAGGACAGTTTTGGAAACTATCCTTCTCAATGATACAT CAAAGCAGATTTGGGACTCCGTGAAGCAAAAGTACCAGGGATCAACAAGGGTGAAGCGGGCACAGTTGCAAGCATTGAGAAGAGAGTTTGAGATTCTGAA GATGAAGGAAGGAGAGGGAGTAGACGAGTATTTTGCTCGTACTCTAACCATTGCAAATAAGATGAAGATACATGGGCAGAAGATGAACCAAGTGGTTATC ATTCAGAAAATTTTAAGGTCTATGACCTCAAAATTTGACTGTCTTGTTTGTTCAGTGGAAGAATCAAATGATTTGGACACCTTAACCATTGATGAGCTAC AAAGCAGCCTTTTGGTCCATGAGCAAAGAATGACAGGGCATGGAGGTGAGGAACAAGCTCTCAAAATTTCTTATGATGACAGGTTCGGAGGCAGAGGAAG AGGACGTGGAGCACCCAGGGGTCGTGGTAGAGGTAGAGGAAGACAATCATTCAACAAAGCAATTGTGGAGTGTTACAAGTGTCATACACTAGGGCACTTT CAATATGAATGCCCTAGTTGGGAAAAGAATGCAAACTATGTTGAAGTGGAGGAAGAAGATGAGATGTTGATGATGTCTTATGTGGAGTTTCAAGATTCTA GAAGGGAGGATATATGGTTCCTTGATCCAGGGTGTAGTAACCATATGCGTGGGAACAAGAAATTGTTCTCATACCTTGATGAAAGTTTCAGACAATCAGT AAAGCTTGGAAATAATTCTAAGATGGCTGTCACTGGAAAAGGAAGCATAAGACTGGAGGTTAATGGGATTAAACATGTGATTGCAGATGTATTCTACATA CCAGAGTTGAGGAGCAACTTGCTTAGTATTGGGCAACTTCAAGAAAGGGGTCTAACTATCCTAATTCAAGGAGGAATGTGCAAACTGTATCATCCAGAAA GAGGTCTAGTCATGGAGTTAAAAATGTCTACTAATCGGAAATTTATGCTTTTAGCCACAATGCTGCCTAACGACTCTATTTGCTTCCAAACTACTTCAAA AGATGAGTCACATTTATGGCACTGCGGGTATGGTCATATTAATTTCAAAAACTTAAAAGCTTTGCAATGTAAGAAGATGGTGAAGGGATTACCTACACTA CAGATGCCTAGCAAGTTATGCACAGATTGCCTAGTGGGGAAGCAACATCGAGACACCATTCCAAAGACAAGTTCATGGAGGGCCTGCAAAAGACTACAGT TGGTCCACTCTAATATTTGTGGACCAATCAAACCAGACTCGAACTCTAAAAGGAGGTATTTCATTAGTTTCATTGATGATTTCAGCAGAAAAATATGGAT TTATTTTTTGCGTGAGAAATCAGAAGCATTTGGTGTGTTTAAGGATTTTAAGCAGCATGCTGAAAAGGAAATTGGTGATTTCATAAAATGTTTGCGCACA GATAGAGGTGATGAATTTACTTCGGTCGAGTTCAATGATTTCTGTAGGGAGAACGGCATTAAAAGGCAATTGACAACAGCTTATACCCCTCAACAAAATG GGGTAGCTGAGCGAAAGAATCAAACTATAATGAATATGGTTCGAAGTGTGTTGTCTGAAAAAGGGTGCCTAAGGTATTTTGGCCAGAAGCTGTAAATTGG AGTGTGCATGTGTTGAATCAAAGTCCAACCATGGCA
• Tissue: flowers
• Gene name: LI_gene_68460;
• Additional information: details;

Expression of Ll_transcript_186175

FPKM

• FPAB: 0.1
• FPNAB: 0.1
• LF1: 1
• LF2: 0.1
• LF3: 0.3
• LF4: 0.3
• UF1: 0.4
• UF2: 0.6
• UF3: 0.2
• UF4: 0.3

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_186175

• Blastp: Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 30.32% of identity
• Blastx: Retrovirus-related Pol polyprotein from transposon TNT 1-94 from Nicotiana with 29.2% of identity
• Eggnog: -
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_014503329.1)
• Pfam: gag-polypeptide of LTR copia-type (PF14223.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;