| Id Trinity | FTRINITY_DN57415_c1_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_184554 |
| Sequence | TGTGGTTTTGTCAACTCAGTTGTCGCTTCAATCGTTCTATCATCTCTTTCCAAACTTCAGTGGCACAAAGTTTTCAGCGTCACTTTACCGATATGGCTAG TGAAGGTGGAAAGAGTTTTGCTAGAAGAGACCGTTTAAGGGAAATTGAGACCAAAGTTCAAACATGGTGGGAAGAAAAAGATATTTTTCGGTCCGAACCG GGTGATAAACCACCTGAACCGGGAGAAAAGTTCTTTGGGAATTTCCCATTTCCTTATATGAACGGTTATTTGCATCTTGGGCATGCTTTCTCTCTCTCTA AACTTGAATTTGCAGCAGCTTATCATAGATTAAGAGGTGCTAATGTGCTTCTCCCTTTTGCTTTCCATTGCACTGGCATGCCAATCAAAGCCTCGGCTGA TAAACTTGCCAGAGAGATTCAAAAATTCGGCAACCCACCGGTTTTCCCTGGCGAATCGGAAGAACAACCAGAAGAGAAGAATGATGATAATTCAAGTAAT GAGTCTGCTCCTGGTAAATTCAAAGGGAAGAAGTCTAAGGCTGCTGCTAAATCGGGTGGACAGGTTTATCAGTGGGAAATTATGCGTAGTGTTGGTATAT CTGATAGTGATATAGCGAAATTTCAGGATCCTTATGAGTGGCTTAAGTTTTTTCCTCCATTGGCTGTGGAGGACCTTAAGGCTTTCGGGTTAGGATGTGA TTGGAGGAGGTCTTTCATTACAACTGATTTGAACCCGTATTTTGATTCTTTTGTTGGGTGGCAAATGAGAAAATTGAAGTCTTTGGGGAAGGTTGTTAAA GATGTTAGGTATACAATTTTTTCACCATTGGATGGTCAGCCATGTGCTGATCATGATAGAGCGAGTGGTGAAGGAGTTTTGCCGCAAGAGTATACTATTA TAAAGATGGAATTGTTAAAGCCTTTCCCTGAGAAATTTAAGGTTTTGGAGGGAAAGAAGGTGTTCTTGGCTGCTGCGACACTGAGACCTGAGACGATGTA TGGCCAAACCAATGCGTGGGTGTTGCCTGATGGCAAGTATGGAGCCTTTGAAATAAATGAAACTGAGGTGTTTGTGATGGCGCACAGAGCAGCTCTTAAC CTTGCTTACCAGAACCATTCACGAGTCAGTGAGAAACCATCATGTTTGCTTGAAGTCACTGGTCATGACTTGATTGGGCTTCCATTGAAATCACCCCTTT CGTTAAATGAGGTTATTTATGCACTTCCGATGTTGTCCATCTTAATGGATAAAGGTACTGGGGTGGTTACGAGTGTACCTAGTGATGCTCCTGATGATTA CATGGCCTTGCAAGATTTGAAGTCAAAACCAGCATTTAGGGCGAAGTTTGGTGTGAAGGATGAATGGGTTTTGCCGTTTGAGATTCTGCCTATTATTGAT GTTCCACCATTTGGAAATAAGTGTGCGGAAAGGGTTTGCTTGGATATGAAAATCAAAAGTCAGAATGAGAAAGAAAAGCTTGCAGAGGCTAAGAGGCAAA CATATTTGAAGGGATTCAATGACGGAACAATGATTGTTGGGGAATATGCAGGGAGGAAAGTTCAGGAAGCTAAACCCTTGGTTAGGAGCAAGCTTTTGGA AACAGGCCAGCAACTTCTCCTACACTATTTTATAATTCTTTTTATTCTTGTATATATCACAATTTATATCATTTTGATCCCACTGCCTGCCTAATAATTG TGTTGGAGGTTAATTTCTTTTACTATTACAATTTACAACAACAATCAAGCCTTAATCCCAGTAGGTGGGGTAGGTAGATTAAACGCCGTAGCCGGGAATT TTATTACACTTATTGCCAACATATGATTAGATTTTAATATAAATAGAGATTTAAGTATGCCATATATACAGAGATAGTTTTGCATCAACAATTAACCAGA ATTAAACTCGTTATAAAATATTGTAATTTATCTTAGAAATGTAGATATTTAAGAAAAGTTTACCGTTATGACTGTATTGTCCTTATTCACTTCCCCCCAC CAGTTAAATTTTATAGTTCCGCTGTTGCAGGTCAGGCTATTGTTTACAGCGAGCCAGAGAAGCGGGTAATGTCAAGATCTGGCGATGAGTGTGTTGTAGC TCTTACAGATCAGTGGTACATTACATATGGAGAATCAGAATGGAGGAAGTTAGCTGAGGAGTGCTTGTCTAGCATGAGCTTGTATTCTGATGAGACACGA CATGGATTTGAGCATACTTTGAGCTGGTTAAATCAATGGGCCTGCTCACGATCCTTTGGTCTTGGGACTCGCATCCCATGGGATGAGCAATTTCTAGTTG AGTCTCTATCGGATTCTACTATTTACATGGCTTATTACACCATTGCACATCATTTACAGAACGGAGACATGTATGGACGCCAGGAGTCTGCGATTAAACC TCAACAATTGACTGATGAAGTGTGGGACTATATTTTCTGTGGTGGACCATACCCTACTTCAACTGATATCTCATCATCGATTTTAGAGAAAATGAAGCAG GAGTTTGAGTATTGGTATCCATTCGACCTTCGAGTTTCTGGTAAGGATCTCATCCAAAACCATCTTACCTTCTCCATTTACAACCATACTGCAATTATGC CCAAGCATCACTGGCCTCATGGGTTTAGATGCAATGGCCACATAATGCTCAATTCTGAGAAGATGTCCAAGTCTACCGGAAATTTCAGGACATTGCGTCA GGCAATTGAGGAGTTTTCTGCTGATGCTACACGGTTCTCTTTGGCTGATGCTGGTGATGGTGTTGATGATGCAAATTTTGTCTTTGAGACGGCGAATGCT GCAATTCTTCGGCTCACCAAAGAGATTGCATGGTATGAAGAGATTCTGTCTGCAGAATCTTCAATGAGAACAGGGCCCCCATCTACATATGCTGATCGTG TGTTTGCCAATGAGATTAACATTGCTGTCAAAACAACTGAGCAAAATTACTCCAACTACCTCTTTCGTGAAGCTCTTAAAACTGGTTTTTATGATCTTCA GGCGGCTAGGGATGAGTATAGATTCTCATGTGGAGTTGGAGGTTACAATCATGACTTAGTGTGGCGTTTTATGGATGTGCAGACACGTCTTCTAGCACCT ATCTGTCCGCACTATGCAGAATTTATTTGGAGAGATCTTTTGAAGAAGGATGGTTTTGTGGTGAGTGCAGGCTGGCCTACAGCCGATTCTCCTGATCTTA CATTGAAGAGTGCTAATAAATATCTGCAGGAGTCTATTGTTTTGATGAGAAAGTTGCTACAGAAGCAACTTTCTGGCTCAAAGAAAGGAAATAAAAAAGG TGCTCCAGTTCCATCAGTGAAGGTAACAAAAGGCTTGATTTATGTAAATGAACAGTTTGATGGTTGGAAAGCCGAATGCCTGAATATTCTCCAGAGCAAA TTTGACAAGGAAACTCGAACATTTGCTCCGGACTCGGAGATCGTGGAGGCTATAGAGAAGAACAGTTCTATAGGCAAAAATCCCTTCAGGCCTTTCTTGA AGTTTAGGAAGGATGAAGCTATTAAACTTGGGGCTGAAGCCCTGGATTTGAAATTGCCTTTTGGTGAAATTGATGTTCTTGCGGAAAACTTGGACTTGAT CAAAAGACAACTAGGTCTAGATGATGTAGAAATCTTGTCTGCGGCCGATGCTGATTCCTTGGCTAGAGCTGGACCCTTAGCTTCTCTTCTAAATCAGAAT CCTCCTTCCCCTGGACACCCTACTGCCATCTTTTTAACTCAGTAGCTGCTGGGTGAGATTCTACAAGACCCCGTTTCTTGAACTAGGTTAAAGCTTTTCT TGTATAATGTTTATTTATATGTAAACATGATTGTCAGGATGAGTAACTGAATAACTGAACGAAGCTTTTCTTCTTTATCTAATTTGAGGGTTAACATTTC CATATTTTGTCTTATTTTTTGTTTCCGGTAAATTTAAGTGGCCCATTCATTCAGATCTCAGCCCTTTTCCCAGTAGCTGATTTCTTAGCTCTGGAATTTG GATGCATGTTATGACTACTCTAGGCACTAGAAAAAAGTTATGAAGGAAATTGTTATTCTATTGTTGCACTGATTTTGCTATAGCTGCCTATTTGAAGAAC ATTAATTGAGATATAAAATTTATGCTTAACATTGTTTAGATCCATTATCAAGTTTTATTTTAGCATCATTTGGTTATAACTAGAACATTCAT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_68497; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_184554
| Blastp | Leucine--tRNA ligase, cytoplasmic from Arabidopsis with 72.99% of identity |
|---|---|
| Blastx | Leucine--tRNA ligase, cytoplasmic from Arabidopsis with 72.54% of identity |
| Eggnog | Leucyl-trna synthetase(COG0495) |
| Kegg | Link to kegg annotations (AT1G09620) |
| CantataDB | Link to cantataDB annotations (CNT0002196) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019421671.1) |
| Pfam | tRNA synthetases class I (I, L, M and V) (PF00133.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |