| Id Trinity | FTRINITY_DN57415_c1_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_184557 |
| Sequence | GGGTAATGCAAAACCCTGTTCCGCATTTGCGAATTGCTATCAGCTCGTTTCCTCTGTATGTGGTTTTGCCAACTCCGTTCTCGCCTCCCATTTCAAACTT CACTGTCACACAGGTAAACATGCCTCATCTTAATTTCAACGTTTCAATATCTATTTTCAACACTAACTTTTCTTATATAAATTTCACACTTCACTAATCA CTGTCATTTCAGATCTGAAAACAAATTATTTTATTTTATCTCTTTCTATAGATTCCATCGTTACTTCACCGATATGGCGAGTGAAGGAGGAAATAGTTTT GCGAGAAGAGATCGTCTAAGAGAAATTGAGGCTAAGGTTCAAATATGGTGGGAAGAAAGTGATATTTTCCGGTCTGAACCGGGTGATAAACCACCTGAAC CGGGTGAGAAGTTTTTTGGGAACTTCCCTTTTCCTTACATGAACGGTTACCTGCATCTTGGACATGCTTTTTCGCTCTCGAAACTTGAATTTGCCGCGGC TTTTCATAGACTCAGAGGCGCCAATGTGCTCCTTCCTTTCGCTTTTCATTGCACTGGCATGCCGATTAAAGCGTCGGCTGATAAACTTGCAAGAGAGATT CAACTATTCGGTAACCCACCGGTTTTCCCAGGCCAATCGGAAGTAGTAGTAGAAGAAAAGAATGACGATAATTCGCAGAATGAGACTGCTCCTGATAAAT TCAAGGGGAAGAAATCTAAGGCTGCTGCTAAATCAGGTGGTCAAGTTTACCAATGGGAAATTATGCGTAGTGTTGGTATATCTGATAGTGATATAGCGAA ATTTCAGGATCCTTATGAGTGGCTTAAGTTTTTTCCTCCATTGGCCGCGGAGGACCTTAAGGCTTTTGGGTTAGGTTGTGATTGGAGAAGGTCATTCATT ACAACTGATTTGAACCCATATTATGACTCTTTTGTTAGGTGGCAAGTGAGGAAATTGAAGTCTTTGGGGAAGGTTGTTAAAGATGTTAGGTATACGATTT TTTCACCATTAGATGGTCAGCCATGTGCCGATCACGATAGAGCCAGCGGTGAAGGGGTTTTGCCACAAGAGTACACTATTATCAAGATGGAATTGTTAAA GCCTTTCCCTGAGAAATTTAAGGTTTTGGAGGGAAAGAAGGTTTTTTTGGCCGCTGCAACTTTGAGACCTGAGACTATGTATGGCCAAACCAATGCATGG GTGCTGCCTGATGGCAAGTATGGAGCCTTTGAAATAAATGAAAATGAGGTGTTCTTTATGGCGCATAGAGCAGCTCTTAACCTTGCTTACCAGAACCATT CACGAGTCCCTGAGAAACCATCATGTTTGCTTGAAGTCACTGGTCATGACTTGATTGGGCTTCCGTTGAAATCACCTCTTGCATTTTACGAGGTTATTTA TGCACTTCCTATGTTGTCCATCTTAATGGACAAAGGTACTGGGGTGGTTACCAGTGTACCTAGTGATGCCCCTGATGATTACATGGCCTTGCACGATTTG AAGTCAAAACCAGCATTTAGAGAGAAGTTTGGTGTTAAGGATGAATGGATTTTACCGTTTGAGATTGTGCCTATTATTGATGTTCCACCCTTTGGAAATA AGTGTGCTGAACGGGTTTGCTTGGATATGAAAATCAAAAGTCAGAATGAGAAAGAAAAGCTTGCAGAGGCCAAGAAGCAAACATATTTAAAGGGATTCAA TGAAGGAACAATGATAGTTGGGGAATATGCCGGAAAGAAAGTTCAGGAAGTTAAACCCGTCATTAGGAGCCAGCTTTTGGAAACAGGTCAGGCTATTGTT TATAGTGAGCCAGAAAAGCGAGTAATGTCAAGATCTGGTGATGAATGTGTTGTAGCTCTAACTGATCAGTGGTACATTACATATGGGGAACCAGAATGGA GGAAGTTAGCTGAGGAGTGCCTGTCTAACATGAGCCTGTATTCTGATGAGACACGACATGGATTTGAGCATACTTTGAGCTGGTTGAACCAGTGGGCCTG CTCACGGTCTTTTGGTCTTGGGACTCGCATCCCATGGGATGATCAGTTCCTTGTTGAGTCTTTATCAGATTCCACTATTTACATGGCTTATTACACCATT GCACATCATTTACAGAACGGAGACATGTATGGACAGCATGAGTCTGCCATTAAACCTCAACAATTGACTGATGAGGTCTGGGACTATATTTTCTGTGGTG GACAATACCCTGAGTCAACTGATATCTCGTCATCTATTTTAGACAGAATGAAGCGGGAGTTTGAGTACTGGTATCCATTCGACCTTCGAGTTTCTGGTAA GGATCTCATCCAAAACCATCTTACCTTCTCCATTTACAACCATACTGCTATTTGGTCGAAGCAATACTGGCCTCGTGGGTTTAGATGCAATGGCCACATA ATGCTCAATTCTGAGAAGATGTCCAAGTCAACTGGAAATTTCAGGACATTGCGTCAGGCAATTGAGGAGTTTTCTGCTGATGCTACGCGGTTTTCTTTGG CTGATGCTGGTGATGGTGTTGATGATGCAAATTTTGTCTTTGAGACGGCAAATGCCGCAATTCTTCGGCTCACCAAAGAGATCGCATGGTATGAAGAGAT TCTGGCTGCAGAAACTTCTATGAGAACTGGTCCCCCATCTACATATGCTGATCGTGTGTTTGCCAATGAGATTAACATTGCTGTCAAAACAACTGAGCAA AATTACTCCAACTACATGTTTCGTGAAGCTCTTAAAACTGGCTTTTATGATCTTCAGACAGCTAGGGATGAGTATAGATTCTCGTGTGGAGTTGGAGGTT ACAATCGTGACTTAGTATGGCGTTTTATGGATGTGCAGACACGTCTTCTAGCACCTATCTGTCCGCACTATGCAGAATTTATCTGGAGAGAGCTTTTAGT GAAGGAAGGTTTTGTGGTGAATGCAGGCTGGCCCACAGCTGATTCTCCTGATCTTACATTGAAGAGTGCTAATAAATATCTGCAGGAGTCTATTGTTTTG ATGAGAAAGTTGCTACAGAAGCAACTTTCTGGCTCAAAGAAAGGTAATAAGAAAGGTGCTCCAGTTCCATCAGTGAAGGTAACAACAGGCTTGATATATG TAAATGAACAGTTTGATGGTTGGAAAGCCGAATGCCTCAATATTCTCCGTAGCAAATTTGACGAAGAAACCCGAACTTTTGCTCCAGACAAAGAGATCGT GGAGGCTGTCGAGAAAAGTTCTATAGGCAAAAATCCCTACAGGCCTTTCCTGAGGTATAGGAAGGATGAAGCAATTAAACTTGGGGCTCAAGCCCTGGAT TTGAAATTGCCATTTGGTGAAATTGATGTCCTTCAAGAAAACTTGGACCTGATCAAGAGACAACTAGGTCTAGAAGATGTGGAAATCTTGTCTGCAGCAA ATGCTGATTCTTTGGCTAGAGCTGGACCTTTAGCTTCTCTTTTAAATCAAAATCCTCCTTCCCCTGGACATCCAACTGCCATATTTTTAACTCAGTAGCT GCTTGGTTGCAAGTGTGCTCTATCCGGAATATGTAGCGTGATTATCTTGATATGGCAATCCTGCTTTGCTGGTGATTGGGTGAGGTTGAATTTTTCAGGT TGGTGTAGTTTGTTGGAAACTGCTGATGTAAAATTAAGATTTGTTAACATCTTACTTCATGATAGAATTCTCGGTTTTTTATTTATTTGCCACTAGTTTC CTTTATTATTGGCTCTAGAACTTCATGGCCTAGCTTTTCTGTTTGCTGAATATCGAGACATTTTTATTTTTGTTGTCAAGTGTTCTTATAGTGGCATGTT ATGTTGAGAAAACTGTCGTTGAATCATAATTAAATTTTGATTAAATTATAATTGTTTTCATGAGTTTATTTG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_68497; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_184557
| Blastp | Leucine--tRNA ligase, cytoplasmic from Arabidopsis with 71.52% of identity |
|---|---|
| Blastx | Leucine--tRNA ligase, cytoplasmic from Arabidopsis with 71.52% of identity |
| Eggnog | Leucyl-trna synthetase(COG0495) |
| Kegg | Link to kegg annotations (AT1G09620) |
| CantataDB | Link to cantataDB annotations (CNT0002196) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019423387.1) |
| Pfam | tRNA synthetases class I (I, L, M and V) (PF00133.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |