Id Trinity | FTRINITY_DN57415_c1_g1_i4 |
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Name Transcript | Ll_transcript_184558 |
Sequence | TGTGGTTTTGTCAACTCAGTTGTCGCTTCAATCGTTCTATCATCTCTTTCCAAACTTCAGTGGCACAAAGTTTTCAGCGTCACTTTACCGATATGGCTAG TGAAGGTGGAAAGAGTTTTGCTAGAAGAGACCGTTTAAGGGAAATTGAGACCAAAGTTCAAACATGGTGGGAAGAAAAAGATATTTTTCGGTCCGAACCG GGTGATAAACCACCTGAACCGGGAGAAAAGTTCTTTGGGAATTTCCCATTTCCTTATATGAACGGTTATTTGCATCTTGGGCATGCTTTCTCTCTCTCTA AACTTGAATTTGCAGCAGCTTATCATAGATTAAGAGGTGCTAATGTGCTTCTCCCTTTTGCTTTCCATTGCACTGGCATGCCAATCAAAGCCTCGGCTGA TAAACTTGCCAGAGAGATTCAAAAATTCGGCAACCCACCGGTTTTCCCTGGCGAATCGGAAGAACAACCAGAAGAGAAGAATGATGATAATTCAAGTAAT GAGTCTGCTCCTGGTAAATTCAAAGGGAAGAAGTCTAAGGCTGCTGCTAAATCGGGTGGACAGGTTTATCAGTGGGAAATTATGCGTAGTGTTGGTATAT CTGATAGTGATATAGCGAAATTTCAGGATCCTTATGAGTGGCTTAAGTTTTTTCCTCCATTGGCTGTGGAGGACCTTAAGGCTTTCGGGTTAGGATGTGA TTGGAGGAGGTCTTTCATTACAACTGATTTGAACCCGTATTTTGATTCTTTTGTTGGGTGGCAAATGAGAAAATTGAAGTCTTTGGGGAAGGTTGTTAAA GATGTTAGGTATACAATTTTTTCACCATTGGATGGTCAGCCATGTGCTGATCATGATAGAGCGAGTGGTGAAGGAGTTTTGCCGCAAGAGTATACTATTA TAAAGATGGAATTGTTAAAGCCTTTCCCTGAGAAATTTAAGGTTTTGGAGGGAAAGAAGGTGTTCTTGGCTGCTGCGACACTGAGACCTGAGACGATGTA TGGCCAAACCAATGCGTGGGTGTTGCCTGATGGCAAGTATGGAGCCTTTGAAATAAATGAAACTGAGGTGTTTGTGATGGCGCACAGAGCAGCTCTTAAC CTTGCTTACCAGAACCATTCACGAGTCAGTGAGAAACCATCATGTTTGCTTGAAGTCACTGGTCATGACTTGATTGGGCTTCCATTGAAATCACCCCTTT CGTTAAATGAGGTTATTTATGCACTTCCGATGTTGTCCATCTTAATGGATAAAGGTACTGGGGTGGTTACGAGTGTACCTAGTGATGCTCCTGATGATTA CATGGCCTTGCAAGATTTGAAGTCAAAACCAGCATTTAGGGCGAAGTTTGGTGTGAAGGATGAATGGGTTTTGCCGTTTGAGATTCTGCCTATTATTGAT GTTCCACCATTTGGAAATAAGTGTGCGGAAAGGGTTTGCTTGGATATGAAAATCAAAAGTCAGAATGAGAAAGAAAAGCTTGCAGAGGCCAAGAAGCAAA CATATTTAAAGGGATTCAATGAAGGAACAATGATAGTTGGGGAATATGCCGGAAAGAAAGTTCAGGAAGTTAAACCCGTCATTAGGAGCCAGCTTTTGGA AACAGGTCAGGCTATTGTTTATAGTGAGCCAGAAAAGCGAGTAATGTCAAGATCTGGTGATGAATGTGTTGTAGCTCTAACTGATCAGTGGTACATTACA TATGGGGAACCAGAATGGAGGAAGTTAGCTGAGGAGTGCCTGTCTAACATGAGCCTGTATTCTGATGAGACACGACATGGATTTGAGCATACTTTGAGCT GGTTGAACCAGTGGGCCTGCTCACGGTCTTTTGGTCTTGGGACTCGCATCCCATGGGATGATCAGTTCCTTGTTGAGTCTTTATCAGATTCCACTATTTA CATGGCTTATTACACCATTGCACATCATTTACAGAACGGAGACATGTATGGACAGCATGAGTCTGCCATTAAACCTCAACAATTGACTGATGAGGTCTGG GACTATATTTTCTGTGGTGGACAATACCCTGAGTCAACTGATATCTCGTCATCTATTTTAGACAGAATGAAGCGGGAGTTTGAGTACTGGTATCCATTCG ACCTTCGAGTTTCTGGTAAGGATCTCATCCAAAACCATCTTACCTTCTCCATTTACAACCATACTGCTATTTGGTCGAAGCAATACTGGCCTCGTGGGTT TAGATGCAATGGCCACATAATGCTCAATTCTGAGAAGATGTCCAAGTCAACTGGAAATTTCAGGACATTGCGTCAGGCAATTGAGGAGTTTTCTGCTGAT GCTACGCGGTTTTCTTTGGCTGATGCTGGTGATGGTGTTGATGATGCAAATTTTGTCTTTGAGACGGCAAATGCCGCAATTCTTCGGCTCACCAAAGAGA TCGCATGGTATGAAGAGATTCTGGCTGCAGAAACTTCTATGAGAACTGGTCCCCCATCTACATATGCTGATCGTGTGTTTGCCAATGAGATTAACATTGC TGTCAAAACAACTGAGCAAAATTACTCCAACTACATGTTTCGTGAAGCTCTTAAAACTGGCTTTTATGATCTTCAGACAGCTAGGGATGAGTATAGATTC TCGTGTGGAGTTGGAGGTTACAATCGTGACTTAGTATGGCGTTTTATGGATGTGCAGACACGTCTTCTAGCACCTATCTGTCCGCACTATGCAGAATTTA TCTGGAGAGAGCTTTTAGTGAAGGAAGGTTTTGTGGTGAATGCAGGCTGGCCCACAGCTGATTCTCCTGATCTTACATTGAAGAGTGCTAATAAATATCT GCAGGAGTCTATTGTTTTGATGAGAAAGTTGCTACAGAAGCAACTTTCTGGCTCAAAGAAAGGTAATAAGAAAGGTGCTCCAGTTCCATCAGTGAAGGTA ACAACAGGCTTGATATATGTAAATGAACAGTTTGATGGTTGGAAAGCCGAATGCCTCAATATTCTCCGTAGCAAATTTGACGAAGAAACCCGAACTTTTG CTCCAGACAAAGAGATCGTGGAGGCTGTCGAGAAAAGTTCTATAGGCAAAAATCCCTACAGGCCTTTCCTGAGGTATAGGAAGGATGAAGCAATTAAACT TGGGGCTCAAGCCCTGGATTTGAAATTGCCATTTGGTGAAATTGATGTCCTTCAAGAAAACTTGGACCTGATCAAGAGACAACTAGGTCTAGAAGATGTG GAAATCTTGTCTGCAGCAAATGCTGATTCTTTGGCTAGAGCTGGACCTTTAGCTTCTCTTTTAAATCAAAATCCTCCTTCCCCTGGACATCCAACTGCCA TATTTTTAACTCAGTAGCTGCTTGGTTGCAAGTGTGCTCTATCCGGAATATGTAGCGTGATTATCTTGATATGGCAATCCTGCTTTGCTGGTGATTGGGT GAGGTTGAATTTTTCAGGTTGGTGTAGTTTGTTGGAAACTGCTGATGTAAAATTAAGATTTGTTAACATCTTACTTCATGATAGAATTCTCGGTTTTTTA TTTATTTGCCACTAGTTTCCTTTATTATTGGCTCTAGAACTTCATGGCCTAGCTTTTCTGTTTGCTGAATATCGAGACATTTTTATTTTTGTTGTCAAGT GTTCTTATAGTGGCATGTTATGTTGAGAAAACTGTCGTTGAATCATAATTAAATTTTGATTAAATTATAATTGTTTTCATGAGTTTATTTG BLAST |
Tissue | flowers |
Gene name | LI_gene_68497; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_184558
Blastp | Leucine--tRNA ligase, cytoplasmic from Arabidopsis with 72.17% of identity |
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Blastx | Leucine--tRNA ligase, cytoplasmic from Arabidopsis with 72.07% of identity |
Eggnog | Leucyl-trna synthetase(COG0495) |
Kegg | Link to kegg annotations (AT1G09620) |
CantataDB | Link to cantataDB annotations (CNT0002196) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019423387.1) |
Pfam | tRNA synthetases class I (I, L, M and V) (PF00133.21) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |