Id Trinity | FTRINITY_DN57423_c0_g1_i12 |
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Name Transcript | Ll_transcript_183704 |
Sequence | GAAACCCTAACTCTATGATAATGAAACCAAAACAAAACTCTCACTGAAATTCGTGAAAATGTTCCTTTTTATTCTGCATCAGATCCACACTCTTTTTAAC TCATACTCAACCTTTTCTACTCTAGGGTTTTCTTTTACCTTCTGCAACTTTTTTTATCTTCTGTTCTTTCTGTTTTGTTGTTGTTTTGGTTTCAGAGCTG AATTATGCTATGTGGGTTTATAAAAAGATCTATTTTTTGTGTCAACTGCTTTGTTTTTTAGTAACTGTGTTTGGAGAGTGTTGGATTTGTTGCTCTGATT CATGTATGCTTATGTTTTAGCTTTAATTGTAATCTAATCGTGATGATTATGTTTTTAGTTATGGTGCTAATTTTCTACAATGATCAGAGTGTTCCTTTGT TTTTGTACTAATGTTGTTTCATTAATCAATTTGTTGCAGGGTTGGAGAAATCTGAGGAGGAAGGTGATTTGGATTACAATTGAGAATAATTAAAAGACTT ATTGCTGGTGGTACGGTATTAAAGAGCAAATGGATGCAGAGGCATCAAGCACTACTAACCACCTGCCTGGCTTTCTTCACCGGTCACTTCCTGCTGTTGT ACCCACACTTTTGATTTCAATAGGATATGTTGACCCTGGAAAGTGGGCAACAATGGTTGAAGGTGGTGCACGGTTTGGGTTTGGTTTGATGCCTTTCATG CTTATTTTCAACTTTGCCGCGATCTTTTGTCAGTACATATCTGCAAGGATTGGTATAATCACAGGAAAAGATCTTGCTCAGATTTGCAGCGATGAATATG ATACATGGACATGCATGCTCCTTGGAATTCAAGCAGAAATTTCTATGATTATGCTAGATCTTAACATGATCTTGGGCATAGCACAAGGATTAAATCTTAT TTTTGGGTGGGACTTGTTCGCTTGTGTCTTTTTAACTGCTATTGGTGCTGTTTTTCATCTGCTTCTTGCTCTCCTCCTTGACATTAAGAAGGCAAAGATC CTAGGCCTGTATGTGACAGGCTTTGTATTGCTTTCTTTTGTACTTGGAGTACTTATCAATCAACCAGGAATTTCGTTATCCATGAATGGAGTACTAACAA AGTTGAATGGGGAGAGTGCATTTGTGCTGATGAGTCTTCTTGGAGCAACTCTTGTGCCTCATAACCTATACCTTCATTCCTCTGTTGTACAGTGGCATCA GGGACCAACTGATATTTCTAAGGAAGCCTTGTGTCATAACCATTTTTTGGCCATCTTATGCTTCTTCAGTGGTCTTTATTTGGTCAATAATGTGGTGATG AATGCCTCAGCAAATGAGTTCTATAGTACGGGTCTTGTTTTGCTTACTTTTCAGGACGCATTATCACCAATGGAACAGGTGTTGCGTAGCCCGATAGCTT TGTTTGCTTTTTTATTGATTCTGTTTCTTGCAAATCAAGCCATAGCATTAACTTGGAGTTTAGGTGGAGAAGTAGTTGTCCATGGTTTCTTAAGATTGGA TATTCCAGGCTGGCTTCATTATGCTACAATTAGAGTGATTGCCGTTCTGCCTGCCCTTTATTGTGTTTGGAGTTCTGGAGCTGAAGGGATTTATCAGCTA GTTATAGTCACTCAGGTTTTGGTAGCTCTGCAACTTCCATCTTCTGTGATTCCCCTTTTTCGAGTTGCTACATCTAGGTCAATAATGGGTGTACACAAGA TCTCCCAGTCTGTGGAACTTTTGGCCTTGGTCATATTTATCGGGGTGCTTGGCTTGAATATTGTCTTTGTGGTAGAAATGGTATTTGGCAGTAGTGAATG GGTGGGTGATTTGAGATGGAATGCAGGGAATGGTGTATCTTCCTCATATATAATTCTTTATACTTCTGCCGTTGCATCAATATGTTTCATGCTTTGGTTA GCTGTCACACCTTTAAGATCTGCCAGTGTTCAGTTAGAAGCTCAGGCGTGGAACTGGGATACGCCCGAGACTGTATCAAATCTGCCAGTTGATGGTGAGG AGTCATATTTAACTGGAACAAGGCATCAACGAGTTATGTCGGTTCAGGTGAAGGAACCAGCACCAGCACCAGCACCAGCACCAGCACCAGCACCAGCTCT GACTCTAGCAAGGACCTTGGAGTACTCAGATGTAACAGTTCCAAGTTCTCGTCACGATATACCAGAAACTAAAATGGAGCCTGATCTACATGTGAATGAT GAAAAGGAGACTCAATCTACTACATCATTTCCTAGTTCCCCTAAATCTCGTGATAAGGTGTCAGCTTCCACATCAGAGTCAGAGGCAGTATCAACTGTAG TTGATGAAGTTTCTGTTTCTAGATCTGAAGACACCAAATGTGTAAAAATAGAAACAAGTGCCCCCATTGGGAAGAGTGTGGAGTTTATGGGAGATTCAAA TGCTGAGAGGGATGATGATGATGATGTTGACTCATGGGAAACTGAAGAATCGTCCAAAGTGGTCTCAACAAGTGCCCTGTCTTCAACATCAGATGGCCCT GCATCATTCAGGAGTCTTGGTAGGAAAAATGATGAAGGTGGGAATAGCATTGGAAGTCTTTCGAGGTTAGCAGGCTTAGGGCGTGCAGCAAGGCGTCAGC TAGCTGCTGTTCTTGATGAATTCTGGGGACAACTTTATGATTTCCATGGGCAACCAACCCGGGAAGCAAAGGCTAAGAAACTTGATGCTTTGCTGGGAGG GGGAATTGATTCAAGATCCACTGGTTCATTGCAGCAGGTGGATGCATGTGGAAAGGAATATTCTGAATACTTAGCATCTGTTGGAGGTAGAGCTTCTGAC ACTTCAATGAATTCCGGTCTATATGACTCTTTAAAGCAGCCTAGGATGCAAAGTAGTTTAGAGTCTTCATATGGCCTTCAAAGGAGTTCGCCCTCAATTC AGGCCCAGTTATTAGATGCATATGTGCAGTCACAGAACTCCAACCGCAATCTCCTCGATTCTGGTGAGAGGCGCTATTCTAGTGTGCGCAATCTGCCTTC ATCCGAGGCTTGGGATTATCAGCCAGCTACCATTCATGGTTATCAGTCTGCATCCTATCTTAACCGGGTTAGTAAAGACAGAAACTTTGACAACTTGAAT GTTTCCATGGAGTTATCATCACTGAAATCCCCTTCCACGGATACAAATTACAGAGGTTCACTTGCATTTGCTTTGGGGAGAAAGTTGCATAATGGTGCAG GTATAGGCCAACCCCCTGGGTTCCAACACGTAGCTGTCTCTAGAAATTCGCAGTTGCAATCTGAGAGGTCCTATTATGATATTGGCTCATCAGTATCTGC AGATAATGCAGTCAGTTGCATTAATAACAAGAAGTACCACAGCTTACCAGACATTTCGGGATATGCCATCCCCCGCAGGACTGGTTATGTATCTGAGAAA AATTCTCCATGGAATGGGTCTGTTGGATATGGATCTTCTGTAAGTAAAACATATGAACCATCATCATATTCAAATTCTGGATCAAGAATAGGACATCCTT TGGCCTTTGATGAACTCTCTCCATCAAAAGTTTACCAGGAGGCACTCTCTTCACAGTTGAGTTCTGGTTTTGATACTGGATCTCTATGGTGTAGACAACC TTTTGAGCAGTTCGGTGTTGCTGAAAAATTTGATAATGTTGCAATGGACGGTGCTGGAATTAGGCCTAATGCTGCTGCTCAAGAAACTACTTCTTTTGTA GATATAGAGGCGAAACTTCTTCAGTCGTTTAGACTTTGCATTGTGAAGCTCTTAAAACTTGAAGGATCTGATTGGTTATTCAGACAAAACGATGGAATTG ATGAGGATCTGGTCGATCGCGTGGCAGCAAGGGAGAAATTTCTTTATGAAGTTGAAACTAGGGAGATGAATCAGGTCGCTCATATGGGTGAAACTCAATA TTTTTCTTCTGATGGGAAACCTGGTTCTTCAATAAGGAATGATGATGCTAATTCCTCTAGTTTTTCAGTTTCCTCAGTTACTAATTGTGGGGAGGGGTGT ATTTGGAGATCAGACTTAATAATAAGCTTTGGAGTGTGGAGTATCCACCGTATTCTTGACCTCTCACTTATGGAAAGCCGGCCAGAACTTTGGGGGAAAT ACACCTATGTGCTCAATCGTCTCCAGGGCATCATTGATCCAGCTTTTTCCAAGCCTCGTAGTCCCATGGTCCCATGCTTTTGCCTTCAAGTTCCCGCGTC ACATCAGCAAAAGTCAAGCCCCTCTCAGTCCAACGGAATGCTGCCGCCTACTTCAAAACCAGGCCGAGGAAAATACACAACCGCATCGACGTTGCTTGAT GTGGTCAAGGATGTGGAGATTGCAATCTCTACCCGGAAAGGACGTAGTGGAACCGCAGCAGGTGATGTTGCTTTCCCAAAGGGAAAAGAAAATTTGGCAT CGGTTCTCAAACGATATAAGCGGAGGTTATCGTACAAACCCGCCGGAATTCATTAAAGGACTGATTCACTCTTGGCCGTGTCAGCGCCATACAACTTGTT GCATTTTGCATTAACAAAATGACTGTTCCTTGGTCTGCTTTATATCGTGATGCAGTTCATGACCTTGTATCAAATTCCATGTAGCAGATTTTATCCTTGT ATGTTACATACACACATGGCAAGAATTATTGTGTAATTGCAGTGTAATCAAAGGAAAATATGGTAGATGGAAAATTAGTTCCACCATTTCATTTTTTTCA CCAATTCTAGGGAATCAAAACAACTTTTTACACGGTTATTCCATCACATCACTAAATACAAATTATAAATGGGACTACAAGTCTACAATATGACATAATT TTTTAGCAGAAATAATGCTTGAG BLAST |
Tissue | flowers |
Gene name | LI_gene_68567; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_183704
Blastp | Ethylene-insensitive protein 2 from Arabidopsis with 52.74% of identity |
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Blastx | Ethylene-insensitive protein 2 from Arabidopsis with 51.99% of identity |
Eggnog | H( )-stimulated, divalent metal cation uptake system (By similarity)(COG1914) |
Kegg | Link to kegg annotations (AT5G03280) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019444339.1) |
Pfam | Natural resistance-associated macrophage protein (PF01566.17) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |