Id Trinity | FTRINITY_DN57423_c0_g1_i6 |
---|---|
Name Transcript | Ll_transcript_183691 |
Sequence | GTCCTGTTGGGAGTTATTGAAGTTTGTGAGATCTATTTTGAAGGTGAGAGGAACAAAAGAGAAACATAGAAGAATAAGGGTTGGAGAAATCTGAGGAGGA AGGTGATTTGGATTACAATTGAGAATAATTAAAAGGTATTTGTGAATTTGGTTGACAATGATTGGATTGGGTTTTGGTCGTGTTGAGGAGATGAACGAAA TAGCTATTAACGGGTTTTGTAAAAAGTTTTTCTGATGGTGCTAAGGTTGGGTTAATAAAACATTGGATTTGTATCCGATGATTACAGCCGATTGTTGAAT AATTTATAGGGTGGTTGCTGGCATAGACGGATGTGCTATTTATTAAATTGTTATATGCTGGCTAATTATAGACTGTATTCGAAGCTTGTAATGTATCTAT GATTGACATCTAATAGATAGATAGAAATATAGATAAGTCGCTGCAATACAATTATCTAAGGCTTATTGAAAGTTTTGGCTACTTCAAAGTGTTTCTCTGA ATATCATATTTTTCCGATAGACTTATTGCTGGTGGTACGGTATTAAAGAGCAAATGGATGCAGAGGCATCAAGCACTACTAACCACCTGCCTGGCTTTCT TCACCGGTCACTTCCTGCTGTTGTACCCACACTTTTGATTTCAATAGGATATGTTGACCCTGGAAAGTGGGCAACAATGGTTGAAGGTGGTGCACGGTTT GGGTTTGGTTTGATGCCTTTCATGCTTATTTTCAACTTTGCCGCGATCTTTTGTCAGTACATATCTGCAAGGATTGGTATAATCACAGGAAAAGATCTTG CTCAGATTTGCAGCGATGAATATGATACATGGACATGCATGCTCCTTGGAATTCAAGCAGAAATTTCTATGATTATGCTAGATCTTAACATGATCTTGGG CATAGCACAAGGATTAAATCTTATTTTTGGGTGGGACTTGTTCGCTTGTGTCTTTTTAACTGCTATTGGTGCTGTTTTTCATCTGCTTCTTGCTCTCCTC CTTGACATTAAGAAGGCAAAGATCCTAGGCCTGTATGTGACAGGCTTTGTATTGCTTTCTTTTGTACTTGGAGTACTTATCAATCAACCAGGAATTTCGT TATCCATGAATGGAGTACTAACAAAGTTGAATGGGGAGAGTGCATTTGTGCTGATGAGTCTTCTTGGAGCAACTCTTGTGCCTCATAACCTATACCTTCA TTCCTCTGTTGTACAGTGGCATCAGGGACCAACTGATATTTCTAAGGAAGCCTTGTGTCATAACCATTTTTTGGCCATCTTATGCTTCTTCAGTGGTCTT TATTTGGTCAATAATGTGGTGATGAATGCCTCAGCAAATGAGTTCTATAGTACGGGTCTTGTTTTGCTTACTTTTCAGGACGCATTATCACCAATGGAAC AGGTGTTGCGTAGCCCGATAGCTTTGTTTGCTTTTTTATTGATTCTGTTTCTTGCAAATCAAGCCATAGCATTAACTTGGAGTTTAGGTGGAGAAGTAGT TGTCCATGGTTTCTTAAGATTGGATATTCCAGGCTGGCTTCATTATGCTACAATTAGAGTGATTGCCGTTCTGCCTGCCCTTTATTGTGTTTGGAGTTCT GGAGCTGAAGGGATTTATCAGCTAGTTATAGTCACTCAGGTTTTGGTAGCTCTGCAACTTCCATCTTCTGTGATTCCCCTTTTTCGAGTTGCTACATCTA GGTCAATAATGGGTGTACACAAGATCTCCCAGTCTGTGGAACTTTTGGCCTTGGTCATATTTATCGGGGTGCTTGGCTTGAATATTGTCTTTGTGGTAGA AATGGTATTTGGCAGTAGTGAATGGGTGGGTGATTTGAGATGGAATGCAGGGAATGGTGTATCTTCCTCATATATAATTCTTTATACTTCTGCCGTTGCA TCAATATGTTTCATGCTTTGGTTAGCTGTCACACCTTTAAGATCTGCCAGTGTTCAGTTAGAAGCTCAGGCGTGGAACTGGGATACGCCCGAGACTGTAT CAAATCTGCCAGTTGATGGTGAGGAGTCATATTTAACTGGAACAAGGCATCAACGAGTTATGTCGGTTCAGGTGAAGGAACCAGCACCAGCACCAGCACC AGCACCAGCACCAGCACCAGCTCTGACTCTAGCAAGGACCTTGGAGTACTCAGATGTAACAGTTCCAAGTTCTCGTCACGATATACCAGAAACTAAAATG GAGCCTGATCTACATGTGAATGATGAAAAGGAGACTCAATCTACTACATCATTTCCTAGTTCCCCTAAATCTCGTGATAAGGTGTCAGCTTCCACATCAG AGTCAGAGGCAGTATCAACTGTAGTTGATGAAGTTTCTGTTTCTAGATCTGAAGACACCAAATGTGTAAAAATAGAAACAAGTGCCCCCATTGGGAAGAG TGTGGAGTTTATGGGAGATTCAAATGCTGAGAGGGATGATGATGATGATGTTGACTCATGGGAAACTGAAGAATCGTCCAAAGTGGTCTCAACAAGTGCC CTGTCTTCAACATCAGATGGCCCTGCATCATTCAGGAGTCTTGGTAGGAAAAATGATGAAGGTGGGAATAGCATTGGAAGTCTTTCGAGGTTAGCAGGCT TAGGGCGTGCAGCAAGGCGTCAGCTAGCTGCTGTTCTTGATGAATTCTGGGGACAACTTTATGATTTCCATGGGCAACCAACCCGGGAAGCAAAGGCTAA GAAACTTGATGCTTTGCTGGGAGGGGGAATTGATTCAAGATCCACTGGTTCATTGCAGCAGGTGGATGCATGTGGAAAGGAATATTCTGAATACTTAGCA TCTGTTGGAGGTAGAGCTTCTGACACTTCAATGAATTCCGGTCTATATGACTCTTTAAAGCAGCCTAGGATGCAAAGTAGTTTAGAGTCTTCATATGGCC TTCAAAGGAGTTCGCCCTCAATTCAGGCCCAGTTATTAGATGCATATGTGCAGTCACAGAACTCCAACCGCAATCTCCTCGATTCTGGTGAGAGGCGCTA TTCTAGTGTGCGCAATCTGCCTTCATCCGAGGCTTGGGATTATCAGCCAGCTACCATTCATGGTTATCAGTCTGCATCCTATCTTAACCGGGTTAGTAAA GACAGAAACTTTGACAACTTGAATGTTTCCATGGAGTTATCATCACTGAAATCCCCTTCCACGGATACAAATTACAGAGGTTCACTTGCATTTGCTTTGG GGAGAAAGTTGCATAATGGTGCAGGTATAGGCCAACCCCCTGGGTTCCAACACGTAGCTGTCTCTAGAAATTCGCAGTTGCAATCTGAGAGGTCCTATTA TGATATTGGCTCATCAGTATCTGCAGATAATGCAGTCAGTTGCATTAATAACAAGAAGTACCACAGCTTACCAGACATTTCGGGATATGCCATCCCCCGC AGGACTGGTTATGTATCTGAGAAAAATTCTCCATGGAATGGGTCTGTTGGATATGGATCTTCTGTAAGTAAAACATATGAACCATCATCATATTCAAATT CTGGATCAAGAATAGGACATCCTTTGGCCTTTGATGAACTCTCTCCATCAAAAGTTTACCAGGAGGCACTCTCTTCACAGTTGAGTTCTGGTTTTGATAC TGGATCTCTATGGTGTAGACAACCTTTTGAGCAGTTCGGTGTTGCTGAAAAATTTGATAATGTTGCAATGGACGGTGCTGGAATTAGGCCTAATGCTGCT GCTCAAGAAACTACTTCTTTTGTAGATATAGAGGCGAAACTTCTTCAGTCGTTTAGACTTTGCATTGTGAAGCTCTTAAAACTTGAAGGATCTGATTGGT TATTCAGACAAAACGATGGAATTGATGAGGATCTGGTCGATCGCGTGGCAGCAAGGGAGAAATTTCTTTATGAAGTTGAAACTAGGGAGATGAATCAGGT CGCTCATATGGGTGAAACTCAATATTTTTCTTCTGATGGGAAACCTGGTTCTTCAATAAGGAATGATGATGCTAATTCCTCTAGTTTTTCAGTTTCCTCA GTTACTAATTGTGGGGAGGGGTGTATTTGGAGATCAGACTTAATAATAAGCTTTGGAGTGTGGAGTATCCACCGTATTCTTGACCTCTCACTTATGGAAA GCCGGCCAGAACTTTGGGGGAAATACACCTATGTGCTCAATCGTCTCCAGGGCATCATTGATCCAGCTTTTTCCAAGCCTCGTAGTCCCATGGTCCCATG CTTTTGCCTTCAAGTTCCCGCGTCACATCAGCAAAAGTCAAGCCCCTCTCAGTCCAACGGAATGCTGCCGCCTACTTCAAAACCAGGCCGAGGAAAATAC ACAACCGCATCGACGTTGCTTGATGTGGTCAAGGATGTGGAGATTGCAATCTCTACCCGGAAAGGACGTAGTGGAACCGCAGCAGGTGATGTTGCTTTCC CAAAGGGAAAAGAAAATTTGGCATCGGTTCTCAAACGATATAAGCGGAGGTTATCGTACAAACCCGCCGGAATTCATTAAAGGACTGATTCACTCTTGGC CGTGTCAGCGCCATACAACTTGTTGCATTTTGCATTAACAAAATGACTGTTCCTTGGTCTGCTTTATATCGTGATGCAGTTCATGACCTTGTATCAAATT CCATGTAGCAGATTTTATCCTTGTATGTTACATACACACATGGCAAGAATTATTGTGTAATTGCAGTGTAATCAAAGGAAAATATGGTAGATGGAAAATT AGTTCCACCATTTCATTTTTTTCACCAATTCTAGGGAATCAAAACAACTTTTTACACGGTTATTCCATCACATCACTAAATACAAATTATAAATGGGACT ACAAGTCTACAATATGACATAATTTTTTAGCAGAAATAATGCTTGAG BLAST |
Tissue | flowers |
Gene name | LI_gene_68567; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_183691
Blastp | Ethylene-insensitive protein 2 from Arabidopsis with 52.74% of identity |
---|---|
Blastx | Ethylene-insensitive protein 2 from Arabidopsis with 51.99% of identity |
Eggnog | H( )-stimulated, divalent metal cation uptake system (By similarity)(COG1914) |
Kegg | Link to kegg annotations (AT5G03280) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019444339.1) |
Pfam | Natural resistance-associated macrophage protein (PF01566.17) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |