| Id Trinity | FTRINITY_DN57426_c0_g2_i1 |
|---|---|
| Name Transcript | Ll_transcript_184123 |
| Sequence | ATTACATTTTTGTGGATGATTGATAGTGTAAGGTATCGAAAATTCAAACAATTGATTTGCGGCAAAACAGTGAAGTGCCATGGAAGCAGAAGAAGAACCT CACCATTCTCATGTTTTTCCGATTGAAGATATGAAGAATGTGGTTGCAACTGTGAGTGGCTACCATGGATTGGAGCGATTCCATCTCATCAAGTTGATTT CATATACCGGTGCTAGTTATGTTGGGAGGATGGAATCGAAATCAATCACACACTTGGTTTGTTGGCAATTCGAAGGAAAAAAGTTTGATATTGCCCAAAA GCTCAACATTATTGTAGTCAACCACCGATGGATTGAAGACTGCATAAAGGAAGGAAGGCGTGTACCAGAAGATTCTTATGTCTGGCAAAGTGGTCATGAA GTAGGGCCACTTTTACTGAAAGTTCCTCCACCCACTGTTCTAGCAAATAACTTGAGAAAGAAGAAAGTGATTAATGACGGATCATGTGTTGTTGGCTCTG AAAAGCAGACAACTGAGTTAAGTTCTGGAGTATCTGGAAATTCTGATTGGGAAGATTTTTTAATGAACAAGATACAAGCAAAGCAACAACCACCCATGCA ATTTCCTCGTATCCTCACCTAATTTTATGCTTCATATGAAGTAGCTGATTATCTGAAAGATCTCTTTTCACTTTCTATTATTCTCAACGCAAGTGCTTTA ACATACTTGCATGTGCTACGCTCTTGAATAATAGCATTATGGTTAAATCAAATGCATTGCATGTGTGTTTAGGTCAATTATAAAAATGAAAGGAAAAATT ATTTTAACATATCGATATAGGGGCGTTCAAATCCTTCTAATGCACCATCTTATATTTGCAAACCAAGTAAATGAATAATGATTTAATTTTGGTTCTTTCA GAATGCTTCCTAATATTTTTCTCTCCTGACTTTTCCATTATTAAGCAAGAGGAGCTAAGTTCTCATTCTTCTAGACGATCACGAAAACAAAAAAGAAATA TCTGCAATGATCATGGAGTTAGTAATGTGGCTGGACCTTCTCGTAAAGGAAGAAGGACTGGGAAAAATATTGTAGATGAAGCGGCCTTGGATCCTATCAT TTTAGATTTAACCCGGGAGGACCACCTTAGTAGAGTGAATAGACTACAAACTGATGGTGCAGCTAGCTCTAGCCCTTCTGGTGGTGTCAATAGTAAAAAC ACTCCAGAAAATAGAGAAGGAGCAGATGCTGGATTACATAATCAAAGTGGAACTATGAATATAGCTTCAAATGTCATTGAACAGATAATAGATTCAAATA ATGTATCTACCAATAGGAATTCAACTTTGTTTGAAGAGGATCCTTTACCTAAAGGGCAAACATCAGTATGCACTGGTGCTGAGAATATACCAGATGATGA TCAGTTTGATAACATTGGAGCTTTGCCTACTTCAAAAGAGCTGTCATGTGTTATATGTTTCGAAGAGTTCAGCTCAACAAGGGGGATCTTGCCGTGTGGA CATCGGTATTGTTATCAATGCATCCAGAGTTGGGTTGATCGTAGGACTTCAATGGGAAAAAGTTCAACATGCCCTTTGTGCAAGGCAAGTTTTGTAATGT TCAAGAAAGTTGAGCATGCAGTCACTGCTGATCAAAAAGTATATTCCCAGACAATCCCATCTGGCAATTCAACCTCAGATATTTTTATAAACACAGTTCA AGAATTTCCCCATTTTGGTTCTGAGTCAGGTGCTTGTGTGGTTTGTCGTGGTAGGGAACCCGAGGATCTGCTCCAAAGTTGCGATGTTTGCCAACACCGA AGAATCCATTTATATTGCCTGGACCCTCCTTTACTACCATGGACATGCAGTCACTGCAAGGATCTTAGGAGGCTTTATCATCATCATCACTCGTATTAGC GGGGTATAGAGGGTGAGTCTTGACAAGCAGTAAGACCTGAAGGTCCTGAATTTGAATCCCGAAAACAACCATTTTGTTTGCAAGGATAAGGCTGTATATA TGTACTTTCCCTAAACTCCGACAGGTGGAAGCCTCACACACCAGGCCGTCTACTCATATTAGTAGGTATATTTCAATCCATTGCAACCAGTGGAATCTCT AAATTTGTTTGAAGTTATATGTTTTTCATGGAAAAGCAGGTGATGAAATACATTGTAATTGGATAAAGCTTCTGCACATGGTGTTCATTTTTTTTGGGTT GGAATATGTTGTTGACCTGGGC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_68589; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_184123
| Blastp | PHD and RING finger domain-containing protein C126.07c from Schizosaccharomyces with 28.57% of identity |
|---|---|
| Blastx | BRCT domain-containing protein At4g02110 from Arabidopsis with 32.98% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (SPCC126.07c) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019451490.1) |
| Pfam | Zinc finger, C3HC4 type (RING finger) (PF13920.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |