| Id Trinity | FTRINITY_DN57430_c2_g2_i4 |
|---|---|
| Name Transcript | Ll_transcript_185005 |
| Sequence | TGGCAAGTGAAATCATGATTTTTGATGAAAAGAAAGAGTAATAAAATATGTAATGTTACAAGATGATATTCAATTTTAGCCCTCGGTCTTAAAATTTAGG AATTCATCAAGCAATTTGTCAAAAACTGTATGAGATTAAGTAGCAAAATATAGATCTAAATCACATCGAAAGAAACAAATATGAGTTCTTGAATTAGAAC TTTAGAAGTGTCTATACCACTGGATTTTTACTTTTATTCAATTAAAATATAGATATGTGGTGCATGTGATGAAAACGGTTCTAAAATACAAAAGAAGATT TGATGGTATTTATGTAATAAAAATGAAGAAATAAGAGGCAGAAAGAAAGAACTGCCCTTTCTTCATCTTATCTTAATCTTTCTATCTCTCTCTCTCTCTG ATTGGAATTCGAAGAAGATGCAGCAGGGTGGATATGCAGGAGGTATGGTTCCACAGCAACAGCAACAGCAACATGAAGCGTACATGATGATGCCACCTCA GCAACCTACCAGCTCCGATGAGATCCGTACCCTCTGGATCGGCGATCTCCAATACTGGATGGATGAGAATTATCTCTATACCTGTTTCGCTCACACCGGC GAGCTTGCTTCACTCAAACTCATTCGAAATAAGCACACTACCCAATCAGAAGGTTATGGATTTCTCGAGTTTACCACTCGTGCCGCTGCTGACAGAGTAC TTCAATCATATAACGGTACCATTATGCCAAACGGTGGCCAGAACTTCAGGATGAATTGGGCAAGTTTCAGTGCCGGTGAGAGGCGTCATGATGATTCTCC TGATTACTCCATTTTTGTTGGAGACTTGGCTGCAGATGTTACTGATTACCATCTCCATGAGACTTTTAGCGCTCGTTATTCCTCAGTTAAGGGAGCCAAA GTTGTAATTGATAGGCTCACCGGAAGGACTAAGGGTTACGGTTTCGTTAAGTTTGCAGATGAGAGTGAGCAAATCAGGGCCATCACTGAAATGCAAGGGG TTCTTTGCTCTACAAGGGCCATGCGGGTTGGACCAGCATCTAATAAGAACCCTACCACTCAACCTAAAGGTTTCTCTCTTTCATCATCTCAATCTTTGCT TCACATGCTGCAATCCTTCAAATCATAACTTAGCCTGTTAATCATACTGCTTAGATTTCCTTACTGTCTAGTTATCTTTTGTGTGTACATCAATTTATGT TTCGGCATGAAGTCCAAAATCATTTCTTCATGTGATTTCCTTTAAAAACTTGGGCTCACTAAATGATATAGAATAGGTAAATCTTATTGAACTCATGTTG TCTCGAAGCAGGGGGTCAAGAGGCTCTGTTATCTCGGAGCCTGTTACTGATTTCTGCTGAAATGGTTACCCTTTTAGTGCCTGGCCTTGCATAGGTTAGT TATCCGTTTATGTCTTGCCCATAGTTTTTGGTGGCATTTTCTTTCCCCCCTACATTCCGCAACTATTCTTGTTACGTATATTTTCTTTTCATTTCATGGA GCCAAATTACATAGCTCAGTTCTTCTAATTCTGATTACTTATATTTTCAGCCCACTGTTTCTTAATCTTCACTTCTTTAGTTTTACTCTTTTCGGCACAA TGCTTTGCAATTAAAGTTATTACTTACTTTATCATTGCTCACTCCTTCAGGCCTTCTGTTCCGTCAAAATAATAAGTGCCTTCTCTTCCCATCCCCTTGA AATAAAAAGAAAAAAAAATTGTCTCTGAAAAAAATTAACTTGTGAAGTTTTCTATCACTTGCGCAATCACTTGATTGTGTTATACTCTAATCTTATTTTC AATCTCTAAGGCCCGTGAGTGTTCATATCTTTTCGTAAGTACTGATGAAAAGCATTTTAGATGTAGGGTAGGAAGAGTATCAACACAGTCTCTACATGTT TCAATGCATATTACATATGTGTATTAAACTTTCTCCTTTGCAACCTTTGCTCTCGGTGCATTTTCGTTAGTTACTTACAGAGAGAGAGAGAGAGAGGGAT TCATCATAGTGATCCAACTATGCCAAATACCCTGCCCTTGGTATTGTATGACACTCTTAAGTTAGTTGAATGATTGGTTTATTTTTTACTTGTGATTTCA TATATATTATTTTAGTGTTTTAACTTCTCATATTCCATGGTTTTCTCTGCATGTAAGGCACCTATAATCTTTTGCTTCTGTGGTTGCTCTATATGTCTGC ATAAATTTTGAAAATGAATCATCTGATGCTGAAATTCGGATGTTAAAAAATTCCTAATGGATGTCGTGGCTGGATGTATAAACATATTATTCTTAGATGT TTTGCCTTTTATTTTTAAAAAGTTAGTTGGTATAATTTTTGCTCTGATTGGTGTGTTTTCCATGAACTGCTTCCTCCCCCGTGTTAATGCCATTTATCTT CTATTTCACATGTAATTTGCACATGCAGCTCCATATCAGAATCCTCAGGGGGCACAGAGCGAGAATGATCCAAATAACACAACTGTGCGTACTTCTTTGC ATCATAGAAGAAACTATTATGTCCTGCAAGTTTGTGACTCAATTTTTTTGTTGCAGATTTTTGTCGGCAATCTAGATCCTGATGTCACAGACGACCATCT TAGACAAGTTTTCGGGCAGTATGGTGAGTTAGTTCATGTGAAGATTCCGTCAGGCAAGAGATGTGGGTTTGTCCAATTTTCAGACAGGGGCTGTGCAGAA GGGGCGCTGCAGGCTTTAAATGGAACCATTTTAGGTGGACAAAATGTTCGGCTTTCGTGGGGCCGAAGTCCTTCAAACAAACAGACTCAAACAGATCCGA ACCAGTGGAATGGTGGTGGAGGATATTATGGATATGGTCAGGGTTATGAAAATTATGGTTATGCTCCTCCTCCTCCTGGACAGGACCCCAACATGTA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_68620; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_185005
| Blastp | Polyadenylate-binding protein RBP45 from Nicotiana with 67.59% of identity |
|---|---|
| Blastx | Polyadenylate-binding protein RBP45 from Nicotiana with 72.54% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019463041.1) |
| Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |