| Id Trinity | FTRINITY_DN57432_c1_g1_i9 |
|---|---|
| Name Transcript | Ll_transcript_183562 |
| Sequence | GTAATTAATTTACCTATTTTCTTGGCTTAAAAGTCTCACACCTATCATATTAGAAAGAAACACCAACCCAAGAAAAAAGGGTGAGAAGTATAGACAACAT AAAAAGATAAGAGCCATTTCCTGCTTGGTTTTTTCAGCATTCAAAAGAAAGGAATAAAAAAACATTGTTGCATGGTTAATAAGAGTATAAGACTATGAAT ATTGTATGCATGTGTGTGTGATAGTTTGTGTAGAGATATGTTAGGTGGTGGATGCAGCATAGTATGGTTCAGGAGAGATCTAAGGGTGGAAGATAATCCA GCACTGAGTGCAGCAGTTAGAGCTGGAACTGTGGTTGCACTTTTCATATGGGCACCTGAAGAAGAGGGTCAATATCAACCTGGTAGAGTTTCTAGGTGGT GGCTCAAGCACAGTTTGGCTCATCTTCATTCATCTCTTAGAAGTCTTGGTACTCCTCTTATTACTAAGAGATCCACTAATAGTGTTTCATCTCTATTAGA TGTTGTTAAGTCCACTGGAGCCACTCAACTCTTTTTTAACCACTTATATGATCCCTTGTCACTTATCAGGGATCATCAAGCAAAGGAGGTTCTGACTGCT CAAGGCATAACGGTACGATCCTTCAACGCGGATTTGTTATATGAACCATGGGATGTCAATGATGCCTGTGGCCAACCATTCACAACTTTTTCTGCCTTTT GGGAAAGATGCCTTAGCATGCCTTATGACCCTGACTCACCTCTTCTCCCTCCTAAGAAGATTATACCAGGTGATGTATCAAGGTGCCCTTCTGATGCATT GCTGCTTGAAGATGAATTAGAGAAAGCAAGCAATGCACTTCTTGCTCGAGCATGGTCACCTGGGTGGAGCAACGCTAACAAGGCTTTGACCGCATTCATA AATGGTCCACTGCTTGAGTATTCGAAAAATCGCAAGAAGGCTGACACTGCCACGACCTCATTTCTTTCCCCCCATTTGCATTTTGGTGAGTTGAGTGTGA AAAAGGTCTTCCATCTTGTCTGCATCAAACAAATTTTATGGGCAAACGAAGGAAACAAGGCAGGTGAAGAAAGCGTTAACTTGTACCTCCAGTCTATTGG CCTTAGAGAGTATTCAAGGTACATTTGTTTCAACCACCCCAATAGTCATGAAAGGCCTCTTCTAGGACAGCTTAAGTTCTTTCCTTGGGTAGTGAATGAA AGCTATTTTAAGGCATGGAGGCAAGGCAGAACTGGTTACCCATTGGTGGATGCGGGTATGAGAGAGTTGTGGGCCACTGGTTGGCTGCACGATCGTATAC GTGTTGTTGTTTCCAGTTTCTTTGTCAAGGTTTTGCAGCTCCCTTGGAGATGGGGAATGAAATATTTCTGGGATACCCTCTTGGATGCAGATCTTGAGAG TGATGCTCTCGGTTGGCAGTACATATCTGGCTCTCTCCCTGATGGCCGTGAATTAGACCGGATAGATAATCCACAGTTTGAGGGATACAAATTTGATCCA AATGGAGAATATGTACGGCGCTGGCTTCCAGAGCTTGCTAGACTACCAACTGAATGGATACATCATCCATGGAATGCACCGGAAGCGGTACTCGAAGCTG CAGGAGTTGAGCTTGGATCAAACTATCCCCTTCCGATTGTAGGAATAGATGCAGCAGAAACCAGATTAGAAAAAGCATTATCAGAAATGTGGCAACTAGA AGCAGCTTCAAGAGCTGTCACTGAAAATGGAACCGAGGAAGGGCTTGGTGACTCATCGGAATCAATTGGTGTTGCTTTTCCTCAAGACATCCAAATGGAG GAAAGTGATGAACCTGCAAGGAACAATTCTCCTCCTGTTGCTCGACGCTACCAGGATCAGATGGTTCCAAGTATCACTTCTTCCCTCGCGAGAGTTGAGG AGGAAGTAACTTCTGATATTAGAAACTCGGCAGAAGAAAGCAGAGCAGAAGTACCAATAAATGTAAACGCGCGGCAAAATGCAAGAGATACATTGAATGA AAGGATGTTGCAGACTACTCAAAGAAATGCACAACTACAGTACAATACTGGAATGCACATGAGAAATGCAGCCGAAGATTCAGCAGTAGAATCGTCAAGT AGTAGGATGAGGAGGGAGAGAGATGGAGGCATAGTTCCAGAATGGTCTCCTCCGGCTTCTAGTTACTCGGAGCAGTTAGTAGGAGATGAAAATGGTATAG CTAGCAGTTCATCTTACTTGCAAAGGCATCCTCAGTCTCACCAATTGCTGAATTGGAGGGGACTACCTCAGACCGGGTGAGATTTCTCAGATCACTGAAT TCCGAAAGCATTAATAATCTATACCTTATACCACTTTCGAAAAACTTCGTCACAGGATCCTATGTTCTAAACATTTGAAGAACATCAAATGATTTGCCAA TCTTCCAACTGAAGGTTTCCATATTTGGTTTTGGTTATTTGTAGAGAATGGCTGCATTAAAAAAAGTAAGATTTTGATATAAGCTATTTTGAACACAAAA TAAGTTCATCCACGAACTAAGTTCATACACAAAATAGATGACTGAGTTTCTTAAGTCTAATGGCCGGAGTTCTAATCAATGCACACAAAAAACAAAAACA AAACAAGTTAAGGGAAACATATATTTTATGTTGACTCCTAGATTTTCATTACTTGTGACTCTTTTTTATGTTATCACTCACTATTGATATTTTAATTACA GGTGATTCATATATAAAGCAAACAGATTAGAAGCAAGAAGTTGGATACTATTTTCTTAAGATAAAATGGGATGGTGAACCTGCATTGAACATACATGTAT CAATTTCGTACAACTTTTACCAGTCTCAATACAAGATTAATAGCTGACCTTTGATGTGTATGAAAATTTGAATTCATAGAGCAATTCATCTGCAGATCCA TTTTGGTTTCTTGTACAATATTTGTTGGCTTGGTGTATAGTATATTTTGTGTAGTGAGGGAGAAAGAGACACTATAGGATCTTTGGTCCACTAATAAACT TAGGTTTGTATTTATTACTTAAGGCCAATATATTACTTTTATCAGTTTTATGATCCATGCTTTATTTACATTTTGTATGCAACTCATCTTGGTGCATAGA AAATGTAAAGTGCACCTCATCTTGGGGCTCACATTTCTGAAAATTGTGTGGCATTACACTCTAAACTGCTAAAACACATTTCTTTATATTTATTCCTGCC AGACAAGTCATGCTTATGTGGGGAGAATCAGTC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_68633; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_183562
| Blastp | Cryptochrome-1 from Arabidopsis with 74.74% of identity |
|---|---|
| Blastx | Cryptochrome-1 from Arabidopsis with 74.26% of identity |
| Eggnog | deoxyribo-dipyrimidine photolyase(COG0415) |
| Kegg | Link to kegg annotations (AT4G08920) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019415696.1) |
| Pfam | DNA photolyase (PF00875.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |