| Id Trinity | FTRINITY_DN57447_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_185938 |
| Sequence | CAACGAAGGAAAATGACATATTTTTGAAGAGGAAAAAAGAAAAAGGGGGGACTTAATGACTAAGTGTGAAATACGTTTGAATGATTCACAATCCTCATCC ATTTAATTTAGTCATTTCCAGTCAACATAGTCCACAATCTCAGTCAAATTCATACAAATCTGAGAAAGCTATAAAACCAAGAAAAAAACACGAAATCAAA CCTCTTCACTCTTTTTTCTTCGATTAGGGTTTCCCTCCCAATTTCACCACATTCTCTCTTTCTTCAATGGCCGACCCCATTAACATCACCTCTGATTCCC TACCCCAATCTCCCTCTCCCCCCGCCGTCAACGACGATCTCCCTCCGCCACCTCATCCTCCGCAGATCCACCCGTCCAGGCGGAGGGACCGCCGTGACGA CTATCGCCGTGATTACCATGACCGCAACTTGTCCCCTAGGGACCACCGCGATAGGGACTTCAAGCGCCACCGCAGCCCTAGTCCTAACTACCGTGACCGC CGCTATTCTCCTCCCCCGCCTTCACGGCGCTCCCCTCCTCAGTTTAAGCGCAACAGGAGGGGAAGCCCCCGCGGCGGCGGTTATGGCCATGATGACAGAT CTGGCTATGATTATGCTGGTGGCTATGAACGAGGAGGTGGAGGAAGGGGCGGAGAGAGGTCTTATGGTGGAAGATTTGGACATCGACCTGCTGGACGATA TCAAAATGGAATTTCTGATGTCAATCGCAGTTATGCAGGCTTGCCAGGTGGTGGTGCACAAAGAGAGGGGTTGATGTCCTATAAGCAATTCATCCAGGAG CTTGAGGATGATATTCTGCCATCTGAAGCCGAGTCCAGGTATCAAGAGTACAAATCAGAGTATATTTCTACTCAAAAGCGAGCTTACTTTAATGCTCATA AGAATGAGGAGTGGTTGAAAGATAAATATCACCCGACAAATTTGCTGACAGTAATCGAAAGGAGGAATGAAAATGCCCGAAGGCTGGCAAAGGATTTTTT GCTTGATTTGCAAAGTGGAACGTTAGACCTAAATCCTGGTTTAAATACCTCTTCATCCAGCAAATCAGGGCATGTAAGCGAGCCACATTCAGAGGAGGAA ACAGATGCTGGTCTTAAACGGAGAAGACATGCAAGGGAACCTAATAAAGATAGTGATTTCCTAGCTGCTCCAAAGGCTCACCCTATTAGTTCTGAACCTA AACGCATACGACAGGATATTCAACAAGCCCAGGCTGTAGTTCGAAAGCTTGACATGGAGAAGGGAATTGAAGATAATATTTTATGCACAAGTGATCACAC CAAAAATGATGATAAGGCTCGCACTGGATCTGTTGGCCCCACAGTAATTATACGGGGCTTAACATCTGTTAAGGGCTTAGAGGGTGTTGAGCTACTTGAC ACACTTATTACTTATCTTTGGCGGGTTCATGGTGTAGATTATTATGGCATGATTGAGACAAATGAGGCTAAGGGTTTTAGGCATGTGAGACCAGAAGGAG CTGGACCTGAAGAAAAAGGTAAATCAGGGTCTGAGTGGGAGAACAAAATTGATTCTTTTTGGCAGAAAAGGTTGAATGGCCAGGATCCTTTGGAAGTTAG GACTGCTAAGGAGAAGATAGATGCTGCAGCAGTTGAATTCTTGGATGCATATGTGCGAAAAATTAGGGATGAAAAGTATGGGTGGAAGTATGGTTGTGGG GCTAAAGGCTGCACAAAGCTTTTTCATGCTACCGAATTTGTGCACAAACATCTGAAGCTAAAACACCCAGAGCTTGTCACTGATCTGACTTCAAAATTGA GCGAGGATCTTTATTTCCAAAATTACATGAATGATTCAGATGCACCCGGAGGAACGCCTGTCATGCAGCAACCTCAGAGGGTCAAGTCTCTTAAGCAAAG GTTAGGAGGTCTGGATGGCCGACTGAAAGATGATCGTGGTAGTCGGCGAGATCATGATAGGAGTGACAGAATAAATGGAGATAGGCCTGACAATTCCCCA TCTGGTGAGAGGCAGTTGGGAAACCATGATGAAGAAATGTATGATGCTTATGGCGGGCCTGCTGTACCTCAATTTACCTCAGATATGCCCCCTCCTCCCC AAGTTTTGATGCCTGTACCTGGGGCTGGGTTGGTTGCTCTTCCTATTCTTCTGACTCTGATCCACTTTGGTATTGTTTTATTGAGATTTTATTGGTACTT ACATAATTTGTAACCCTACAGGCCATTGGGACCTTTTGTTCCTGCTCCACCGGAAGTTGCAATGCAGATGTTAAGAGAGCAAGGGGGCCCACCTTCATAT GATGCTCCTGGTAGGAAGATGCGTTCTGGTCCTCATGTGGGTGGGTCAGCACCAATAATTGCTGTTCCTCCCGCTTTTAGACCAGATCCTCGACGGATGC GCAGGTAAATGTTCTGCAGGACCCTTGATCATATGTTCAATTATGATATCTCCAAAACATGCTCTACCTCTTTTCTGCTCATGCATGTGATCTTTAGACT GTCTGCATTTCAATAACATAAAAGGTGTAGGTAGAAAGAGGAAGGCATAATTTGTTTTCACCGTAACTAATGGTCCTTGTAACCATTGATGTTGGGTCCG TGCACAAAACTTGTATCTATCTCTCTTCAACATGACTGGATCTTAATCCCACTTAACATATGTGTTTGTTATCTGTCATTAACTTTATTCTGTTGGTGTT GCAGTTATCAAGATCTGGATGCCCCAGATGACGAAGTCACGGTGATAGATTACCGGAGTTTGTAGGTGTCTTGGGTTTCTGTAATTTCAATGAGATCAGC AGTCTGACTGTATTAATGAGATTATGCTCCATTTTCTTTTGTGAATTTGTTTTGAGGATTTTATCTGTTTTATATGGTGTGAATTTGAGAGGAAATTGAC TTAGATATTGCACTGGAATTTCATTCTGATTGACTTGCAGATTTCTTGAACCAAAATGTTCCATCTGACTGCATATAAAGACGGTTTTATGTTTGGAGAC AGTTTTATTCATCCATTATCACTTTAGACCTACCTTGCAATGCATTTTCTGTTTATAATTTTATAAACCTTATGGGAGAGATAAAGGTTGGAGACCGTAC TACGAGTTACAAGTTATTAGATTGAAGTATTTTGGGTTAATCATTAAAGATGGTGGAGGAAATGATGACCTAAACCATAGGCATTAGGTCGATTGGATGG AATGACAAAATGTTTTAGTTATCATGGGATAGAAATGTATTATTTAAGCTTAATGAGAAGTTTTATTATATAATATAAAATCAATAACACTACATAATAG GGTGAGCATGATCTGATTCTACCTGTTTAGTTGGTATGGTTCAATCATGATTGAGTCTGAATAAGATTTTATTTTATTGGGGTTTAGGGTTAGGTTCGAA TTAAAAAATTAGACTCAGTTAATATTTAGGGTTAAATATGGACAGTGTATGACTCAACCTCTATGATCATGTTTGGAAGTGGCTCTATTTAAATGTATAG ACTATAGAGTAATGATAAGTTTT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_68731; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_185938
| Blastp | Serrate RNA effector molecule from Arabidopsis with 57.79% of identity |
|---|---|
| Blastx | Serrate RNA effector molecule from Arabidopsis with 54.07% of identity |
| Eggnog | Serrate RNA effector molecule homolog(ENOG410XR8S) |
| Kegg | Link to kegg annotations (AT2G27100) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019440877.1) |
| Pfam | Domain of unknown function (DUF3546) (PF12066.7) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |