Ll_transcript_185998

• Id Trinity: FTRINITY_DN57452_c0_g2_i6
• Name Transcript: Ll_transcript_185998
• Sequence: CTCCTATTCTATGTGGGAAAGAGGAAACAATCAATTATTAATTTCTAATTATTGTGTTAGCAAAAAGGAAATTAACAAAAGCGGTAAAAGGAAAGATTCT TTGTGTGTTTACGTATGAGACACTGTGTTCTATCTCTCACTCTCACCGGCGATATCGTCGGAATTTCCGGTTTTTTCTTACCCGATCACCAAATTAGATT CAATCTTCAACACCATTTTTGCGATACTCGCGAAAAAAGCGTATTCATCACATAAAATACCCATTCTCTTCTCATTTCTCAGTTACTGATTCCAACTCTT AAGTGGTTAGAGATGGTGGATTACGTCAGCAGCGACGACGGTTACCAATATTCCGACGATCAAGATTTCTCTGCCGACGCTTACGAAAGCGACGAAACCG ATTATCAGTTGGTTACTACCAAGGCTTCGTCTACTATGGTGGTTACGAAAGAGTCGCTGCTAGATGCACAGAGGGAGGATTTGCGAAGTGTGATGGACAT GCTATCGGTGAAAGAGCAACATGCACGGATTCTGCTTATTTATCATCGTTGGGATGTGGAGAAGTTGTTTGCAGTGTATGCGGACAATGGGGTTGCACAT CTCTTTGCGGAGGCTGGTGTAGCTTTGGATAAACATCATCACTCTAACTCGTTAGTTCACGCTTTAATAATGTGTGAAATCTGCATAGAAGATATTCCTA GTGATGAAGCAACAAGAATGGACTGTGGTCACTGTTTTTGCAACACATGTTGGACGTCGCACTTTGTTGTCAAGATAAACGAGGGCCAAAGTAAACGCAT TAGATGTATGGCACATAAATGTTATTCCGTTTGTGATGAAGCTGTTGTAAGAACTCTACTTGGTAGAAAGCACCCTGATATGGTCGAGAAATATGAACGC TTTCTTTTTGAATCATACATCGAAGACAACAAGAGAATTAAATGGTGTCCTAGCATACCTAACTGTGGGAATGCAATACGTGTTGAAGATGATGAATTAC ATGAGGTAGAATGTGCATGTGGTTTACAATTTTGTTTTAGTTGCTTGTCAGAAGCACACTCCCCTTGTTCATGTCTGATGTGGGAGCTTTGGGCTAAGAA GTGTCAAGATGAATCAGAAACTGTTAACTGGATAACAGGTAATACAAAACCTTGTCCAAAGTGCCACAAGCCAGTGGAGAAGAGTGGTGGATGTAACTTA GTTAGCTGTATCTGTGGCCAAGCATTTTGTTGGGTGTGTGGTGGAGCCACTGGCCGAAATCATACATGGTCAAGTATAGCTGGTCATAGCTGTGGTCGTT ACAAAGAGGAAAAATCAGCTGAACGGGCAAAGCGGGATCTAAGTCGTTATATGCACTATCATAGCCGCTATAAAGCTCACACAGACTCCTTCAAGCTTGA AAGTAAACTTGAAGAGACCATACAGAAGAGGATTGATATTTCAGAAGAAAAAGGTTCCAAACTCAGAGATTATAGCTGGGTAACTAATGGTCTCTCCAAG CTTTTCAGATCTAGGCGTATCCTGTCATATTCATATGCATTTGCATTTTATATGTTTGGAGATGAGCTTTTTAAGGGCGAAATGCAAGAAACTCAAAGGG AAATAAAACAGAACTTATTTGAGGATCAACAGCAGCAGCTTGAGGCAAACGTTGAGAAGATCTCTAAAATTTTGGCGGAGCCTTTTGATATCTTTCCTGA TGATAAGATTCTGGAGATAAGAATGCAGATAATCAATCTGTCGACTGTTATCGACAAACTTTGTCAAAAAATGTATGATTGCATCGAGAACGATTTATTG GGCTGTCTCCAGAAAACTCACGACATAGCTCTATACAAGTCAAATGGCATAGAGAGGGCATCAGAACATTCGGTTTTGAGCAATAAAGGCTAGTGATACT GGTAAATATATCTATTGTAGGTTTTTGTTTTAACACTAGAAGCAAAACATTTTGCATTAGCCATTTATGAGTTCTCTCTATAATATTAGAGGGGGAATTT AGTCAACCAATGATTATTCTGACATGTTATCAAATAAGGCTTGGTTTTTGCTATTATTGAACAACTAGTTTTTGATGGTTTTGCTTCGTAGCCACATTTT ATTTTTAAAATACCTTGTATGGTTTTATGGTAGTGACCATATGGCATAGATATTCAATATCATATGGTTTTGATATGGAAGGAGGGAGAGAAAAGGAATA ATCAG
• Tissue: flowers
• Gene name: LI_gene_68754;
• Additional information: details;

Expression of Ll_transcript_185998

FPKM

• FPAB: 0.7
• FPNAB: 2.3
• LF1: 1.1
• LF2: 0.6
• LF3: 1.1
• LF4: 1.1
• UF1: 0.6
• UF2: 1
• UF3: 0.6
• UF4: 0.6

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_185998

• Blastp: Probable E3 ubiquitin-protein ligase ARI2 from Arabidopsis with 66.34% of identity
• Blastx: Probable E3 ubiquitin-protein ligase ARI2 from Arabidopsis with 66.93% of identity
• Eggnog: RING finger) protein(ENOG410XP9Y)
• Kegg: Link to kegg annotations (AT2G16090)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019413349.1)
• Pfam: IBR domain, a half RING-finger domain (PF01485.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;