Ll_transcript_186000

• Id Trinity: FTRINITY_DN57452_c0_g2_i8
• Name Transcript: Ll_transcript_186000
• Sequence: GGAAATTATTACTGTGCAAAATTGAAATTACAAAAGGGAAAAAGAAAGGTTACTCGTGTATGTGTGAGACACTGTAGGGTCTCTTTCTCTCCGGTGCTAT CGTCGGAATTTCCGATCACCAAATTGGATCCAATCTCGAAACCCTTATTTTTCCGATACTTACGAAAAATCGTATTTATCTAATAAAATATTCATTCTTT GTTTGTTTCTTAGTTATCCAATCGAATTTTTGAGTGGTTAGGGATGGATGATTACGTCATCAGCGACGACGATTACCAATATTCCGACGATCAAGATGAT TCCGTCGAAGCTTACGAAAACGATGAAACCGATTATCAGTTGATTACTTCCAAAGGCCCAAATACTCAGGTGATTACAAAAGAGTCACTGCTAGCTGCAC AGAGGGAGGATTTGCGGCGGGTGATGGATATGCTATCAGTGAAAGAGCAACATGCACGGACCCTGCTTATTTATCATTGTTGGGATGTGGAGAAGTTGTT TGCAGTGTACGTGGACAAAGGGATATCACATCTCTTTGCTGAAGCTGGTGTTACCATGGATAAACATCATCACTCTGATTCGTCATTCCGTTCTTTAATA ATGTGTGAAATCTGTATGGAGGATGTTCCTATTGATGAAGCAACAGGAATGGACTGTGGTCACAGTTTTTGCAACACATGTTGGACGGAGCATTTTGTTG TCAAGATAAATGAGGGCCAAAGTAAACGCATTAGATGCATGGCTCATAAATGCTATTCCATTTGCGATGAAGCTGTTGTAAGAACGCTGCTTGGTAGAAA GCACCCTGATATGGCCGAGAAATATGAACGCTTTCTTCTTGAATCCTACATTGAAGACAACAAGAGAGTTAAATGGTGTCCTAGCACGCCTCATTGTGGG AATGCAATACGTGTTGAGGATGATGAATTATGTGAGGTAGAATGTTCATGTGGTTTACAATTTTGTTTTAGTTGCCTGTCAGAAACACACTCCCCATGTT CATGTGTGATGTGGGAGCTTTGGGCTAAGAAGTGTCGAGATGAATCAGAAACTGTTAATTGGATGACAGTTCATACAAAACCTTGTCCAAAGTGCCACAA GCCAGTGGAGAAGAATGGTGGGTGTAACTTGGTTAGCTGTATATGTGGCCAACCATTTTGTTGGGTGTGTGGTGGGGCCACTGGCCGAAATCATACTTGG TCAAGTATAGCTGGCCATAGCTGTGGTCGCTACAAAGACCAAGAAAAATCAGCTGAACGAGCAAAGCGGGATCTATATCGTTATATGCACTATCATAACC GTTACAAAGCTCACACAGACTCCTTTAAGCTTGAAAGTAAACTGAAAGAGACTATACAAGGGAAGATTGATATTTCAGAAGAAAAGGATTCTAAACTCAG AGATTATAGCTGGGTAATTAATGGCCTCTCCAGACTTTTCAGATCTAGGCGTGTCCTATCATATTCATATGCATTTGCATTTTATATGTTTGGAGATGAG CTTTTTAAGGACGAAATGTCAGAAGCTCAAAGGGAAATAAAACAGAACTTATTCGAGGATCAACAGCAGCAGCTTGAGGCAAATGTTGAAAAGATCTCTA AAATTTTGGAGGAGCCTTTTGATACCTTTCCTGATGATAAGGTTATGGAGATAAGAATGCAGATAATCAATCTGTCGGCAGTTATTGACAAACTTTGTCA AAAAATGTATGACTGCATCGAGAATGATTTGTTGGGTTCTCTCCATCAAACTCACAACATAGCTCCATACAAGTCAAAGGGCATAGAGAGGGCATCCGAA CTATCGGTTTGGAGCAATAAAGCTAATAATACTGGTAGAATAGCAGAAGTTGATCGGCCTTCTGGATCAGGGAGCTCAGATGACCACAAATGTTCTTCTC ATAAGCGTGCTAGAACAGAAAGTGTTGGAGGTCGTGGTGGTGCCTTTTTTGATCTAAACTTGCCAGCAGAGTTTGTAGACAGAAATTGACTTTGAAGGAG GAGACCTTATATACACACAGGTGTACATGGCTAACAGAAATTGCTTTTGCTGCCTTGACCGAGTTAATCATTTTGGTCATGATATGACATCCATGGATGC AATTTACCCTCCATTTGCCTCAATCCTGCTTCAAATCCTGGGGCTGTGTATATATATATAGCCTTGAGGCATTTATTTACTAATAGTTTATGTCAAATGT GTATTTGTGTTTTGAGCACCCTGAGGACAAGTTGTAGGATGCTTTCATTGGTATCTTATGGAGTTGCAAATAAAAGTAACTTCACTGATTTTTTTTCATT GTTTTTCTCCTTCTACTCTGTTACTTTTCTCTTTAAGACAGACAATTTTCACATGAAATTTCTTTCTAAAATAATTAGGGAGTATAGTACTCTTATTTGA ATTGATTGAAAACCCT
• Tissue: flowers
• Gene name: LI_gene_68754;
• Additional information: details;

Expression of Ll_transcript_186000

FPKM

• FPAB: 11.7
• FPNAB: 8.9
• LF1: 7.9
• LF2: 8.7
• LF3: 9.9
• LF4: 8.7
• UF1: 5.5
• UF2: 8.1
• UF3: 10.2
• UF4: 9.8

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_186000

• Blastp: Probable E3 ubiquitin-protein ligase ARI1 from Arabidopsis with 65.16% of identity
• Blastx: Probable E3 ubiquitin-protein ligase ARI1 from Arabidopsis with 66.32% of identity
• Eggnog: RING finger) protein(ENOG410XP9Y)
• Kegg: Link to kegg annotations (AT4G34370)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019454167.1)
• Pfam: IBR domain, a half RING-finger domain (PF01485.20)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;