| Id Trinity | FTRINITY_DN57458_c0_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_183516 |
| Sequence | CACCGTTGAAGAGAGCAAATCCCCGTCCATTTACTAGACCTCTTGTAGTTACTCTCTTCATTGACAGTACATCCTATGTTCCCAGAATTGTTCGAGAGTT TGTCTAGAACAGCGACAGATCTTAGAACCATACACTCCCACACTGCACCTTCTCTGTCTCTCTCTCTTCTATGCTGTTATAAGTTCTAACCCCTCTGTTT CTCTCTCTTCTACTGATAACTATCGTTTTCTTTCTAAAGAGTGAGACCCTCGTGAAGTGCATGTGAAGCTTGCTCAGTGAGAGATCCACCACTTAATAAT TCATCCAAAAGGGTCACCTTCCCTTTTCTGATTCAGAAGAGATTCTACTGTCAGAAGGGTTGATGTTGTGAACATGACTAGGGCTGTTCGCAATAGGGTA CTGAAGGATGCCAATGGTGACATTAGTGACCATCTCCGCAATCATATCCATTTAACAAATTGCATTCACTTGAAGAACCATATGCACAAGAACAGTCCCA TACTAGCTGATAGGACACTCATGAGGGACCTTGTTGTGCTGCAGAGATCGCGCTCTCTCAGGGACCCTTCTGCGAGTCCTCCATCGTGGCATTCACCTTC AGTAGTTGATTTGCTTTTCAAGAGTGCTGAAAATGATGCCGTGATTCAAGAGGGAAGAAGGTCTGTAGGTGTCGAGCGCAGGAAGGGAGGGAGAAGGTTG TCCAGAAATTCACCACCCTTGGCGAGTATAGGTACATCAAGGGTTGCTCCAGGTGATGCTAGTGTTGGTAATGATGGGGTAGCCGCAACTAGTGAACGTA GTAGCAGGAGTGGAGTGGGGAATGGGAGGAGAGTTGCGAGAGAAGATTCGGGTAGGAAGAGTGATAGGCCTGATTATATGGATGTAAGTCAAGCTGGCAA AAGTTTGGCTGAAGATGTTATTTCAAGGCACTCTGCATCAAGCAAACAGAGGGGGAAGAATGTTCAAGCAAAGACACTTTCTGAGCAGTTGAATGATTTT CCATTGGAAAGTGACGATTTGGCATCATCAAACATGCATGTTCGTGGAAAGTTTCCGAGACAGGAGAAAAATAGTGAGGAGGCAGAAACCAGCATCCGTG GTCATGGATGTGGAGTGAATAGGGGTAAGAGGCGGAAATTTCGAAGCACAAGAAGAACTCGAGTTGGTACAGCATCGAGAGATATTGGAGCCGAGAATGA ATTGTCTGTGGCTTCCAACTCATTGCCTAATGGTTCAGCTCACCAGAAGTATCACATGGAGAAGGCTGATGACTGCATAGATCAAAATGTTACTAGGGCT CCAAAAAATGGGTGTGGTATTCCTTGGAATTGGTCCAGAATTCATCATAGAGGTAAATCATTCCTTGACATAGCAGGAAGAAGTTTGACATCTTGTGGTT TATCTGACCCAAGGTTAAAGAAAGGGACATTAACCACCAGTGGAAAAAATATTCCGGAGCGACCTGTGGCATCTGAGTACTCAAGCTCATCTACAAAATC TGATGCAGAAGCACTGCCTTTACTTATTGAGGGATCTAGATCTCATGGAAGCACTGAAAATGTTTGTTGGGACCATGAATATTCTGGGGAACTAGCTCTT TTTGGTAATAATTTATTCAAGCATGATATCGATTCCGACCTTGCCTCTGAAGCTAGATCCGTTGACCAGCATAAGTTGAGAGGGGATAGTCATAGTAGAC ATCAAAGCTTAACACAAAAATATATGCCACGAACCTTCAGAGATATGGTTGGGCAGAATTTAGTGGCACAAGCTCTTTCAAATGCAGTGATGAGAAGGAG AGTCGGACTGTTGTATGTGTTTTATGGTCCCCATGGCACTGGAAAAACTTCATGTGCTCGCATATTTGCCAGAGCTTTGAATTGTAGTTCTTCAGAACAC CCAAAACCTTGTGGCTTTTGCAACTATTGCATTGCACATGACATGGGTAAGAGTAGAAATATAAGGGAAGTTGGTCCGGTCAGTAATTTTGACTTTGAGG GCATCATGAATCTACTTGACAATATAACCGTTTCCCAGCATCCATCGCAGTACAGAGTATTTATTTTTGATGAATGTGATACTCTGTCGGCTGATTGTTG GAATGCTATATCAAAGGTCATTGATCGAGCACCTAGACGCTTGGTTTTTATCCTTGTCAGTTCTAGTCTTGATGTCTTGCCTCATATAATAATATCCAGG TGTCAAAAATTCTTTTTCCCGAAGCTGAAGGACGCAGATATTATACATACATTGCAATGGGTTGCAACCAAAGAAGGTCTAGAAATTGATAAGGATGCCC TGAAACTCATTGCCTCAAGATCAGATGGATCATTGAGAGATGCTGAGATGACCCTTGAACAACTTAGTTTGCTTGGGCAGAGAATATCGGTTCCTCTTGT TCAAGAACTGGTAGGGCTTATCTCTGATGAGAAATTGGTTGATCTGCTTGATTTGGCATTATCTGCAGACACAGTCAACACTGTCAAAAATTTGAGAATG ATCATGGAAAGTGGTGTTGAGCCATTAACTTTAATGCCACAACTTGCTACAGTGATTACTGATATACTTGCTGGGACCTATGATTTCACAAAAGAAAGGC GAAGAAGGAAGTTCTTCAAGAGACAGCCATTGTCCAAAGAAGACATGGAAAAGCTTCGCCAGGCTCTGAAAACTTTATCTGAGGCTGAAAAGCAGTTGAG GATGTCGAATGACAAGCTAACATGGTTGACGGCTGCATTGCTTCAACTTGCTCCTGACCAGCAATATCTGTTGCCTACTTCATCTGATAATAGTTTCAAC CATAGTCCCTTGGCTATAAACAATGCTCATGTGAAAGAAGCAGCGAGAATAACTGGTAATCCTGTTGAAGCAAGACGATTATCAATGGATGATAGAATAG AAAATTTCCATGCCGAAAGCTCAGGTAATGGTGTGACAAAGGGTGTCAGTTCAGAGAAAAGAAGACATAGTGTGTCTGGTGTTGCTGCTCAACATACTTA TTCGCGTACCACCAATAATACTAGGATGAATGAAAGGCATATTTTAGGTAAAAACCATAAAGAAATTGAAGAGATATGGTTCGAGGTGCTTGACAAGATT GAAATTACTGGTCTGAAAGAGTTTCTGTACACAGAAGGCAAGCTGATCTCTGTTAGTTTTGGGGCAGCTCCAACTGTGCATCTAATGTTTAGTTCTCAAC TGACCAAATCTACTGCCGAGAAGTTCACAGGTCACATCTTACAAGCATTTGAATCGGTTCTTAGATCTTCCATAACGATAGAAATTAGATGTGAGACAAA CAAAGATGTGTGCGCGGTTCAGCAGTCTCCTATATTGTCTGGT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_68790; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_183516
| Blastp | Protein STICHEL-like 3 from Arabidopsis with 54.88% of identity |
|---|---|
| Blastx | Protein STICHEL-like 4 from Arabidopsis with 52.22% of identity |
| Eggnog | dna polymerase iii subunits gamma and tau(COG2812) |
| Kegg | Link to kegg annotations (AT4G18820) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019431591.1) |
| Pfam | DNA polymerase III, delta subunit (PF13177.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |