| Id Trinity | FTRINITY_DN57458_c0_g1_i9 |
|---|---|
| Name Transcript | Ll_transcript_183519 |
| Sequence | CACCGTTGAAGAGAGCAAATCCCCGTCCATTTACTAGACCTCTTGTAGTTACTCTCTTCATTGACAGTACATCCTATGTTCCCAGAATTGTTCGAGAGTT TGTCTAGAACAGCGACAGATCTTAGAACCATACACTCCCACACTGCACCTTCTCTGTCTCTCTCTCTTCTATGCTGTTATAAGTTCTAACCCCTCTGTTT CTCTCTCTTCTACTGATAACTATCGTTTTCTTTCTAAAGAGTGAGACCCTCGTGAAGTGCATGTGAAGCTTGCTCAGTGAGAGATCCACCACTTAATAAT TCATCCAAAAGGGTCACCTTCCCTTTTCTGATTCAGGTGATTTAAGTGCTTCCCTTCTACCTTTTCTCTTCTACTACTTTCTATTTCCACCCTTACTTTC CCTTTTACATCATCCTTTTTTTTTCAAACCAGTGAGGGGTTAGTACTTTGGTTCCACTTCAGATTTTTGAGATAATGGGGTCTTAACTTCTTCTCTTTTG TTTTCATTTCTAGTCTCAAAATTGTATCTTGTTGGGTCTATAGTTGCTTCTTGGGGTAGCAGCACTTTCTAGTTATGTGCACAAAGTTCATTCTTTTCAA TCTCAGTTTGGTGGGAAGTTTTGTTTTTAATGGCTTTTTCATCTTGAAGGGTGTTATAGCTTATTTAATGGGATAATTGACCATGAAACTCGTTATTTCC CTTTTTGCAAGTTGAATTCTAGCCTTACATTGTCATTTGCTAGTAATTAATGGGGGTTCAAGATTGAGCATTTTTCCCTTTACTGTCGTAATTGTTAAAA TTTGGCTAAGTTGTAGGCAAAAAAGTGCATTTTTCTGATTTGTTTCTTGAATTTAGAAGAGATTCTACTGTCAGAAGGGTTGATGTTGTGAACATGACTA GGGCTGTTCGCAATAGGGTACTGAAGGATGCCAATGGTGACATTAGTGACCATCTCCGCAATCATATCCATTTAACAAATTGCATTCACTTGAAGAACCA TATGCACAAGAACAGTCCCATACTAGCTGATAGGACACTCATGAGGGACCTTGTTGTGCTGCAGAGATCGCGCTCTCTCAGGGACCCTTCTGCGAGTCCT CCATCGTGGCATTCACCTTCAGTAGTTGATTTGCTTTTCAAGAGTGCTGAAAATGATGCCGTGATTCAAGAGGGAAGAAGGTCTGTAGGTGTCGAGCGCA GGAAGGGAGGGAGAAGGTTGTCCAGAAATTCACCACCCTTGGCGAGTATAGGTACATCAAGGGTTGCTCCAGGTGATGCTAGTGTTGGTAATGATGGGGT AGCCGCAACTAGTGAACGTAGTAGCAGGAGTGGAGTGGGGAATGGGAGGAGAGTTGCGAGAGAAGATTCGGGTAGGAAGAGTGATAGGCCTGATTATATG GATGTAAGTCAAGCTGGCAAAAGTTTGGCTGAAGATGTTATTTCAAGGCACTCTGCATCAAGCAAACAGAGGGGGAAGAATGTTCAAGCAAAGACACTTT CTGAGCAGTTGAATGATTTTCCATTGGAAAGTGACGATTTGGCATCATCAAACATGCATGTTCGTGGAAAGTTTCCGAGACAGGAGAAAAATAGTGAGGA GGCAGAAACCAGCATCCGTGGTCATGGATGTGGAGTGAATAGGGGTAAGAGGCGGAAATTTCGAAGCACAAGAAGAACTCGAGTTGGTACAGCATCGAGA GATATTGGAGCCGAGAATGAATTGTCTGTGGCTTCCAACTCATTGCCTAATGGTTCAGCTCACCAGAAGTATCACATGGAGAAGGCTGATGACTGCATAG ATCAAAATGTTACTAGGGCTCCAAAAAATGGGTGTGGTATTCCTTGGAATTGGTCCAGAATTCATCATAGAGGTAAATCATTCCTTGACATAGCAGGAAG AAGTTTGACATCTTGTGGTTTATCTGACCCAAGGTTAAAGAAAGGGACATTAACCACCAGTGGAAAAAATATTCCGGAGCGACCTGTGGCATCTGAGTAC TCAAGCTCATCTACAAAATCTGATGCAGAAGCACTGCCTTTACTTATTGAGGGATCTAGATCTCATGGAAGCACTGAAAATGTTTGTTGGGACCATGAAT ATTCTGGGGAACTAGCTCTTTTTGGTAATAATTTATTCAAGCATGATATCGATTCCGACCTTGCCTCTGAAGCTAGATCCGTTGACCAGCATAAGTTGAG AGGGGATAGTCATAGTAGACATCAAAGCTTAACACAAAAATATATGCCACGAACCTTCAGAGATATGGTTGGGCAGAATTTAGTGGCACAAGCTCTTTCA AATGCAGTGATGAGAAGGAGAGTCGGACTGTTGTATGTGTTTTATGGTCCCCATGGCACTGGAAAAACTTCATGTGCTCGCATATTTGCCAGAGCTTTGA ATTGTAGTTCTTCAGAACACCCAAAACCTTGTGGCTTTTGCAACTATTGCATTGCACATGACATGGGTAAGAGTAGAAATATAAGGGAAGTTGGTCCGGT CAGTAATTTTGACTTTGAGGGCATCATGAATCTACTTGACAATATAACCGTTTCCCAGCATCCATCGCAGTACAGAGTATTTATTTTTGATGAATGTGAT ACTCTGTCGGCTGATTGTTGGAATGCTATATCAAAGGTCATTGATCGAGCACCTAGACGCTTGGTTTTTATCCTTGTCAGTTCTAGTCTTGATGTCTTGC CTCATATAATAATATCCAGGTGTCAAAAATTCTTTTTCCCGAAGCTGAAGGACGCAGATATTATACATACATTGCAATGGGTTGCAACCAAAGAAGGTCT AGAAATTGATAAGGATGCCCTGAAACTCATTGCCTCAAGATCAGATGGATCATTGAGAGATGCTGAGATGACCCTTGAACAACTTAGTTTGCTTGGGCAG AGAATATCGGTTCCTCTTGTTCAAGAACTGGTAGGGCTTATCTCTGATGAGAAATTGGTTGATCTGCTTGATTTGGCATTATCTGCAGACACAGTCAACA CTGTCAAAAATTTGAGAATGATCATGGAAAGTGGTGTTGAGCCATTAACTTTAATGCCACAACTTGCTACAGTGATTACTGATATACTTGCTGGGACCTA TGATTTCACAAAAGAAAGGCGAAGAAGGAAGTTCTTCAAGAGACAGCCATGTGAGTTAAAAAAATCTTTTTTATGGTTTACATTGCAGTTATCAAATTAT TGCAAACCGAGATGACAAGATCATACTATTTCTCTGATCCGAGGCAACTATAAATACTTAATGATGTACCTTTTCTAATCCCCGTCATTCTTTAAACACC ATTTCCATCT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_68790; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_183519
| Blastp | Protein STICHEL-like 3 from Arabidopsis with 60.89% of identity |
|---|---|
| Blastx | Protein STICHEL-like 3 from Arabidopsis with 59.19% of identity |
| Eggnog | dna polymerase iii subunits gamma and tau(COG2812) |
| Kegg | Link to kegg annotations (AT4G18820) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019431591.1) |
| Pfam | Holliday junction DNA helicase ruvB N-terminus (PF05496.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |