| Id Trinity | FTRINITY_DN57461_c2_g1_i12 |
|---|---|
| Name Transcript | Ll_transcript_185874 |
| Sequence | GTTTGTTTCTGTAATCACTTAACACATCAACTTCTGTATTATTCAACATCATTCTCTTTCTCTCTCCTCTCTACAAAGAAATTTCTTCTATGAACAGAAT CTAGGGTTTTTTATGGAACACTGAATCTTCATCACAGCACAAGAATCTCTCACTCCTTTCATCCCCACGTGAAGTTTAGGAGAGATTGTGATAATTCTCA CTTCCGTTAGGTTAGAAGGGGAAAGCAAATCTTCTGGTGGTATGGCAACTGAGAGTCCAATTAGAATCTCTGAAGCTGGAGGTAAATGATCCTCTCTTAA AGAAGCTGCAACTTTTGGTCAACCATCTCATAACATGGCAACAGAAGATTTGGGTATACTTTTGAAGGGCCATAAGTTCCATGGCACTGGAAAGGTTGTA GCACCCAATCGCAGTGGCAGCGCACCTCCCAGCATGGAAGGCTCGTTTCATGCTATAGAAAACCTGTTATCCCAGCAGAGCTCCACCCAGAATGCAAGCC TTGCAACTCTAAACAGAGCTATGCAAAAATGTGAGTCTGAAGAAGAATTACGAGCTGATCCGGCTTATTTGGCATACTACAGTTCTCATGTCAACCTAAA CCCTAGACTTCCTCCCCCACTAATCTCCCGGGAAAATCGCCATATACGACATCATAATAGTGGTTTTAGCAATAATTGGGGATTGTCTTTTGCAGATGAT AGCAAAAGTTCTTTGCAATTGTCCCAATGGACTCTTGCAACGCACAAGGAGGAGTCTGATGATGATTCACTCCAACAGCCATATGATAATGAGTTAGTTA AGACAAGTGAAATGTGGCGTAGGCCGGATGCAGCTTCATCAACATCTCAGCACAAAAATGTGGTTGATTTAATTCAGGAAGATTTCCCACGAACAATGTC ACCTGTATATAATAAGTCTTTTTCTGTAAGTCATGCACTGGTGGATGAACCGATTGGCTCAGATTCTGGTTCCACTTCTTCTCATGACCCTCCTGTCAGT ACAGCCGAGGCTGCTAAATCTGCCGGAGGTTCAGATGATACAAGGGTTTCATCAACTGTTGATTCCCATGCCCCAGTTGCAAGCTCATTATCTATTGAAT CCACAGGCAGCGTAGGTTTTAGTGACATAGATGTTACAACTGTTGAGTCTCAGCTAAAGGCTCTTAGCATATCTAATCTACCAAATTCAAAAAGCCCGAG TAATGAAGAAAAATGGAAGACCAACTATCAGAATAATTTGATGCAACACCAGATATACCAGCAACAAAACAATCCATATGAAGTTCATAATGCCAGTTCT CAAAGTGTAAATTATGCCTATATTGGTAGGGAACAGTTTCCTCATAATTCCAGCAAGTTCTCTGATGTCCAACCAGTACTTCAGTCATCCGGGTTTACAC CCCCACTATATGCCACGGCAGCTTATATGACCTCAGCAAATCCGTACTACATGAATTTTCAGGCCTCGGGCATATATACTCCACAATATGTTGGTGGATA CACCTTAAATCCCACAGCTATTCCTTCATATATTACTGCATATCCGCCTCAGAGTGCGGTGCCACTTGTTGATGGGGCCACTAGTTCCAGTTATACTCCA CTACCACCCGGGGTTTCATCCGGGGGAAGCATTTCTCATGGAGCTGAAATGGTACATGCAAACAAGTTCCCTGGGCAATTTGGATTTCCTCTGCAGTCTT CTTTCGGTGATCCTTTTTACATGCAATATCATCAGCAGCCTTTTGTGGAGGGGTATGGTATTTCAGGGCATTTTGATCCCCTGGCACCTAGACCAAGTGG TGGTAGCCAAATTAGTCCTTTTGATTCGCAAGAAATGGCCAGTACAGGTGCTTATTTGGATGATAAAATATTGCATGACCAGAGAACCATTGCTAATATG AACGTAAGAAAACGAGGATTTACTATTCCTAGTTATTATGGAAACTCGCCAAGCATGGGTTTGGTAATGCAGTATCCAAGTTCACCACTTCCTAGTCCAG TTCTGTCAGGATATCCAGAAGGAAGTTCTGGCCTTCCTGAAGGAAGGAGTGACATGAAACTTTCCCCAGCTTCTAGTAGAAATACAGGTGTATTATCTGG ATGGCAAGCGCAGAGATACTTTGACAGTACTCATGACCCGAAAATTGTTAATTTTCTTGAGGAGTTAAAATCTGGCAAAGGTCGAAGATTTGAGCTATCT GATATTATTGGACATATTGTTGAATTTAGTGCTGATCAGCATGGTAGTCGATTTATACAGCAAAAGTTGGAATGTTGTGGTGTTGAAGAGAAGGCATTGG TGTTCAAAGAAGTTCTTCCACATACTTCAAAATTAATGACTGATGTATTTGGTAACTACGTAATACAAAAGGTGTGATTTTGAAGTGATGTACATTGCCG TCAAATTTTAGAGTAACTTATGGTTATCTGGAATCTATTTTGGTCTACATTGTTGTTTTCTCCTGCTGTAGTTTTTCGAGTATGGAAGCCCTGGGCAGAG GAGGGAGCTTGCAAATCGGTTGGCTGGTCAGATACTTCCTTTAAGTCTGCAGATGTATGGC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_68803; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_185874
| Blastp | Pumilio homolog 5 from Arabidopsis with 37.71% of identity |
|---|---|
| Blastx | Pumilio homolog 6, chloroplastic from Arabidopsis with 38.35% of identity |
| Eggnog | pumilio homolog(COG5099) |
| Kegg | Link to kegg annotations (AT3G20250) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019431512.1) |
| Pfam | Pumilio-family RNA binding repeat (PF00806.18) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |