| Id Trinity | FTRINITY_DN57461_c2_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_185867 |
| Sequence | CTGTCTTATTTCAAACCATGTATTATACCTCAAGAAGGTGGAGTTGCTTCTGGTTTTAAACATGCTGTGCCTGAGAAACATAATACGCGGTTGTTTGTAT GCAGAGGGAAACATGTTGTACATGTCAAAGAGGCAAGTTTGACATTATTAATCTGTCCTTGAGGTTCCCTTTGCTCGATCTTCACTCAGCCATGATGATA TTTATGTTGCTTCTGGTTTTAAACATGCTGTGCCTGAAAGACATAATACACGGCTGTTTGTATGCAGAGGGAACAGTTAGTTTATTTATTTATCAATTTT TCCTCCAGGGTAAAGCTGTGATTGCAAATGCATAATTCTTGTTTGTTTAAAATTTTAATTGCAGGAAGATTTTCCCCGTACAGTGTCCCCGGTATATAAT AAATCTCTTTCCATAAGTCGCGGACTCGTGGATGAACCAATTGACTTAGGTGCTGGTTCCACTTCTTCTCATGATCCTCCTGTCACTACAGCAGAGGCTG CTAAACCTGCTGGAGGTGCAGATGAAAGAAGTGTTTTACCAACTGTTGATTCTCATGCCCCTGTTGCAAGCTCATCATCTATTGAATCCACAGGCAGCGT GGGTTTTAGTGACATAGATGTTACGGCTGTTGAGTCTCAGCTAAAGGCTCTTAGTGTATCTAATATACCAAATTTAGAAAGCATGAGTAATGAAGAAAAA TGGAAGACCAGCTACCAGAGTAATTTGATGCAACACCAGAAATACCACCAACAAAACAATAAATATGAAACACCTGACGCCAATTCTCAAAGTGTAAATT CTGCCTATGTTGGTAGGGAACAGTTTCCTCGTAATTCCAGCAAGTTCTCTGATGTCCAACCAGTGCTGCAGTCATCTGGGATTACACCTCCACTATATGC CACTGCGGCTTATATGACCTCAGCAAATCCATACTATGCTAATTTGCATGCCTCGGGCATATATACTCCACAATATGTTGGTGGATACACCTTAAATCCC ACAGCTATTCCTTCATATATTACTGCATATCCGCCTCATGGTGCCGTACCACTTGCTGTCGATGGGGCTGCTAGTTCTAGTTATACTCCCCTACCACCAG GGGTTTCAACCAGGGGAAGCGTTTCATATGGAGCTGAAATGGTACACGCAAACAAGTTCCCTGGACACTTTGGATTTCCTATGCAGCCTTCTTTTGGTGA TCCTTTTTACATGCAATGTCATCAGCAACCTTTTGTGGAGGGGTATGGTATTCCTGGTCGTTTTGATCCACTGGCACCTAGACCAAGTGGTGGTAGCCAA ATTAGTCCCTTTGATTCGCAGAAAAGTCCCAGTACTGGTGCTTATTCGGATGATAAAATATTGCATGATCAGAGAGCCAGTATTAATATGAATTCAAGAA GAGGAGGATTAACAATTCCTAGTTATCATGGACACCCGCCAAACATGGGTTTTGTAATGCAGTATCCAAGTTCACCACGTCCTAGTCCACGTCTGTCAGG ATACCCAGAAGCAAGTCCCGCCCTTCAAGGACGGAGGAGTGAAATGAAACCTTTGCCAGCTTCTGGTAGAAATATAGGTGTATTAATTGGATGGCAAGGC CAGAGATACCTTGACAGTACTCGTGACCCCAAAATTGTTAATTTTCTCGAGGAATTAAAATCTGGCAAAGGTCGCAGATTTGAGCTATCTGATATTATTG GTCATATTGTTGAATTTAGCGCTGATCAGCACGGTAGTCGATTTATACAGCAAAAGTTGGAATGTTGTGGTGTTGAAGAGAAGGCATTGGTGTTCAAAGA AGTTCTCCCACATGCTTCAAAATTAATTACTGATGTATTTGGTAATTATGTAATACAGAAGTTTTTTGAGTATGGAAGCCCTGAGCAGAGGAGAGAACTT GCAAATCAGTTGGCTGGTCAGATACTTACTTTAAGTCTGCAGATGTATGGCTGTCGTGTAATCCAAAAGGCACTTGAGGTTATTGAGCTTGAACAGAAAG CTCAGCTTGTTCGTGAGCTAGATGGAAATGTAATGAAATGCGTTCGTGACCAAAATGGGAATCATGTAATACAGAAGTGTATTGAATCTATTCCAACCAA ACAAATTGGCTTCATAATATCTGCATTTCGTGGTCAAGTTTCTAATTTATCAATGCATCCTTATGGTTGCCGAGTCATACAGAGAGTTCTAGAGCATTGC ACAGACGAGGTTCAATGTCAGTTTATTGTGGATGAGATATTGGAGTCAGTTTGTTCTCTTGCTCAGGACCAATACGGTAATTATGTTACCCAGCACGTGT TGGAGAGAGGAAATCATCAGGAAAGGAGCCAAATCATTAGCAAGCTGTCAGGACATGTTGTTCAGTTAAGTCAGCATAAATTTGCGTCAAATGTTGTCGA GAAATGTTTGGAGTATGGTGATGTCAATGAACGGGAGCTGTTGATTGCAGAGATTGTTGGGCAAGATGAACAGGACGATAATTTATTGACAATGATGAAA GACCAATTTGCAAATTATGTGGTCCAGAAGGTTTTCGAT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_68803; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_185867
| Blastp | Pumilio homolog 6, chloroplastic from Arabidopsis with 54.69% of identity |
|---|---|
| Blastx | Pumilio homolog 6, chloroplastic from Arabidopsis with 52.76% of identity |
| Eggnog | pumilio homolog(COG5099) |
| Kegg | Link to kegg annotations (AT4G25880) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019439368.1) |
| Pfam | Nucleic acid binding protein NABP (PF07990.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |