Ll_transcript_185871

• Id Trinity: FTRINITY_DN57461_c2_g1_i9
• Name Transcript: Ll_transcript_185871
• Sequence: TTATAGACTCAGATTTTTATTTAAAAAAATAATCTCAGCTTGTTTCTAAATACACTGCACTTTCATTTTACACACAACAAACAAAATCACTTAACAAATC AGCTTCTGTATCCTTCAGCATCATCCTCTTTCTCTCTCTACAAAAAATTCTCTCTTTTGCACAGAATCTAGGGTTTTTGAACAGTGAATCTTCACCATCA CTAAAGAATCTATCACCCCTTTCTGCTCCACATCAAGTTTAGGAGAGAATGTGATTTATCTCACTTCCATTGCAAAAAAGGGGCAAACTAATCTTCCAGT GGCATGGCAACTGAGAGTCCAATTAGAATCTCAAAAACTAGTGGTAAATGGCCCTCTCTTACGCAAGCTGCAACTTACGGTCCACCATCTCATAATATGG CGACAGAGGATTTGGGTGTACTTTTGAAGGGCCCTAGGTTCCGCGGCAGTGGAAAGATCGTGGCACCAAATCGCAGCGGCAGTGCACCTCCTAGCATGGA AGGCTCATTTCATGCCATAGAAAACCTGTTATCCCAGCAGAACACCACCCAGAATGCAAGCCTTGCAACTCTAAACAAAGCTATGCAGAAATGTGAGTCT GAAGAACAATTACGAGCTGATCCAGCTTATTTGGCATATTACAGTTCTCATGTCAACCTAAACCCTAGACTTCCTCCCCCACTAATCTCCCGGGAAAATC GTCATATGGGACATCATATTAGTAGTTTTAACAATAATTGGGGATCACCTTTTGCAGATGATAGCAGTAGAAGTTCTACACATTTGTCCCAATGGACTCT TGCAACACACAAGGAGGAGTCTGAGGATGAATCACCCCAACAGCCATATGATAATGAGTCAGTTAAGACAAGTGACATATGGCCTAGACCGGATGAAGCT TCATCGGCATCTCAGCACAAAAATGTGGTTGATTTAATTCAGGAAGATTTTCCCCGTACAGTGTCCCCGGTATATAATAAGTCTCTTTCCATAAGTCGCG GACTCGTGGATGAACCAATTGACTTAGGTGCTGGTTCCACTTCTTCTCATGATCCTCCTGTCACTACAGCAGAGGCTGCTAAACCTGCTGGAGGTGCAGA TGAAAGAAGTGTTTTACCAACTGTTGATTCTCATGCCCCTGTTGCAAGCTCATCATCTATTGAATCCACAGGCAGCGTGGGTTTTAGTGACATAGATGTT ACGGCTGTTGAGTCTCAGCTAAAGGCTCTTAGTGTATCTAATATACCAAATTTAGAAAGCATGAGTAATGAAGAAAAATGGAAGACCAGCTACCAGAGTA ATTTGATGCAACACCAGAAATACCACCAACAAAACAATAAATATGAAACACCTGACGCCAATTCTCAAAGTGTAAATTCTGCCTATGTTGGTAGGGAACA GTTTCCTCGTAATTCCAGCAAGTTCTCTGATGTCCAACCAGTGCTGCAGTCATCTGGGATTACACCTCCACTATATGCCACTGCGGCTTATATGACCTCA GCAAATCCATACTATGCTAATTTGCATGCCTCGGGCATATATACTCCACAATATGTTGGTGGATACACCTTAAATCCCACAGCTATTCCTTCATATATTA CTGCATATCCGCCTCATGGTGCCGTACCACTTGCTGTCGATGGGGCTGCTAGTTCTAGTTATACTCCCCTACCACCAGGGGTTTCAACCAGGGGAAGCGT TTCATATGGAGCTGAAATGGTACACGCAAACAAGTTCCCTGGACACTTTGGATTTCCTATGCAGCCTTCTTTTGGTGATCCTTTTTACATGCAATGTCAT CAGCAACCTTTTGTGGAGGGGTATGGTATTCCTGGTCGTTTTGATCCACTGGCACCTAGACCAAGTGGTGGTAGCCAAATTAGTCCCTTTGATTCGCAGA AAAGTCCCAGTACTGGTGCTTATTCGGATGATAAAATATTGCATGATCAGAGAGCCAGTATTAATATGAATTCAAGAAGAGGAGGATTAACAATTCCTAG TTATCATGGACACCCGCCAAACATGGGTTTTGTAATGCAGTATCCAAGTTCACCACGTCCTAGTCCACGTCTGTCAGGATACCCAGAAGCAAGTCCCGCC CTTCAAGGACGGAGGAGTGAAATGAAACCTTTGCCAGCTTCTGGTAGAAATATAGGTGTATTAATTGGATGGCAAGGCCAGAGATACCTTGACAGTACTC GTGACCCCAAAATTGTTAATTTTCTCGAGGAATTAAAATCTGGCAAAGGTCGCAGATTTGAGCTATCTGATATTATTGGTCATATTGTTGAATTTAGCGC TGATCAGCACGGTAGTCGATTTATACAGCAAAAGTTGGAATGTTGTGGTGTTGAAGAGAAGGCATTGGTGTTCAAAGAAGTTCTCCCACATGCTTCAAAA TTAATTACTGATGTATTTGGTAATTATGTAATACAGAAGTTTTTTGAGTATGGAAGCCCTGAGCAGAGGAGAGAACTTGCAAATCAGTTGGCTGGTCAGA TACTTACTTTAAGTCTGCAGATGTATGGCTGTCGTGTAATCCAAAAGGCACTTGAGGTTATTGAGCTTGAACAGAAAGCTCAGCTTGTTCGTGAGCTAGA TGGAAATGTAATGAAATGCGTTCGTGACCAAAATGGGAATCATGTAATACAGAAGTGTATTGAATCTATTCCAACCAAACAAATTGGCTTCATAATATCT GCATTTCGTGGTCAAGTTGCTAATTTATCAATGCATCCTTACGGTTGCCGAGTCATTCAGGTAAGGTTATTGAATTCTCTTTCCTATGAAATGGCATTTT GTCTGGTCATGAATTCAGTCCTATGTTGATGTTTCTTGTAGAGAGTTCTAGAGCATTGTACAGATGAGGTTGAATGCCAATTTATTGTGGATGAGATATT GGAGTCAGTTTGTTCTCTTGCTCAGAACCAGTATGGTAATTATGTTACCCAGCATGTATTGGAGAGTGGAAACCGTCAGGAACGAAGCCAAATTATTAGT AAGTTGTCAGAACATGTTGTTCAATTAAGTCAGCATAAATTTGCTTCAAATGTTGTCGAGAAATGTTTGGAGTATGGTGATG
• Tissue: flowers
• Gene name: LI_gene_68803;
• Additional information: details;

Expression of Ll_transcript_185871

FPKM

• FPAB: 7.6
• FPNAB: 2.9
• LF1: 4.8
• LF2: 4
• LF3: 5.6
• LF4: 3.2
• UF1: 2.3
• UF2: 4.7
• UF3: 7.1
• UF4: 3.7

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_185871

• Blastp: Pumilio homolog 5 from Arabidopsis with 40.89% of identity
• Blastx: Pumilio homolog 5 from Arabidopsis with 41.63% of identity
• Eggnog: pumilio homolog(COG5099)
• Kegg: Link to kegg annotations (AT3G20250)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019439368.1)
• Pfam: Pumilio-family RNA binding repeat (PF00806.18)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;