| Id Trinity | FTRINITY_DN57471_c1_g1_i8 |
|---|---|
| Name Transcript | Ll_transcript_185171 |
| Sequence | ATTGTTTCCACCATGATAGTTACTAGTTATGCACTAGAATACCAATTAGGGCTCGCCAAAAACAATGTGGACTCTTTTATGTGATATATTGAGATGGATG AGCCCAACAAATTCAAACCCTATTTGTATGGATTTTATTTTGGCAGAGATTGGTCCACTTAAGTTAACGCTGATTGATGGAAAATGGGAATATGCCATTT TAGAAATGCGTTTTGTTCTCCAGATTCGTCAAAAATAGTAACAATTTAGTAAAATTTAGTCAATTTGTAACTGTCTTCATCTAATCTCATTCTTTCCTAT CTATAAATAACAAAAACAAAAACAAAAAAGGAGTCATTTGCAATTTGCAGCAACAACCGCAAATCGCAAACTCTCTTTACACCCTTCAACAATGTCTCTT CCTTCTTTCTCATCGCTGCTATTGCTATCTCTCGTGTTAGCTATGGTTGCGTTCGTTTCTTCAATCGAAGAGTTCGATTTGGATTTGGAAAGAAGAGTAC ATACACAGAGAGAGTTTGATTATTTCACTTTGGGGTTGCAATGGCCTGGTACTTTCTGCCAACGCTCACAATATTGCTGTTCCTCTAATGCTTGTTGCAG AGGCTCCAATGCTCCAACAACATTCACCATACGTGAGTATCACTTTTAAAATATGACGTTGCTGTTTCGAATGTAGACCATATGGAATAGTAGGTAGCAT AGTGCTATAAAGGATAAACTCTCACTATGTGCATTGTGTAGGGAAGGGTTGGACCCATTTTATGGCTCTGTATTAGGCAGCCTTACCTTTTGTTGATACG AGATTGAGTTCACCTATGATCTCATTGACTTGTGGATTGTATAGCGACCACTCCCATCTGTTGCACAAAGACCATTATGGGGTCTAGAAAAATTCTTAAA ATATGCCAGTGTTTCAAACCATTGAGAAATTAATTTGATGTGTGCCTTTTTCCCTTGGTCAATCCTTTTCTCACTCATTTCTTCTGGATCTCACCTTTTG TGTTTACATTGTTTTTATTTTAAAAATTAGCAGAGGTAAGAAGTATTTTGACCTTTTACATTTCTATTCTGAGTGTGGAGATCCTTGCAAGAGAAACTTA ACGACATCATATCTACTTTATGATAGATGGACTCTGGCCTGATTATAACAATGGAACCTGGCCAGCGTGTTGCACTAAATCTTCTTTCGATCCAAATGCG ATATCAACATTGACTGATGCTTTAGAGCAATATTGGCCATCATTAAGCTGTAGGGAAGCACCATCATGCCATGGTGGGAAAGGTTCATTTTGGGGTCATG AGGGGCTACCACATCGGTTCGCATTTGCAGTGGGAGAAGCATGGGACATGCGCATCACCTGTGGTTAGCAACGAATATGATTATTTCCTGACAGCGCTGA ACGTCTATTTCAAATATAATGTCACAAAAGTTTTAAATGAAGCTGGATATGTTCCATCTAACTCAGAAAAGTATCCCATCGGAGGCATTATTTCTGCCAT TGAGAATGCTTTTCATGCATCTCCTCAAATTGTTTGCTCAAGAGGTGCTGTGGAGGAACTTCGTCTGTGCTTTTATAAGGACTTCACGGTTGGAAATCTA CCTTTGCTCTGTAATATATTCAGCATATAAGAAACTAAAAGACGCTGTCCAAACATTTGCTTTATTCACCATTGAGATTTAGATACCAATTAGTGTTGTT AAGGACTAAATAATTTAGTCTGTGGTAATTGGTATTTTCAACTACTGATATGATTATTGTTCTTCCTGTTCAGATTTAAGGCATTACTGAAAAAGATTCA TGAGTTATACTTGTGAGATAACTAAGCTGTTTTGTACTTGTAGGATAGTGCCATTTAATTCGAAACTTATAAATTCTGTGCAAATTTGGTTTAATTTTAG AAAATGAAGGAAAAGCCACACTGTACTGTAGAATGTATTACTGATTATGATAGAATCTCCATGACCTTGTACTCTGCAGGGTACTCTATTCAAACCCAAT ATTTTGGCAAGCATAATTATTTTAGCACATTGTCCTTTTTTTGCAGCCACGAGATTGTGCTGTTGGACCTGACAATAAAATTGACATCGTCGCTTCAAAA GGATCATGTCCCCAATATGTTAGCTTGCCGGAACTTGCATCGCCAGGTTAGTTCACTGTTGTTCTATCTTTACACCAGTATAGCTATATTTCTATTTCGT AATATTATAGTAGATTGCTAAAAGTTACACATAAGTGGTCTTGTTGGATTAACATTGAAGGAAGAAACTGGTCTGGGGTCAATTCCAGACCCACTAAGAT TTACAAATGATGTGTGCCTGGTCAAAATCCTGTTGTACGTTGTGAGTATATCTGAAGCTAGTTTACCTGAGGCCACATAGAGGCACCAAGTTGGTTCAAA TACCTATTTCACTATTAATACTTGGTTCAACACCACGTGCGGGGATTGATTTATCTGTATCCCTATTTTTCAAATCGATTTATTCGTGTCGCCAGTAATG ACATTTATACTTCAACATGCTGATTCTGACTTGACTTATATACATGATTCTTTGTCATTTTCATCATTTGAACAATAAGCTTTATATCATTTTGTCACAA GCATTCTAGGCATCTGTATCACTGAGAAAGAGTCAAAGAATAATTTTCCTTTTCCTGACAGAAGAAATTCATAAGATAAAAAAGATGCACAATTGTGAAT ATGATAAGAAATTTACCATATAAGACTACAACAACAAAACCTAAATTTAGGGGTGTGGGTGGGGACTAAGTATTAAGCAACTCTTCCCAATCTTTGGAAA CCCAAGAGCATAACACCATTCCAGCAGTCATGATTTGAGCATAACACCAGAGTCCAAAAACTATCTTGGGGCAAAGAAATCTTTTTAAAGATATGATTGT TTCTCTCTAACTATACCATGGTCCTTGCCCTCTCTCCTAGAGCACCTGGCAGAAAAAGTCCAAATTGTGCACTGAGGTTTGTACCTGTGATCTTTGCAAA TGACTTTTAGCTGCAACATTGAGTATTGTGAAAGTTACTTGAGTTTGGTACACACGTACAAGATTGTAACTGGCATCACGTGTTACTCATCTGAGTTTCA TGCCTTATGTTTTGCGTCATTTGATACCTTTCATAACATGTGGAAGAGTATCTAGAAATTGAAAATTGGATATTTTAAATTTGCTCAGTGGCTGCTAAAC ATGGGCATAATACATGCTTAGAAGAATATGGTACAGACAATGTGTGTTCCAAACACGAAAATCGTAAATATCCATGCATCTTTTAGTTTTCTAGGATTCA AAGATGGTGTTTATTGTATGACTTAGCCGCTGTTGACTTGGCTTCAGCTCTGGTAGTCCATAATTCGGTAATCTAGTGCTATTTTATGGCTGTCTAATTT ATCATGGCCAATTGTTAAGTTTTCGCTTAGTTGATGCGTTGATAGAACTTCCCTTTGATTTAGAACAAAATATGTAATGTGATAGATTACTCTTTCCCGA AAAATTTGTTGATCTGTTGAGAGTAGCCCAACATTGTGTAAGACAATTATCAACTGCATTTTATTAATATTATACAAATCTTTGCATCTGTAGGACGTGA TGAACTTCAAAGTTGGGTGTCTGATGAAGCGGCTCTTTAAGGTTATGGTAGAGTGCTTCTATTTGTAGTTTTCTGTAACTTGAGAATGGACAGCCACATT CATTAATAGGTTTAGTTGTTGTACCATTTATCAATTTGGAGAGGAATGGATTTATTGAAGAGTTGGACATTTGGGTTGAGACCCATGCCAGCTATAAACC AAGTTCCAAAATTGAAGACATGGATAAATGTATTATTATGCATCTACTTCAATTTTTGAGCCTGCTTCCATGTTAATGGGGCTGGGACTTTATCTGTTTC TTGGTTATTGAAAGAATACAAGTTTAATAAAGCGTGTTGTTTTATCATAAGAAATTGAGGATAATATATATTATCCTCATGTATTTTTTATTATACATCT CTGTTTCTTTAAAAGCATTTACATTTTCCTTGGATCACAAATGAGGTCAAGCACAAGCACAAGTACAAGATGCACTATGACTACAACATACGAAAAATCT CCCTTTGTCAATCATGTACATGGTGTAATTTCTTTTCTCCCTTTTTCAGTTTAAATAAGAATAGTAAGATTTCTAAACATCTCTAATTAAATATAATATT TTCCACATTTTCCAAACAGAAAATCTTCCACACCAATAATAGAGACATAGATGAAGGCTTGTCTAATCTCTACCGCTAACCTTCATGATTTCTTTTCTTG CTTACAAGGCCACAAGCTGACTCTTGTGTAACAGCAAAATATACCTTAAGGTTCCTACACCTTTTGCTACAACCAACCTTCACTGCCCTTCTGTATGGGA TGCTGGACGTTTCATCCTCAGAGTAGGTGCACCATTTATTTAACTTCATCACTATATATGTACATATTCCAATATCACATCATGCATACCAATCATCTTT CTACACGCTTAAGTTCTGCAAATGTTCAAACCTCTGCAAACATTTGTAGCTACATACCCTCAACCCCGAACACATTCTTCTACAGCTATGGGTTCAAGTG CCATAGTGGGTTCTATTCAGTCGATCGAATACTCAAGGGACTAACAGCATTTAGGTGATGTGAAGTACTGTCTCTCGTGTCAGCACTTAATCAAGAGAAG TAAATGGAAAGGGTTCAAACAAAAATTGAATATAAAACGGACCCAGGTAGGGATGGCAATGGGTACCCGGATCCGTGGGTACACGCAAAAAATATCTGTA ATAGGTC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_68887; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_185171
| Blastp | Ribonuclease 2 from Arabidopsis with 67.44% of identity |
|---|---|
| Blastx | Ribonuclease 2 from Arabidopsis with 56.88% of identity |
| Eggnog | ribonuclease T2 activity(ENOG4111M7G) |
| Kegg | Link to kegg annotations (AT2G39780) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019460218.1) |
| Pfam | Ribonuclease T2 family (PF00445.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |