| Id Trinity | FTRINITY_DN57485_c0_g1_i12 |
|---|---|
| Name Transcript | Ll_transcript_186027 |
| Sequence | GGTTAAGTCCAGCTTGTCGATTTAATTTTGGGGAATTTGAGAAGCATAAGTCTACAATATCTGGCCTTTTGGATGTCATTGAAAGGTATTCTTATGGAGA TAATGATTTGAATACTAAGTTGACAAGCAAGATGAGGATATTTAAAGATTTTGAGTTAGATTTTGGAAGACAAGTTGCTATTCGTGAAATAAATACAGTG AGACCAGATCAATGGTGGGAATCTTATAGATGAGGTGTACCAAATCTCCAACAATTGGCGATCCGTACTTTAAGTCAAACATGTAGTGCTTCTGATTGTG AATGAAATTGGAGTGTATTTGAACATATTCACTCAAAGAAAAGAAATAGATTAGAACATCAAAAGTTAAATGATCTTGTTTATGTTCGTTACAACTTGCG TCTACAACAAAGGAACCGACGAAGATATCAAAGTTTTGACCCCATCAATTTTGAAATAGTTGATGACCATTCTAATTGGGTAATGGAGGAGTCACCACCT TTCTTGACCATTGAAGAGGTTGATGCACTCCGTAATGATCTTGCTAATATGACAATTGAACCAATTTCAGATGATATTGAAACCCAGACACCCATTTCTC CAATGACCGGAGCAGCAGCATGAGAGCATCACGAAAACACTGCAACTCAGATCACTGAATAGTCAAAATAAAAAATGCACGGTCGTCCTCGCAAACCGTT GAAGCCAGAAGATACAACAGCTTTATCAGCCAAAGCCGAAAAGCTTCGTTCACTTCAATCTCAATTCCTCACCAATCATCACAATCACATGTTACTTCTC TCTTTCTTCCCTCATCATTATTATTACTATTACTTTATCGCATTATCATTTCCATTTCCATTTCCATTTTTAGTTACACAAAGGAAGCTCTAGATTTGAA TGCCAAGTTAGTTGAGAACAATCCAGAGTGGCACACTGCTTGGAAGTACAGAAAACTCGTTGTAGAGAGCTTCCTCTCTCGTTTGGAATCTGATCCTGAT TATGTCAAATCAATTCTCGATGAAGAACTCAGAGTGGTAACTTTTCTATTAGGTTTCAGTTAATTCAAATTATAATTACAAGGTGAAGGGATCAATAACC GTACCTTATTCGAATGATTAATTGGTCTTTCTTACTAATTTTATATTGTTAGCTTTCCATTCATTTTAATATCCATAAACAAGTTTTCTTCTGTTTAGTG AAAGAAATTTTACCAATGGTGAGAGCTTTACTTGAGATCCTGAGTTCGAGTATTGCAAATGAAAAAAAAAACATTTGCTGATAGAACTTTATCCCATAAT GGTTCTTTCCGACTCAACTCATAGTATTATAAATTTGATACGATTTCCTAGCACCGAGGGTCTTAGATAAAAATAAAATATTCTGGATTATGGAAATTAC AGATGGCTTATTTATTTATTTATATAGTTTTATGTAAGAGTTTAGTAAGGAAGTGTGTAATGTGGAGTTGAGGTTATATAATTTTGAATTGATGTTGTGA GGTAGAGTATGCATTGAGGAAGAATTCTAAATCATATGGTGCATGGCATCATCAAAAATGGGTACAAAGAAAGGAGCATTTTTCCATAGATAACGAGTTG CACCTTCTGGATGGTTTTCAGAAACTTGATCGGAAAAATTTCCATGCTTGGAACTACCGAAGGTTTGTTACTACTGCACTGATGAAAAGATCAGGTGAGG AGATATGAAATACACAAAGGAAATGATAGACGACAATTTTAGCAATTACTCTGCATGGCACAATCGTAGTATCCTGTTGTCTAATTTGCTGAAAAGAAAG GCTGAAGGATATTTCCCAAAAGAGAATGTTTTGGAAGAGGAGTATGAGCTAGTCCAAAATGCTCTTTTTACCGATCCAGATGATCAGAGTGGCTGGTTTT ATCATCTTTGGCTTATTGATCAAACAGTGAAAACAGATGCTCCTATACTCGTTTCATCTTGGCCTTCCCATGGGTCTACTATAACTTTACAGGGAAACAA TTGCCTTTATGGTTCTGGATCATCTGTTGTAAACTGTACACTATCAGACATAGGAAAACTTCCAGTCATTCTTTATTTTAGTCAAGCCGTTGAAGGCATC GACTCATCCACAGTAACTGTTAAATCTGAAGTTTTAAATGGTGATCTGGACTGGAAATCACTTTCAACAAGTAACTCGAATGCTGCTCAAGTTTGGGTTA CATATCTGAATGTTGGAAATATGGAGCTCCAGCTGTTGAAAAATTACTCTGTAGAGATCAGCCTCGGTCATTCTAAGGGTGTTGTCTCTTCAAGTGGATA TCACTTTGGCCATCCTATGCATGTTGCCTTTAAACTGTGTATACAGACTCACTATAGAGAACTTGCTGAAGGACAGTGTGAAAAAAAGACTTCATGGAAT GATAATGATTTCCAAAAATTTGATCATTTTCAGGAATCAGAGTCCATTGTTTCTACTGATCAACTAACTAGTGAGAATGATCACCATAATCAAACAACTT CCAACTGGTGTGTGGAGGCAATTGATAAAGAAGTAGATAAATTTCGAGATTTATTATCAGATTCGGACTGCAAACTTGGAAAGCTTACACTTGCTAGACT GTTGACTGCTCTTGATTCATTGTCATCTACACGTGCCGAGAAAATGGTCAATGCTGATGAAGTTCTTCAACTTTATGGTGATCTGATGAAGTTGGATCCA ACACATTCTCTGTACTACAAGGACAAGCATAGTCTGACATTACTTCATCAGATAACATCAACTAGGGAATCTTTACTACCATACTGCCACTACTACAAAG ATGCAGCAAAGACAATTGCTGGCCATGTTTGTCTAAGATTACAAAATTTATCATTATCACGGATTGGATGCATTGAGAATTTGTTGTGGGTGCAAATGCT AGACCTTAGCCACAATGAACTTCAATCAATTGAAGGATTGGAGGCCATGCAACTTTTATCTTGTTTGAATTTGAGTCACAATAAATTTGGTACTTTTACT GCTCTGGGACCTCTTAGATTGCTTAGGTCACTAAAAGTGTTGAATATATCATACAACGAGATAGGCTCGCACTCTATTGACACAAGAAGATACCTATGCT CTTCTCCTTTGTCTCATACTGAAGAATTTGCATGGGACCGTTTTGAAATCCTTGCCGGCAGCTTCAATGCCACGAAATTTTGGGAAGCTTTCTTGATATT TGGTAGTTTGAATTTGACAGAGTTAGACTTAAAAGGAAACGCAGTCGCTGATGAGAACTTCAGACTATTTCTTGTCAAAGTTTTGCCTACTCTCAAGTGG CTGGATGGTGGAGAATTATCTTGACCTATTATGGCTTTTATGGATGAAATTTTTTCCCCTGTTATAATTTGATGTATGGCACTTTCATCAAGACTATTCA CGCATTGGTATACTTGTCCTTGATAAGTGCTATTTTCTTTTCTCATTATCAGATACTTGTACAATTAAACTAGTAAAAGTGGGTAACCTTTTTACAGTAC AAATGCTGATTTACTTCATTAGTGATACACACCCTTCATTCCAATCTCACTGTTTATGTCGTGTGCAAAAATGTGCTGATCCTTAAGCACATGCAAGAAC AGTGGTCATGGGTATTTAGACAGCTATAAATTTCATGAGTTTATATGAAAAGTACAAGATTAATTCAGTGATTCAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_69015; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_186027
| Blastp | Geranylgeranyl transferase type-2 subunit alpha 1 from Arabidopsis with 49.53% of identity |
|---|---|
| Blastx | Geranylgeranyl transferase type-2 subunit alpha 1 from Arabidopsis with 49.44% of identity |
| Eggnog | (alpha) subunit(COG5536) |
| Kegg | Link to kegg annotations (AT4G24490) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019431368.1) |
| Pfam | Protein prenyltransferase alpha subunit repeat (PF01239.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |