| Id Trinity | FTRINITY_DN57485_c0_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_186017 |
| Sequence | AATTTACGACTAATTTAATAACTAATTACTACATAACTGAATAGCAGCACCTAGATCCTTTCCGAGTTACAACCTTACCACCTTCCTCCTCAACTCAAAT CACTCAATAGCTCAGCTTGTTAGTCAAAATGCACGGTCGTCCTCGTAAACCGTTGAAACAAGAAGACACGTCAGCTTTATCAGCCAAAACCCAAAACCTA CGTTCTCTTCAATCTCTCTTCCTCACCAATCATCATAACCGCATATACACAAAGGAAGCATTAGATTTGAACGCGAAGTTAGTTGAGAACAATCCAGAAT GGCACACTGCTTGGAATTACAGAAAACTCGCTGTAAAAAACTTCCTCTCTCCTTCGGAATCTGATCCTGATTACGTCAAATCAATTCTCGATGAAGAACT CAGAGTGGTAACTTTTCTATTAGGTTTCAGTTAATTCAAATTATAATTACAAGGTGAAGGGATCAATAACCGTACCTTATTCGAATGATTAATTGGTCTT TCTTACTAATTTTATATTGTTAGCTTTCCATTCATTTTAATATCCATAAACAAGTTTTCTTCTGTTTAGTGAAAGAAATTTTACCAATGGTGAGAGCTTT ACTTGAGATCCTGAGTTCGAGTATTGCAAATGAAAAAAAAAACATTTGCTGATAGAACTTTATCCCATAATGGTTCTTTCCGACTCAACTCATAGTATTA TAAATTTGATACGATTTCCTAGCACCGAGGGTCTTAGATAAAAATAAAATATTCTGGATTATGGAAATTACAGATGGCTTATTTATTTATTTATATAGTT TTATGTAAGAGTTTAGTAAGGAAGTGTGTAATGTGGAGTTGAGGTTATATAATTTTGAATTGATGTTGTGAGGTAGAGTATGCATTGAGGAAGAATTCTA AATCATATGGTGCATGGCATCATCAAAAATGGGTACAAAGAAAGGAGCATTTTTCCATAGATAACGAGTTGCACCTTCTGGATGGTTTTCAGAAACTTGA TCGGAAAAATTTCCATGCTTGGAACTACCGAAGGTTTGTTACTACTGCACTGATGAAAAGATCAGGTGAGGAGATATGAAATACACAAAGGAAATGATAG ACGACAATTTTAGCAATTACTCTGCATGGCACAATCGTAGTATCCTGTTGTCTAATTTGCTGAAAAGAAAGGCTGAAGGATATTTCCCAAAAGAGAATGT TTTGGAAGAGGAGTATGAGCTAGTCCAAAATGCTCTTTTTACCGATCCAGATGATCAGAGTGGCTGGTTTTATCATCTTTGGCTTATTGATCAAACAGTG AAAACAGATGCTCCTATACTCGTTTCATCTTGGCCTTCCCATGGGTCTACTATAACTTTACAGGGAAACAATTGCCTTTATGGTTCTGGATCATCTGTTG TAAACTGTACACTATCAGACATAGGAAAACTTCCAGTCATTCTTTATTTTAGTCAAGCCGTTGAAGGCATCGACTCATCCACAGTAACTGTTAAATCTGA AGTTTTAAATGGTGATCTGGACTGGAAATCACTTTCAACAAGTAACTCGAATGCTGCTCAAGTTTGGGTTACATATCTGAATGTTGGAAATATGGAGCTC CAGCTGTTGAAAAATTACTCTGTAGAGATCAGCCTCGGTCATTCTAAGGGTGTTGTCTCTTCAAGTGGATATCACTTTGGCCATCCTATGCATGTTGCCT TTAAACTGTGTATACAGACTCACTATAGAGAACTTGCTGAAGGACAGTGTGAAAAAAAGACTTCATGGAATGATAATGATTTCCAAAAATTTGATCATTT TCAGGAATCAGAGTCCATTGTTTCTACTGATCAACTAACTAGTGAGAATGATCACCATAATCAAACAACTTCCAACTGGTGTGTGGAGGCAATTGATAAA GAAGTAGATAAATTTCGAGATTTATTATCAGATTCGGACTGCAAACTTGGAAAGCTTACACTTGCTAGACTGTTGACTGCTCTTGATTCATTGTCATCTA CACGTGCCGAGAAAATGGTCAATGCTGATGAAGTTCTTCAACTTTATGGTGATCTGATGAAGTTGGATCCAACACATTCTCTGTACTACAAGGACAAGCA TAGTCTGACATTACTTCATCAGATAACATCAACTAGGGAATCTTTACTACCATACTGCCACTACTA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_69015; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_186017
| Blastp | Geranylgeranyl transferase type-2 subunit alpha 1 from Arabidopsis with 47.35% of identity |
|---|---|
| Blastx | Geranylgeranyl transferase type-2 subunit alpha 1 from Arabidopsis with 47.22% of identity |
| Eggnog | (alpha) subunit(COG5536) |
| Kegg | Link to kegg annotations (AT4G24490) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019431368.1) |
| Pfam | Protein prenyltransferase alpha subunit repeat (PF01239.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |