Ll_transcript_186039

• Id Trinity: FTRINITY_DN57485_c0_g1_i22
• Name Transcript: Ll_transcript_186039
• Sequence: CATTTTCCCCCCTCCCTGTTTCATTTTCATTTTCTCTCTATAACCTAAGGAATGCCAATTTCATTTCCCCATCTCCCCAAAATTTCCTCCATTTTCTTTT TCTCTCTCCCTTCTCCTTCACTCTCTCTTCTACAAAACCCTAGCTTTTGGATTCGGGTAACGGCACCATTTCTTCCTCAGATTCCATTAACAAAAACCAG AAGATACAACAACTTTATCAACCAAAGCCAAAAAGCTTCGTGCACTTCAATCTCAATTCCTCATCAATCATCACAATCACATGTTACTTCTCTTTATTCC CTCCTTATTATTATTATTATTACTATTACAATCATTTCCATTTCCATTTCTAGTTACACAAAGGAAGCTCTAGATTTGAATGCCAAGTTAGTTGAGAACA ATCCAGAGTGGCACACTGCTTGGAAGTACAGAAAACTCGTTGTAGAGAGCTTCCTCTCTCGTTTGGAATCTGATCCTGATTATGTCAAATCAATTCTCGA TGAAGAACTCAGAGTGGTAACTTTTCTATTAGGTTTCAGTTAATTCAAATTATAATTACAAGGTGAAGGGATCAATAACCGTACCTTATTCGAATGATTA ATTGGTCTTTCTTACTAATTTTATATTGTTAGCTTTCCATTCATTTTAATATCCATAAACAAGTTTTCTTCTGTTTAGTGAAAGAAATTTTACCAATGGT GAGAGCTTTACTTGAGATCCTGAGTTCGAGTATTGCAAATGAAAAAAAAAACATTTGCTGATAGAACTTTATCCCATAATGGTTCTTTCCGACTCAACTC ATAGTATTATAAATTTGATACGATTTCCTAGCACCGAGGGTCTTAGATAAAAATAAAATATTCTGGATTATGGAAATTACAGATGGCTTATTTATTTATT TATATAGTTTTATGTAAGAGTTTAGTAAGGAAGTGTGTAATGTGGAGTTGAGGTTATATAATTTTGAATTGATGTTGTGAGGTAGAGTATGCATTGAGGA AGAATTCTAAATCATATGGTGCATGGCATCATCAAAAATGGGTACAAAGAAAGGAGCATTTTTCCATAGATAACGAGTTGCACCTTCTGGATGGTTTTCA GAAACTTGATCGGAAAAATTTCCATGCTTGGAACTACCGAAGGTTTGTTACTACTGCACTGATGAAAAGATCAGGTGAGGAGATATGAAATACACAAAGG AAATGATAGACGACAATTTTAGCAATTACTCTGCATGGCACAATCGTAGTATCCTGTTGTCTAATTTGCTGAAAAGAAAGGCTGAAGGATATTTCCCAAA AGAGAATGTTTTGGAAGAGGAGTATGAGCTAGTCCAAAATGCTCTTTTTACCGATCCAGATGATCAGAGTGGCTGGTTTTATCATCTTTGGCTTATTGAT CAAACAGTGAAAACAGATGCTCCTATACTCGTTTCATCTTGGCCTTCCCATGGGTCTACTATAACTTTACAGGGAAACAATTGCCTTTATGGTTCTGGAT CATCTGTTGTAAACTGTACACTATCAGACATAGGAAAACTTCCAGTCATTCTTTATTTTAGTCAAGCCGTTGAAGGCATCGACTCATCCACAGTAACTGT TAAATCTGAAGTTTTAAATGGTGATCTGGACTGGAAATCACTTTCAACAAGTAACTCGAATGCTGCTCAAGTTTGGGTTACATATCTGAATGTTGGAAAT ATGGAGCTCCAGCTGTTGAAAAATTACTCTGTAGAGATCAGCCTCGGTCATTCTAAGGGTGTTGTCTCTTCAAGTGGATATCACTTTGGCCATCCTATGC ATGTTGCCTTTAAACTGTGTATACAGACTCACTATAGAGAACTTGCTGAAGGACAGTGTGAAAAAAAGACTTCATGGAATGATAATGATTTCCAAAAATT TGATCATTTTCAGGAATCAGAGTCCATTGTTTCTACTGATCAACTAACTAGTGAGAATGATCACCATAATCAAACAACTTCCAACTGGTGTGTGGAGGCA ATTGATAAAGAAGTAGATAAATTTCGAGATTTATTATCAGATTCGGACTGCAAACTTGGAAAGCTTACACTTGCTAGACTGTTGACTGCTCTTGATTCAT TGTCATCTACACGTGCCGAGAAAATGGTCAATGCTGATGAAGTTCTTCAACTTTATGGTGATCTGATGAAGTTGGATCCAACACATTCTCTGTACTACAA GGACAAGCATAGTCTGACATTACTTCATCAGTTTTACAGGTCTGGATAGGCATGGTTCCCTACGCTCTTCTGAGTCTTCTCTGTTGTCAGTAATAAGATG TTAGATGAGAATTTCAATATAAGTTATATACAATATCCAACAAGCAACAAGAATAACAGGACCTTTCATTTTATGTACTCAATAGTATTCTAAAGGCTTG TTTAGAAAATGATCATGTTCATTTGGCTGTTTCATGAAAGCAGAAAACATGACTAGAAATGTGTTTTATTGGGTTTAACAGATAAAATATATAAGAAAGA TATGATAGATTCAGATTTCTAGGAAGTTTCCTAAAAGAACCAGATTTATGCTTAGCTTCTCATATTCCAAATTCTTGTTCTTTTATTCAGGATATTCTCT TAATGTCTATTGTGTTGTCCTAAGTCAACTAGTTTTTCGTTAAAATCGTGCTTAATAGTTTAAGCTTTGGGGCAACCATGTTTCTGTATTCTTGTATTTA CGACTATATCTCAGTTGCAAAATCTTCCGTTTCTACCATAAATAATTTTTCTTTTTCATGTTTGCTGATTCTTGATTCTTCAGATAACATCAACTAGGGA ATCTTTACTACCATACTGCCACTACTACAAAGATGCAGCAAAGACAATTGCTGGCCATGTTTGTCTAAGATTACAAAATTTATCATTATCACGGATTGGA TGCATTGAGAATTTGTTGTGGGTGCAAATGCTAGACCTTAGCCACAATGAACTTCAATCAATTGAAGGATTGGAGGCCATGCAACTTTTATCTTGTTTGA ATTTGAGTCACAATAAATTTGGTACTTTTACTGCTCTGGGACCTCTTAGATTGCTTAGGTCACTAAAAGTGTTGAATATATCATACAACGAGATAGGCTC GCACTCTATTGACACAAGAAGATACCTATGCTCTTCTCCTTTGTCTCATACTGAAGAATTTGCATGGGACCGTTTTGAAATCCTTGCCGGCAGCTTCAAT GCCACGAAATTTTGGGAAGCTTTCTTGATATTTGGTAGTTTGAATTTGACAGAGTTAGACTTAAAAGGAAACGCAGTCGCTGATGAGAACTTCAGACTAT TTCTTGTCAAAGTTTTGCCTACTCTCAAGTGGCTGGATGGTGGAGAATTATCTTGACCTATTATGGCTTTTATGGATGAAATTTTTTCCCCTGTTATAAT TTGATGTATGGCACTTTCATCAAGACTATTCACGCATTGGTATACTTGTCCTTGATAAGTGCTATTTTCTTTTCTCATTATCAGATACTTGTACAATTAA ACTAGTAAAAGTGGGTAACCTTTTTACAGTACAAATGCTGATTTACTTCATTAGTGATACACACCCTTCATTCCAATCTCACTGTTTATGTCGTGTGCAA AAATGTGCTGATCCTTAAGCACATGCAAGAACAGTGGTCATGGGTATTTAGACAGCTATAAATTTCATGAGTTTATATGAAAAGTACAAGATTAATTCAG TGATTCAAAA
• Tissue: flowers
• Gene name: LI_gene_69015;
• Additional information: details;

Expression of Ll_transcript_186039

FPKM

• FPAB: 0.5
• FPNAB: 0.9
• LF1: 0.6
• LF2: 0.7
• LF3: 0.4
• LF4: 0.2
• UF1: 0.7
• UF2: 0.4
• UF3: 0.7
• UF4: 0.2

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_186039

• Blastp: Geranylgeranyl transferase type-2 subunit alpha 1 from Arabidopsis with 47.01% of identity
• Blastx: Geranylgeranyl transferase type-2 subunit alpha 1 from Arabidopsis with 46.88% of identity
• Eggnog: (alpha) subunit(COG5536)
• Kegg: Link to kegg annotations (AT4G24490)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019431368.1)
• Pfam: Protein prenyltransferase alpha subunit repeat (PF01239.21)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;