| Id Trinity | FTRINITY_DN57492_c1_g1_i6 |
|---|---|
| Name Transcript | Ll_transcript_184098 |
| Sequence | AAATATTTTACAATTTGCAGGAAAGTCGTAATTGTGGGTGGAAGAATCAGGCATTCACTCAAATTCCATTTCAATCTCTCTCTCAGATCTCTAATTTCAA ATAACAAAAATTTACAAGAATGGTGAGAGGATTACTTAAAAACATTGCCTCTCGCTCCCTCTCCGTAGCCGGCAAATGGCAACACCACCAGCTCCGCCGC CTCAACATCCACGAGTACCAGGGAGCTGAATTGATGAGCAAATATGGAGTGAATGTTCCAAAAGGCATAGCTGTTTCCACTGTTGAAGAAGCCAAAAATG CCATCAATCAAGTTTTTCCCAATGAAAATGAGTTGGTGATTAAGAGTCAAATTTTAGCTGGTGGACGAGGCTTGGGGACTTTTAAAAGCGGTCTCAAGGG AGGAGTTCACATTGTTAAGACTGCCCAGATTGAAGACATAGCTGGGAAGATGCTTGGGCAGATACTTGTTACCAAACAAACTGGTCCCCAGGGAAAACTT GTTAGCAAGGTTTACTTGTGTCAAAAGCTGTCACTTGTGAATGAGATGTACTTTGCTATAACTCTGGATCGTAAGACTGCTGGTCCACTTATTATTGCTT GTAGCAAGGGAGGAACCAGCATTGAAGACCTCGCAGAGAAATTCCCAGACATGATTATAAAGGTACCTATTGATGTTTTCAAAGGAATTACTGATGAAGA TGCTGCAAAGGTTGTTGATGGTTTAGCTCCCAAAGGGGCAGATAGAAATCAATCAATTGAGCAAGTGAAAAATCTGTATAAACTTTTTTCTGAATCTGAC TGCACTCTTCTGGAAATCAATCCCATTGCGGAGACTGCTGATAAACAATTGGTGGCTGCTGATGCTAAGTTGAATTTTGATGATAATGCTGCATATCGCC AAAAAGAGATATTCACTCTCCGTGATACAACACAAGAGGATCCTCGAGAGGTGGCTGCTGCAAAGGCAGATTTGAATTATATTGGGTTAGATGGAGAAAT TGGCTGCATGGTGAATGGAGCAGGGCTAGCAATGGCCACAATGGACATAATTAAATTGCATGGGGGTACTCCTGCCAATTTTCTGGATGTAGGTGGGAAT GCCTCTGAGGGCCAGGTGGTTGAAGCATTTAAAATATTGACTGCTGATGACAAAGTGAAGGCAATTTTGGTTAACATTTTTGGTGGTATAATGAAGTGCG ATGTCATAGCAAGTGGAATAGTGAATGCTGCAAAACAGGTTAGTGCAATTATGTACTCTTCACCGATGTCAAAATAAAAATTACACCTGTAAAAGTTGAT TTATGCTTTGGCCTTCTGGAGGATTGGGAATAACGAGAGCATTTCTCCTTTCTCCTACGAGTTATAACATGGTTGTAATCTTCATTAGCAGTTCTAGATA ATGATTGTTTGGAACTACTATGTCGTATCAAAACACTCAACTAAATCAAGAGATTTTTGGGTACAGAAAATATAGATTCTTCTTATTGGATGTCTTATAG GATGTACCATGATCGGTTGACAACTGTTTTGGTCTTTAATGGGTAATTGAATTTTTTATTCTTACATATTTTTAAATAGTTAGATATCAAGAAAGAGAGA TATAGAACTAGTATTATATTATTATTCTCTGTGATATTTTTTTAATTGAAAAAGAATAGGGATTGAACACAACCGCTTCTATGTTATTCTCATCTTATAG TAGCAATAACTAGCATGTTTGGTCTCTTTGGTAGTTGCTTTCAAATTATATCAAATACACCAAGTTCAAATGCTAACCAACCAAAAATCTTATAGTAGCA ATAACTCTCTTGGTGTTACTTTTAAGGTTGACCTGAAAGTACCTGTGGTAGTTCGTCTAGAAGGCACCAATGTTGATCAAGGAAAAAGAAT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_69092; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_184098
| Blastp | Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial from Oryza sativa with 86.1% of identity |
|---|---|
| Blastx | Succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial from Oryza sativa with 86.1% of identity |
| Eggnog | Succinyl-CoA synthetase subunit beta(COG0045) |
| Kegg | Link to kegg annotations (4330016) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019433054.1) |
| Pfam | ATP-grasp domain (PF08442.9) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |