Ll_transcript_130773

• Id Trinity: FTRINITY_DN57516_c0_g1_i18
• Name Transcript: Ll_transcript_130773
• Sequence: ATCTTGAAATAAAAAAGTTGGAGCTGAAGGGTGTAGTTAGAGGTTGACTGTTTGAGTTGAATGGCTTTATAAGCAAACAAAAAAGTACAGAACCCACACT CTCTTGGGTCATCCTGTTCCTCAAGTCTTGCACTCAGAACTATTTCTCTGCAACCAAATCCTTTTTAGGGTTTCACTCATTGATTCTTCAATTTCCCCAT AACAACAAACAAACATTACCATTGCTTGGATTTAAGATTGATCTTCAAGATTCTGATTCTGAATACCTCGAACTTTCAATTTCTACTTTGAACTCAAAAA CTCACTTTCTGAATGATGGAAAGGTCTAGATCTAAGAGAAACTACTACTATGACCAAGACTATGATTCTGAAACCTTAGCTCGGACGAGGCCTCGCTATA ACCACCACTATTCCAATCGCCACCGTGGCGCCTCCGGCAGCCGCGGTGGCCGTCAGGCTAAGCCACAGCAGGACGTGCCGGCAACGGTTACCACAAGTTA CCGCATTCTGTGCCATGATTTAAGGGCCGGCAGCGTGATCGGCAAGTCCGGCAATATTATTAAGTCAATTCGGCAGCACACCGGCGCGTGGATCAACGTG CACGAGCTGATCCCGGGAGATGAGGAGCGTATCATCGAGATTTCGGACACGCGCCGCCGTGACCCAGGCGGGAGAATGCCGTCGTTCTCGCCGGCGCAGG AGGCGCTGCTCCTCATCCACCAGAGGATTCTGGAGAGCGACGCGGCGTACAGGGTGGCTGAGGAGGAGGAAGAGGAGTATGGTGGTGGCGGCGGTGGGAG GAACCGGGACCGGGTGGCGATGAGGTTGGTGGTGTCGAGAATGCATGTTGGGTGTTTGTTGGGGAAAGGAGGGAAGATTATTGAACAAATGAGGATGGAA ACAAAGACACAAATTAGGATACTCCCTAGAGATCACAACCTACCTCGTTGTGTTTCAATGTCTGAAGAAATTGTTCAGGTGCAAAAACAATAACCCATAA CACAAAAATGAATAAAACAAACTTGGAACTTTATTTTCTTATATCTGATGATTTCTTAAGTTGCATGCATGATCAGAACCTCAATTTCGTAGTTTCTTTA TTCCGGTAAGTTACTATGGAGGTGGTTCTTTTTGCTTCTGGATGGATGACTAATTACAGTTGCAGAACTGAAGATAATGGCTGTGGACGTTTGACTGTTA TTTTTTCTCTCATAAATTAATGCAGTAGAGTTTGAACTAGCAATGATTACATGATTTTTGCTATGGTATGAATGAATATAATTTGTATTGGAGCTAGTTT ACTACTTTCAGCTTGAAAGCTGGAAAAGGAGGATGTGTATTCAAGTTCAAAGCATTCCAGCTTTCAACCCGTAGATCAGAGTCCATAATTTTTTTATTGC TGGTTTTGTGCTGCATAAGTGAAGTTGTTACCAACTTGGTTGGATCAAGTTACAGGTGATGTAAATGCTGTGAAGAATGCTCTAGAAGTGATATCATCAC GGTTGAGGGAGAGCCAGCATCGTGACCGCAGCCATCTCCAAGGACGTGGACATTCACCAGATCGTTTTTTCCCACCTGATGATGATTACATTCCTCATGG TGGATCTCGTAGATCGTCTGTGGAGGAGGCTGCTTTGGGATCACGAATATCCACTACCAATGCCAGAAACAATAACCATATGTCACCAGGTTATGCAATG GAGTCAGGGGCTGCTATTGATACTCAGCCCTTCTACGGAGAGGACCTAGTTTTCCGTATACTTTGTCCAGTTGAGAAAGTTGATCGTATCATCGGGGAAT CAGATGGAATTGTAGGTTTTCTTCAGAATGAAGTTGGTGTTAATATCAAGGTCACTGATCCCATTGGTGGTTCAGAGGAGCGGATAATTATCATTACTTC AGAGGAGGGTCCGGATGATGAGTTGTTCCCAGCTCAGGAAGCTTTGTTGCATATTCAAACTCGCATTGTCGATCTTGTTCTAGATAAGGAAAATATTATA ACCACCAGGCTCGTCATCCCATCTAGCGATATTGAATGCTTAGATGGAAAATATTCATCACTATCGGAAATAAAGAGGTTGACTGGTGCTAATATTCAAA TTCTGCCAAGAGAACAACGGCCTCTCTATGTTGCAAAGACTGACGAGTTAGTACAGATCGTAGGAGAAATAAAAGCAGCCCGAGAAGCTGTTCTTGAGGT GACATCAAGATTAAGAAGTTACTTGTATAGGGATTTCATTCAAAGGGACACAGTATCACCATCGGCCCCCTTATCTAGCATGGAGGCATCATCTTCCAAT ACTACAGCTCCAGCTACTGAAACATCCACAATCTATCAGAATGCGCAAACCGTGGCAGCAACAGTTCTTCCATCAAAGATGGAAACTGGAGGATCTAGTG CTGAGACAGGAAAGCAGAAAGGAAATGAGCGGCATGATGATGTCCCAAGTGGTTTAAATAGGATCACCATGCCATCTGTTACAAGGAGCATTCTTGAAGT TGTTCTACCGGAGTATGCAGTTCCAAGGCTTATAGCAAGATCCAAAAGCAAGCTTGCACAGATAAGTGAGGTGCACGTGATTAGATCTTTCAGTCCCTTT AATATTTGAATTGTGTAAAAAACATTTTATACCAAGCAATTGGTGCCTTAAAATGTCATGCTTACTGTTATGTTGGCATCTTCCGTATGATAACCGTAAG GAGCTTTCCCCTCTATTCCCATGAGCAAGTTAGTTCCTCTTAGAACAAGAAACACTGAACTTGTTTTTTCATGATTCATGAATTGTTCTACTTACATATT GTATCTAGATCACACTGAACTTATTAGTATTTCTTGTTTTAGCTTGAAGATTGAAAAGTAAAACCTTAGGACCTTAATAACCAAACTTTTCTTCTCAGAT ATAAATCTGGAAATTATTATTTTGATAACTTCCCAATCCTTGATTTTAATAGAAAGCATGTATTTCCACTTATGTTTTGATGGGAACAGTTGTCAGGAGC TAATGTAACTCTTGTAGAGGACAGACCAGATGTGATACATAAAATTGTTCAGCTATCTGGTACTCCAGAACAGGCAGAGAGAGCCCGGAGCTTGCTCCAG GGATTTATTTTGAGCACACAAGAAGATGGTCCTTAAGTGATGTTCATACCGATTGGCGATTGATGGTTCGACAACAGTGCCGCTGTTGTATTGTCTGGGG CATCTTGTTACATGCCCTGATTGGCTGTGTTTACAACACTGTTGTGGCCTGGAGTTAGAATCTTCCATGGGAGAAGCATTCCAATGTAAATTTTGTTGTA TTAAGAGCTTTTTTGTTAGTTGTTTTATTAGTATTTTCAGCAAGTGCTGGGGAGCAAATGTTGGCTACGCTGAATGGTGCTAGACATGTTTTTTATGAGT GAAAATTAAAAGTTCTTCATGGAGGATGATTCAGAAGCTTTTTCCCTTAATCACTAGAAGCTTTTCCCCTTAATCACTAGAAGTTTTTTCCCTTAATCAC TAGAAGCTTTTCCCCTTAATCACTAGAAGTTTTTTCCCTTAATCACTAGAAGC
• Tissue: flowers
• Gene name: LI_gene_69313;
• Additional information: details;

Expression of Ll_transcript_130773

FPKM

• FPAB: 0.1
• FPNAB: 0.6
• LF1: 0.4
• LF2: 0.2
• LF3: 0.2
• LF4: 0.3
• UF1: 0.2
• UF2: 0.1
• UF3: 0.3
• UF4: 0.3

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_130773

• Blastp: RNA-binding KH domain-containing protein RCF3 from Arabidopsis with 50.33% of identity
• Blastx: RNA-binding KH domain-containing protein RCF3 from Arabidopsis with 48.84% of identity
• Eggnog: mRNA transport(ENOG410XNN8)
• Kegg: Link to kegg annotations (AT5G53060)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019415294.1)
• Pfam: KH domain (PF00013.28)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;