| Id Trinity | FTRINITY_DN57516_c0_g1_i8 |
|---|---|
| Name Transcript | Ll_transcript_130762 |
| Sequence | ATCTTGAAATAAAAAAGTTGGAGCTGAAGGGTGTAGTTAGAGGTTGACTGTTTGAGTTGAATGGCTTTATAAGCAAACAAAAAAGTACAGAACCCACACT CTCTTGGGTCATCCTGTTCCTCAAGTCTTGCACTCAGAACTATTTCTCTGCAACCAAATCCTTTTTAGGGTTTCACTCATTGATTCTTCAATTTCCCCAT AACAACAAACAAACATTACCATTGCTTGGATTTAAGATTGATCTTCAAGATTCTGATTCTGAATACCTCGAACTTTCAATTTCTACTTTGAACTCAAAAA CTCACTTTCTGAATGATGGAAAGGTCTAGATCTAAGAGAAACTACTACTATGACCAAGACTATGATTCTGAAACCTTAGCTCGGACGAGGCCTCGCTATA ACCACCACTATTCCAATCGCCACCGTGGCGCCTCCGGCAGCCGCGGTGGCCGTCAGGCTAAGCCACAGCAGGACGTGCCGGCAACGGTTACCACAAGTTA CCGCATTCTGTGCCATGATTTAAGGGCCGGCAGCGTGATCGGCAAGTCCGGCAATATTATTAAGTCAATTCGGCAGCACACCGGCGCGTGGATCAACGTG CACGAGCTGATCCCGGGAGATGAGGAGCGTATCATCGAGATTTCGGACACGCGCCGCCGTGACCCAGGCGGGAGAATGCCGTCGTTCTCGCCGGCGCAGG AGGCGCTGCTCCTCATCCACCAGAGGATTCTGGAGAGCGACGCGGCGTACAGGGTGGCTGAGGAGGAGGAAGAGGAGTATGGTGGTGGCGGCGGTGGGAG GAACCGGGACCGGGTGGCGATGAGGTTGGTGGTGTCGAGAATGCATGTTGGGTGTTTGTTGGGGAAAGGAGGGAAGATTATTGAACAAATGAGGATGGAA ACAAAGACACAAATTAGGATACTCCCTAGAGATCACAACCTACCTCGTTGTGTTTCAATGTCTGAAGAAATTGTTCAGGTTACAGGTGATGTAAATGCTG TGAAGAATGCTCTAGAAGTGATATCATCACGGTTGAGGGAGAGCCAGCATCGTGACCGCAGCCATCTCCAAGGACGTGGACATTCACCAGATCGTTTTTT CCCACCTGATGATGATTACATTCCTCATGGTGGATCTCGTAGATCGTCTGTGGAGGAGGCTGCTTTGGGATCACGAATATCCACTACCAATGCCAGAAAC AATAACCATATGTCACCAGGTTATGCAATGGAGTCAGGGGCTGCTATTGATACTCAGCCCTTCTACGGAGAGGACCTAGTTTTCCGTATACTTTGTCCAG TTGAGAAAGTTGATCGTATCATCGGGGAATCAGATGGAATTGTAGGTTTTCTTCAGAATGAAGTTGGTGTTAATATCAAGGTCACTGATCCCATTGGTGG TTCAGAGGAGCGGATAATTATCATTACTTCAGAGGAGGGTCCGGATGATGAGTTGTTCCCAGCTCAGGAAGCTTTGTTGCATATTCAAACTCGCATTGTC GATCTTGTTCTAGATAAGAACAATACTATAACCACCAGGCTTGTCGTCCCATCTAGCGATATTGAATGCTTAGATGGAAAAGATGCATCACTATCAGAAA TAGTGAGGTCGACTGGTGCTAATATTCAAATTCTGCCTAGAGAAGAACGACCTCTCTGTGTTGCAAAGAGCGATGAGTTAGTACAGATTGTAGGAGAAAT AAAAGCAGCTCGAGATGCTGTTGTTGAGGTGACATCAAGATTAAGAAGTTACTTGTATAGGGATTTCATTCAAAAGGATACAGTACCTCCAACAGCCCCC TTATCTAGCGTTGAGGCATCTTCCTCCAATACTATAGCTCCAGCTATTGAAACATCCACAACCTATCAGAATGTGCAAACTGTGGCAGCAGCAGTTCTAC CATCGAAGAAGGAAACTGGAGGATCTAGCATGGAGGCAGGAAAGCAGAAAGACAATGACCGTCGGGATGATGTGCAGAGTGGTTTAAATAGGATCACCAT GCCACTTGTCACAAGGAGCATTCTTGAAGTTGTTATACCGGAGTATGCAGTTCCAAAGCTTATAGCAAGATCCAAGAGCAAGCTTGCACAGATAAGTGAG TTGTCGGGAGCGAATGTAACCCTTGTAGAGGATAGACCAGATGTGACACAGAAAATTATTCAGCTATCTGGTACTCCAGAACAGGCAGAAAGAGCCCAGA GCTTGCTCCAAGGATTTATTTTGAGCACACAAGAAGATGGCCCTTAAGTGATGGAATACCGATAGCTGGTTAGACAAAAGTGCCGTTGTTTTATTCTCTG GGGCATTTTGTTACATGCACTAATTGGTATTTCATGTGTTTACGAGACTGTTGTCGCCTAGAGTTTGGGTTTTCAATGGGAGAAGCATTCCAATGTAAAT GTTGTTGTATTAAGAGAAATTTTTTTGTTAGTTGTTTTATTAGTATTTTCAGTAAGTGTGGGGGAGCAAATGTTGGCTACCCTGCTAGACCTGTTATTTT TTGAGTAAGAAGTGGGAAGTTTTTCATGGAAGATGAATCAGAAGCTTTTTTGCCTCAATTACTAGAAGTCCTTGCATGCTTGTAGTGCATCAACTATAAA TGCATGTTCCAGGAAACCCATGGGTTAAAATTGTTACAAGTTGAGTTCAGGTTTTGGAATTTGCACCTGCATGCAAATGGGGACAGACTTTTAAAACCCG GTAATTGGACGAGGCGGATACTGGTGCATCCATACTTGTGGGTATCCGCACTGACCGTATATATATAGAGATAACTTCCCACATTTTCCCCTAACCTGTT CTCATTGTGTTGATGCTGTCACTGGAACTGAAACCCTAAACATGAGATGTGTTGAACCATGTTACTTGGTTGTTGCCATCATTGTTTAATGCTTGAAAAG TCATGCCGCCATCCACCTCGGATTGCCATCGACTTCATTGTGTTGCTGGTCGCCTGGTTGTTGCTTCCTTCAACCTTGAATTGTGAATTCTGATGCAGAA CACAATTATGACCTCAAATTGCAACGCCGCACAAGATTGTAAGAGGTAAACACCTCTACACCTTGACCAATTTGTCTACTCTGCAGTGCCATTAAAATTA CTTTTTTTGTTCTAGTGATTTGGAAATATGAATCTCCTTTTTTCGCTTACAGTTACACCTCTAATCTATAAGTTATCCTGCTTCTTTTAAAAAGGTTTTT TTGTTCTCTCATAATTATTTCCATCTTTAT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_69313; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_130762
| Blastp | RNA-binding KH domain-containing protein RCF3 from Arabidopsis with 59.01% of identity |
|---|---|
| Blastx | RNA-binding KH domain-containing protein RCF3 from Arabidopsis with 58.89% of identity |
| Eggnog | mRNA transport(ENOG410XNN8) |
| Kegg | Link to kegg annotations (AT5G53060) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019415294.1) |
| Pfam | KH domain (PF00013.28) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |