| Id Trinity | FTRINITY_DN57521_c2_g1_i1 |
|---|---|
| Name Transcript | Ll_transcript_132949 |
| Sequence | GCATGGACTTGTAAAGTAAACCATTAGGGTCAACCAAACGCGTGGAAGGTGATGTTGGGTCAAAGATATTACTCTTGGAAAATAGATAGATACACATGTG GTAGTGAACATAACAGAAACACTGCAAGATGTCCAAAATTATTCTATCTTCACCTTCACCAACCCTTTTTCCCTTAACCCTTTTCTTCATCCTCCTCCTC CTACTACACCCATGTGAAGCTGAAGATGTTGCCATTTACTGGGGTCAAAATGTGAAGGAGGGAAACCTTACTGAAACTTGTGCAACAGCAAAATATTCCT TCATCAATATAGCTTTTCTTACCACTTTTGGCAGCAGCAAAACCCCCCAACTCAACCTTGCAGGTCATTGTGACCCTTCTACTAATGGATGCACTTTGAT TGGGAGAGACATCATGAATTGCCAAAATCAAGGGATCAAGGTCATGCTCTCTATTGGAGGAGGATCTGAAGGCTCCTATGCTCTAACTTCTTCAGAAGAT GCTAAAAATGTGTCAGATTACTTATGGAACAATTTCTTGGGTGGCACTAATTACACTTCTTCACGCCCTTTTGGAGATGCTATATTAGATGGCATAGATT TTGACATATATGGAACTAATTCACACTGGGATGAACTTGCACGTTACCTCAAGTCACACAACAATAACACAACTACAAAAACTATATACTTAACTGCTGC ACCTCAGTGTACATTTCCTGATTATTCAATGGGTACTGCCCTTGACACAGGGCTCTTTGACTATGTCTGGATACAATTCTACAACAATCCTCCATGTGAT TATGGTAAAGAAAGTATTGACAACATTGTGAATGCATGGAACAAGTGGACAACATCATTAAAAGGAGCAAAAGTATTTCTCGGGCTACCAGCAGATCCAG CAGCTGCGGCAACAGGTTATGTTCCACCTGATGTTTTAGAATCTAAGGTCTTACCTATGATAAATAAGTCACCAAATTATGGAGGTTTAATGTTGTGGTC AAGGTACTATGATAAAATGAGTGGATATAGTACTGACATTCAGATAAATGTTTTATGCACACAGCAAAGCATTAACACATGCAGGAGTCATGACAGTGGC TTCACACAACGTTATGGTTTTGTGTCCATAGCTGGTGTTAAGGTTTATGATGGTGATAAGAACATTGATGCAAAGTGCTGTGAGATCATATGTTGGAATA ACTGTTCTTGCGAAGCTTACGCGCTAGTGAATCATAATAACAACACTGGATGCCAGATATGGGGAAAAGGAGCGAGATTGATTAGAGATTCTGGAGAAAA GGGAGAGCCAATGATGCAAATCTACTTTGTTAAACACAAAGTGAACAGGTGGTGGATATGGCTCATAATTGGTGTTGGAGGAGCCCTTTCATTACCTGTG ATCTTCTATTTATGCTATACCATCTGGAAAAAATATAAAGCAAAAGGTAAATACCGTATATATTTCTTTTAACAATTGTTATGAGTTCCAGGCCTCTCTT TTCTGTACCTTATAGTTTCATGTTACATCGTTAGTGGATAGAAAAATGATGAAGAAGAAGTTATTACATGAGATTGGAGGTAATGCAATGCTTTCGATGG TGTACGGAAAAGCCAGGAAAAGAAAGAACAAGGAAAAGACAAACAATGAGGTGGAAATATTTAGTTTTGAAACCATTGTTGCTGCCACAAACAATTTCTC TGTTGCTAATAAGCTAGGAGAGGGTGGTTTTGGTCCTGTTTATAAGGTAATATCATTCTGCATACTTAAAGTGGAAGCTATCTGAATAAGAATTGATATA ATTAATAACCATTTTCAGGGAACTTTAAGTGATCAGCAAGAGGTAGCAATAAAGAGACTTTCTAAAAGTTCAGGGCAAGGGCTGATAGAGTTTAAGAATG AAGCTAAACTCATGGCTAAACTGCAACACACTAATCTTGTAAAGCTTTTAGGATTTTGCATCGAGAGAGATGAAAGAGTACTAGTTTATGAGTACATGTT GAATAAGAGCTTAGACTTCTACCTATTTGGTATGCTCTCTTTTATTGACCATGTTTATAAAAATCTTCAAGATGATAGCATAAAGCATTTTTTGTAAGCA CTCTTACTTGAAAACAGATTCAACTAGAAGGAATTTGCTAGACTGGGGAAAACGCTTGAACATCATTGGAGGCATTGCTCAAGGACTTCTTTATCTTCAC AAGTATTCAAGGCTAAAGGTGATACACCGGGACCTGAAAGCAGGCAACATATTACTTGATGAAGAGTTGAATCCTAAAATATCTGATTTTGGCATGGCTC GAATATTTGGTCATAGAGGATCAGAAGAAAACACAAATAGAGTTGTTGGTACATACGGCTACATGTCTCCTGAGTATGCAATGAATGGTGTTGTGTCAAT CAAAACAGATGTATTCAGCTTTGGTGTATTACTATTAGAGATTCTAAGTGGTAAGAAGAATAATAGTCGCTATCATCCCGACCGTCCACTGAGCCTCATA GGACATGCCTGGCAGCTGTGGAATGAAGGCAGAGCTCCTGACCTAATAGACCCAGCATTTAATGAGTCAAGTAATGAGAATGAAGTTGTGAGATGTATTC ACATTGGTCTATTGTGTGTACAAGATCAGGCAACAGATAGACCTACAATGTTAGAGGTTGTTTCTTTTCTATCAAATGAAACAATCAAACTCCCCCAACC AAAGCAGCCAGCATTCTTCATCAATGTTGCTGTGGAAGAGTCAGAGATTCCTAACAGTAGGCAAGAATATCATACCTTAAATGATGTAACAATTTCTAGT ATGTATGGCAGATAGAATATTATTATTTTGACACCAAAAAATATTAGATAATTTTGCATAGTACTTACTTTATTCAGCTTACACAATTATTGGCTACAAG TTTTGTTTTGTGAAGCAAATACAAAGTGTGTATGCATTGGAAAAGAGGTGGTGATGTCACACACAGCCTAGCAAACAAACCATGTTACTTGCAGCCATTG TTAACAAATTCTATCATACCACGACACACGACATAAACGCAGATCTCTGCAACTATCCTACTTGATAAGGGCCATGTTTCCAAAACATATGTATAAAACA AAAATAATAATTGTTCTTTGTGTATATCAATTCTTCCCCTCTACTTGAAATTTTAAATCTTAATCAAATTTATTTTATCTCTAATAACAAAGTAAAATCT TTATTCAATAGCTAATGTTTTCCACGTGTAAAAGATTAAGTGGTCCAAGTGTGTTTTACTTCCCCTTCTAGCATCCGAATCTGATCATAGTGGGACTAAT AACAAAACAGAACTCATTTGTGTTGTGTCTTTGTTTCATAATAGAAAGACAGTTAAGTGGTACAAGTTTACAGTTACCTCTATAGTTAGCAACTAAAAAA CATGTTATTGTGATGTTAGTGTTGTGTGATAGAGGAAGGTGGTGAAAATGGATTTTTGGCCAGAATAT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_69351; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_132949
| Blastp | Acidic endochitinase from Vitis with 58.68% of identity |
|---|---|
| Blastx | Hevamine-A from Hevea with 63.9% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (100233088) |
| CantataDB | Link to cantataDB annotations (CNT0001079) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019458283.1) |
| Pfam | Glycosyl hydrolases family 18 (PF00704.27) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |