| Id Trinity | FTRINITY_DN57521_c2_g1_i12 |
|---|---|
| Name Transcript | Ll_transcript_132960 |
| Sequence | GCATGGACTTGTAAAGTAAACCATTAGGGTCAACCAAACGCGTGGAAGGTGATGTTGGGTCAAAGATATTACTCTTGGAAAATAGATAGATACACATGTG GTAGTGAACATAACAGAAACACTGCAAGATGTCCAAAATTATTCTATCTTCACCTTCACCAACCCTTTTTCCCTTAACCCTTTTCTTCATCCTCCTCCTC CTACTACACCCATGTGAAGCTGAAGATGTTGCCATTTACTGGGGTCAAAATGTGAAGGAGGGAAACCTTACTGAAACTTGTGCAACAGCAAAATATTCCT TCATCAATATAGCTTTTCTTACCACTTTTGGCAGCAGCAAAACCCCCCAACTCAACCTTGCAGGTCATTGTGACCCTTCTACTAATGGATGCACTTTGAT TGGGAGAGACATCATGAATTGCCAAAATCAAGGGATCAAGGTCATGCTCTCTATTGGAGGAGGATCTGAAGGCTCCTATGCTCTAACTTCTTCAGAAGAT GCTAAAAATGTGTCAGATTACTTATGGAACAATTTCTTGGGTGGCACTAATTACACTTCTTCACGCCCTTTTGGAGATGCTATATTAGATGGCATAGATT TTGACATATATGGAACTAATTCACACTGGGATGAACTTGCACGTTACCTCAAGTCACACAACAATAACACAACTACAAAAACTATATACTTAACTGCTGC ACCTCAGTGTACATTTCCTGATTATTCAATGGGTACTGCCCTTGACACAGGGCTCTTTGACTATGTCTGGATACAATTCTACAACAATCCTCCATGTGAT TATGGTAAAGAAAGTATTGACAACATTGTGAATGCATGGAACAAGTGGACAACATCATTAAAAGGAGCAAAAGTATTTCTCGGGCTACCAGCAGATCCAG CAGCTGCGGCAACAGCAAAGCATTAACACATGCAGGAGTCATGACAGTGGCTTCACACAACGTTATGGTTTTGTGTCCATAGCTGGTGTTAAGGTTTATG ATGGTGATAAGAACATTGATGCAAAGTGCTGTGAGATCATATGTTGGAATAACTGTTCTTGCGAAGCTTACGCGCTAGTGAATCATAATAACAACACTGG ATGCCAGATATGGGGAAAAGGAGCGAGATTGATTAGAGATTCTGGAGAAAAGGGAGAGCCAATGATGCAAATCTACTTTGTTAAACACAAAGTGAACAGG TGGTGGATATGGCTCATAATTGGTGTTGGAGGAGCCCTTTCATTACCTGTGATCTTCTATTTATGCTATACCATCTGGAAAAAATATAAAGCAAAAGGTA AATACCGTATATATTTCTTTTAACAATTGTTATGAGTTCCAGGCCTCTCTTTTCTGTACCTTATAGTTTCATGTTACATCGTTAGTGGATAGAAAAATGA TGAAGAAGAAGTTATTACATGAGATTGGAGGTAATGCAATGCTTTCGATGGTGTACGGAAAAGCCAGGAAAAGAAAGAACAAGGAAAAGACAAACAATGA GGTGGAAATATTTAGTTTTGAAACCATTGTTGCTGCCACAAACAATTTCTCTGTTGCTAATAAGCTAGGAGAGGGTGGTTTTGGTCCTGTTTATAAGGTA ATATCATTCTGCATACTTAAAGTGGAAGCTATCTGAATAAGAATTGATATAATTAATAACCATTTTCAGGGAACTTTAAGTGATCAGCAAGAGGTAGCAA TAAAGAGACTTTCTAAAAGTTCAGGGCAAGGGCTGATAGAGTTTAAGAATGAAGCTAAACTCATGGCTAAACTGCAACACACTAATCTTGTAAAGCTTTT AGGATTTTGCATCGAGAGAGATGAAAGAGTACTAGTTTATGAGTACATGTTGAATAAGAGCTTAGACTTCTACCTATTTGGTATGCTCTCTTTTATTGAC CATGTTTATAAAAATCTTCAAGATGATAGCATAAAGCATTTTTTGTAAGCACTCTTACTTGAAAACAGATTCAACTAGAAGGAATTTGCTAGACTGGGGA AAACGCTTGAACATCATTGGAGGCATTGCTCAAGGACTTCTTTATCTTCACAAGTATTCAAGGCTAAAGGTGATACACCGGGACCTGAAAGCAGGCAACA TATTACTTGATGAAGAGTTGAATCCTAAAATATCTGATTTTGGCATGGCTCGAATATTTGGTCATAGAGGATCAGAAGAAAACACAAATAGAGTTGTTGG TACATACGGCTACATGTCTCCTGAGTATGCAATGAATGGTGTTGTGTCAATCAAAACAGATGTATTCAGCTTTGGTGTATTACTATTAGAGATTCTAAGT GGTAAGAAGAATAATAGTCGCTATCATCCCGACCGTCCACTGAGCCTCATAGGACATGCCTGGCAGCTGTGGAATGAAGGCAGAGCTCCTGACCTAATAG ACCCAGCATTTAATGAGTCAAGTAATGAGAATGAAGTTGTGAGATGTATTCACATTGGTCTATTGTGTGTACAAGATCAGGCAACAGATAGACCTACAAT GTTAGAGGTTGTTTCTTTTCTATCAAATGAAACAATCAAACTCCCCCAACCAAAGCAGCCAGCATTCTTCATCAATGTTGCTGTGGAAGAGTCAGAGATT CCTAACAGTAGGCAAGAATATCATACCTTAAATGATGTAACAATTTCTAGTATGTATGGCAGATAGAATATTATTATTTTGACACCAAAAAATATTAGAT AATTTTGCATAGTACTTACTTTATTCAGCTTACACAATTATTGGCTACAAGTTTTGTTTTGTGAAGCAAATACAAAGTGTGTATGCATTGGAAAAGAGGT GGTGATGTCACACACAGCCTAGCAAACAAACCATGTTACTTGCAGCCATTGTTAACAAATTCTATCATACCACGACACACGACATAAACGCAGATCTCTG CAACTATCCTACTTGATAAGGGCCATGTTTCCAAAACATATGTATAAAACAAAAATAATAATTGTTCTTTGTGTATATCAATTCTTCCCCTCTACTTGAA ATTTTAAATCTTAATCAAATTTATTTTATCTCTAATAACAAAGTAAAATCTTTATTCAATAGCTAATGTTTTCCACGTGTAAAAGATTAAGTGGTCCAAG TGTGTTTTACTTCCCCTTCTAGCATCCGAATCTGATCATAGTGGGACTAATAACAAAACAGAACTCATTTGTGTTGTGTCTTTGTTTCATAATAGAAAGA CAGTTAAGTGGTACAAGTTTACAGTTACCTCTATAGTTAGCAACTAAAAAACATGTTATTGTGATGTTAGTGTTGTGTGATAGAGGAAGGTGGTGAAAAT GGATTTTTGGCCAGAATAT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_69351; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_132960
| Blastp | Acidic endochitinase from Vitis with 58.66% of identity |
|---|---|
| Blastx | Cysteine-rich receptor-like protein kinase 10 from Arabidopsis with 52.3% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (100233088) |
| CantataDB | Link to cantataDB annotations (CNT0001079) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019458282.1) |
| Pfam | Glycosyl hydrolases family 18 (PF00704.27) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |